EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002178 (Gene tree)
Gene ID: 289469
Gene Symbol: Mrps18c
Alias: LOC289469
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 6219 bases
Position: chr14:10440691-10446909
Accession: 1307997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000002962	Ribosomal_S18	PF01084.20	4e-23	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000002962	-	809	-	ENSRNOP00000002962	143 (aa)	-	D4A4V1

Gene Model

Click here to download ENSRNOG00000002178's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002178	Mrps18c	100	76.027	ENSG00000163319	MRPS18C	100	76.027	Homo_sapiens
ENSRNOG00000002178	Mrps18c	100	70.548	ENSAMEG00000004915	MRPS18C	100	70.548	Ailuropoda_melanoleuca
ENSRNOG00000002178	Mrps18c	99	63.816	ENSANAG00000025323	-	95	63.816	Aotus_nancymaae
ENSRNOG00000002178	Mrps18c	100	66.438	ENSANAG00000028055	-	100	66.438	Aotus_nancymaae
ENSRNOG00000002178	Mrps18c	100	51.370	ENSBTAG00000049836	-	100	51.370	Bos_taurus
ENSRNOG00000002178	Mrps18c	100	76.712	ENSBTAG00000018155	MRPS18C	100	76.712	Bos_taurus
ENSRNOG00000002178	Mrps18c	100	76.027	ENSCJAG00000042247	MRPS18C	97	76.027	Callithrix_jacchus
ENSRNOG00000002178	Mrps18c	100	78.082	ENSCAFG00020010491	MRPS18C	100	78.082	Canis_lupus_dingo
ENSRNOG00000002178	Mrps18c	75	67.290	ENSCHIG00000019359	-	98	67.290	Capra_hircus
ENSRNOG00000002178	Mrps18c	88	84.921	ENSCHIG00000004461	-	86	84.921	Capra_hircus
ENSRNOG00000002178	Mrps18c	99	62.585	ENSCHIG00000018805	-	99	62.585	Capra_hircus
ENSRNOG00000002178	Mrps18c	100	46.575	ENSCHIG00000016551	-	100	46.575	Capra_hircus
ENSRNOG00000002178	Mrps18c	100	66.438	ENSCHIG00000022740	-	100	66.438	Capra_hircus
ENSRNOG00000002178	Mrps18c	100	73.973	ENSTSYG00000012924	MRPS18C	100	73.973	Carlito_syrichta
ENSRNOG00000002178	Mrps18c	100	72.603	ENSCPOG00000009198	MRPS18C	100	72.603	Cavia_porcellus
ENSRNOG00000002178	Mrps18c	100	68.531	ENSCCAG00000028283	-	100	68.531	Cebus_capucinus
ENSRNOG00000002178	Mrps18c	98	63.636	ENSCCAG00000025155	-	93	63.636	Cebus_capucinus
ENSRNOG00000002178	Mrps18c	100	73.973	ENSCCAG00000019347	-	100	73.973	Cebus_capucinus
ENSRNOG00000002178	Mrps18c	100	76.027	ENSCCAG00000026577	-	100	76.027	Cebus_capucinus
ENSRNOG00000002178	Mrps18c	100	76.712	ENSCATG00000040697	MRPS18C	100	76.712	Cercocebus_atys
ENSRNOG00000002178	Mrps18c	100	73.288	ENSCLAG00000017397	-	100	73.288	Chinchilla_lanigera
ENSRNOG00000002178	Mrps18c	100	74.658	ENSCLAG00000008205	-	100	74.658	Chinchilla_lanigera
ENSRNOG00000002178	Mrps18c	100	65.753	ENSCANG00000041165	-	100	65.753	Colobus_angolensis_palliatus
ENSRNOG00000002178	Mrps18c	100	53.147	ENSCANG00000037347	-	100	53.147	Colobus_angolensis_palliatus
ENSRNOG00000002178	Mrps18c	100	76.712	ENSCANG00000038907	MRPS18C	100	76.712	Colobus_angolensis_palliatus
ENSRNOG00000002178	Mrps18c	100	80.420	ENSCGRG00001000103	Mrps18c	100	80.420	Cricetulus_griseus_chok1gshd
ENSRNOG00000002178	Mrps18c	100	80.420	ENSCGRG00000002192	Mrps18c	100	80.420	Cricetulus_griseus_crigri
ENSRNOG00000002178	Mrps18c	99	76.389	ENSDORG00000012749	Mrps18c	100	76.389	Dipodomys_ordii
ENSRNOG00000002178	Mrps18c	100	51.370	ENSETEG00000012223	-	100	51.370	Echinops_telfairi
ENSRNOG00000002178	Mrps18c	100	80.690	ENSEASG00005013234	MRPS18C	100	80.690	Equus_asinus_asinus
ENSRNOG00000002178	Mrps18c	100	80.000	ENSECAG00000020387	MRPS18C	100	80.000	Equus_caballus
ENSRNOG00000002178	Mrps18c	100	55.782	ENSEEUG00000003504	MRPS18C	99	55.782	Erinaceus_europaeus
ENSRNOG00000002178	Mrps18c	100	78.767	ENSFCAG00000042464	MRPS18C	100	78.767	Felis_catus
ENSRNOG00000002178	Mrps18c	100	64.384	ENSFDAG00000008778	-	100	64.384	Fukomys_damarensis
ENSRNOG00000002178	Mrps18c	100	73.288	ENSFDAG00000000250	-	100	73.288	Fukomys_damarensis
ENSRNOG00000002178	Mrps18c	100	54.795	ENSGGOG00000040785	-	100	54.795	Gorilla_gorilla
ENSRNOG00000002178	Mrps18c	100	61.644	ENSGGOG00000008603	MRPS18C	100	61.644	Gorilla_gorilla
ENSRNOG00000002178	Mrps18c	100	51.370	ENSGGOG00000037903	-	100	51.370	Gorilla_gorilla
ENSRNOG00000002178	Mrps18c	100	70.548	ENSHGLG00000020134	-	100	70.548	Heterocephalus_glaber_female
ENSRNOG00000002178	Mrps18c	100	69.231	ENSHGLG00000012671	-	98	69.231	Heterocephalus_glaber_female
ENSRNOG00000002178	Mrps18c	100	77.397	ENSHGLG00000002953	-	100	77.397	Heterocephalus_glaber_female
ENSRNOG00000002178	Mrps18c	100	69.231	ENSHGLG00100015568	-	98	69.231	Heterocephalus_glaber_male
ENSRNOG00000002178	Mrps18c	100	77.397	ENSHGLG00100016235	-	100	77.397	Heterocephalus_glaber_male
ENSRNOG00000002178	Mrps18c	100	70.548	ENSHGLG00100019678	-	100	70.548	Heterocephalus_glaber_male
ENSRNOG00000002178	Mrps18c	100	77.241	ENSSTOG00000007989	MRPS18C	100	77.241	Ictidomys_tridecemlineatus
ENSRNOG00000002178	Mrps18c	50	87.500	ENSJJAG00000022437	Mrps18c	74	87.500	Jaculus_jaculus
ENSRNOG00000002178	Mrps18c	100	75.342	ENSLAFG00000001059	MRPS18C	100	75.342	Loxodonta_africana
ENSRNOG00000002178	Mrps18c	100	57.931	ENSMFAG00000041276	-	100	57.931	Macaca_fascicularis
ENSRNOG00000002178	Mrps18c	100	76.027	ENSMFAG00000003991	MRPS18C	100	76.027	Macaca_fascicularis
ENSRNOG00000002178	Mrps18c	100	68.493	ENSMMUG00000048717	-	100	68.493	Macaca_mulatta
ENSRNOG00000002178	Mrps18c	100	63.448	ENSMMUG00000039146	-	100	63.448	Macaca_mulatta
ENSRNOG00000002178	Mrps18c	100	58.904	ENSMMUG00000015353	MRPS18C	100	58.904	Macaca_mulatta
ENSRNOG00000002178	Mrps18c	100	76.027	ENSMNEG00000043663	MRPS18C	100	76.027	Macaca_nemestrina
ENSRNOG00000002178	Mrps18c	100	56.643	ENSMNEG00000018700	-	100	56.643	Macaca_nemestrina
ENSRNOG00000002178	Mrps18c	100	76.712	ENSMLEG00000038884	MRPS18C	100	76.712	Mandrillus_leucophaeus
ENSRNOG00000002178	Mrps18c	100	74.658	ENSMICG00000032609	-	100	74.658	Microcebus_murinus
ENSRNOG00000002178	Mrps18c	100	57.534	ENSMICG00000037615	-	100	57.534	Microcebus_murinus
ENSRNOG00000002178	Mrps18c	100	79.021	ENSMOCG00000009898	-	100	79.021	Microtus_ochrogaster
ENSRNOG00000002178	Mrps18c	100	81.818	ENSMOCG00000015591	-	100	81.818	Microtus_ochrogaster
ENSRNOG00000002178	Mrps18c	88	75.397	ENSMODG00000020773	MRPS18C	87	75.397	Monodelphis_domestica
ENSRNOG00000002178	Mrps18c	100	90.909	MGP_CAROLIEiJ_G0027458	Mrps18c	100	90.909	Mus_caroli
ENSRNOG00000002178	Mrps18c	100	90.909	ENSMUSG00000016833	Mrps18c	100	90.909	Mus_musculus
ENSRNOG00000002178	Mrps18c	100	92.308	MGP_PahariEiJ_G0017236	Mrps18c	100	92.308	Mus_pahari
ENSRNOG00000002178	Mrps18c	83	90.756	MGP_SPRETEiJ_G0028455	Mrps18c	93	90.756	Mus_spretus
ENSRNOG00000002178	Mrps18c	100	75.000	ENSMLUG00000017057	MRPS18C	100	75.000	Myotis_lucifugus
ENSRNOG00000002178	Mrps18c	91	83.077	ENSNGAG00000015980	Mrps18c	100	79.720	Nannospalax_galili
ENSRNOG00000002178	Mrps18c	100	76.027	ENSNLEG00000009119	MRPS18C	100	76.027	Nomascus_leucogenys
ENSRNOG00000002178	Mrps18c	100	69.178	ENSNLEG00000018188	-	100	69.178	Nomascus_leucogenys
ENSRNOG00000002178	Mrps18c	69	67.000	ENSOPRG00000004113	MRPS18C	68	67.000	Ochotona_princeps
ENSRNOG00000002178	Mrps18c	100	73.973	ENSODEG00000020349	-	100	73.973	Octodon_degus
ENSRNOG00000002178	Mrps18c	100	74.658	ENSODEG00000007599	-	100	74.658	Octodon_degus
ENSRNOG00000002178	Mrps18c	100	76.027	ENSOARG00000002770	MRPS18C	100	76.027	Ovis_aries
ENSRNOG00000002178	Mrps18c	100	52.740	ENSPPAG00000037400	-	100	52.740	Pan_paniscus
ENSRNOG00000002178	Mrps18c	100	76.027	ENSPPAG00000037122	MRPS18C	100	76.027	Pan_paniscus
ENSRNOG00000002178	Mrps18c	100	78.082	ENSPPRG00000011089	MRPS18C	100	78.082	Panthera_pardus
ENSRNOG00000002178	Mrps18c	100	77.397	ENSPTIG00000021242	MRPS18C	100	77.397	Panthera_tigris_altaica
ENSRNOG00000002178	Mrps18c	100	76.027	ENSPTRG00000016233	MRPS18C	100	76.027	Pan_troglodytes
ENSRNOG00000002178	Mrps18c	100	50.685	ENSPTRG00000047058	-	100	50.685	Pan_troglodytes
ENSRNOG00000002178	Mrps18c	100	76.027	ENSPANG00000033931	MRPS18C	100	76.027	Papio_anubis
ENSRNOG00000002178	Mrps18c	100	63.448	ENSPANG00000034202	-	100	63.448	Papio_anubis
ENSRNOG00000002178	Mrps18c	100	79.720	ENSPEMG00000008390	Mrps18c	100	79.720	Peromyscus_maniculatus_bairdii
ENSRNOG00000002178	Mrps18c	99	69.718	ENSPCIG00000005376	-	100	69.718	Phascolarctos_cinereus
ENSRNOG00000002178	Mrps18c	77	69.091	ENSPCIG00000000097	-	78	69.091	Phascolarctos_cinereus
ENSRNOG00000002178	Mrps18c	71	86.275	ENSPCIG00000019737	-	100	86.275	Phascolarctos_cinereus
ENSRNOG00000002178	Mrps18c	100	77.397	ENSPPYG00000025867	MRPS18C	100	77.397	Pongo_abelii
ENSRNOG00000002178	Mrps18c	99	71.528	ENSPPYG00000025835	-	99	71.528	Pongo_abelii
ENSRNOG00000002178	Mrps18c	100	77.397	ENSPCAG00000004975	MRPS18C	100	77.397	Procavia_capensis
ENSRNOG00000002178	Mrps18c	100	78.767	ENSPCOG00000017634	MRPS18C	100	78.767	Propithecus_coquereli
ENSRNOG00000002178	Mrps18c	69	68.317	ENSPVAG00000006439	MRPS18C	100	68.317	Pteropus_vampyrus
ENSRNOG00000002178	Mrps18c	100	50.685	ENSRBIG00000031637	-	100	50.685	Rhinopithecus_bieti
ENSRNOG00000002178	Mrps18c	100	69.231	ENSRBIG00000035023	-	100	69.231	Rhinopithecus_bieti
ENSRNOG00000002178	Mrps18c	100	76.712	ENSRBIG00000041685	MRPS18C	100	76.712	Rhinopithecus_bieti
ENSRNOG00000002178	Mrps18c	100	76.712	ENSRROG00000044334	MRPS18C	100	76.712	Rhinopithecus_roxellana
ENSRNOG00000002178	Mrps18c	100	69.231	ENSRROG00000033834	-	100	69.231	Rhinopithecus_roxellana
ENSRNOG00000002178	Mrps18c	51	79.452	ENSRROG00000030722	-	67	79.452	Rhinopithecus_roxellana
ENSRNOG00000002178	Mrps18c	99	62.676	ENSSBOG00000032292	-	100	65.468	Saimiri_boliviensis_boliviensis
ENSRNOG00000002178	Mrps18c	100	59.310	ENSSBOG00000029234	-	100	59.310	Saimiri_boliviensis_boliviensis
ENSRNOG00000002178	Mrps18c	99	68.966	ENSSBOG00000022205	-	92	68.966	Saimiri_boliviensis_boliviensis
ENSRNOG00000002178	Mrps18c	100	76.712	ENSSBOG00000027568	-	100	76.712	Saimiri_boliviensis_boliviensis
ENSRNOG00000002178	Mrps18c	93	74.436	ENSSHAG00000007084	MRPS18C	85	74.436	Sarcophilus_harrisii
ENSRNOG00000002178	Mrps18c	100	76.712	ENSSSCG00000038042	MRPS18C	100	76.712	Sus_scrofa
ENSRNOG00000002178	Mrps18c	100	78.767	ENSTBEG00000012505	MRPS18C	100	78.767	Tupaia_belangeri
ENSRNOG00000002178	Mrps18c	100	79.452	ENSTTRG00000004897	MRPS18C	100	79.452	Tursiops_truncatus
ENSRNOG00000002178	Mrps18c	100	78.767	ENSUAMG00000012878	MRPS18C	100	78.767	Ursus_americanus
ENSRNOG00000002178	Mrps18c	100	78.767	ENSUMAG00000008829	MRPS18C	100	78.767	Ursus_maritimus
ENSRNOG00000002178	Mrps18c	100	79.452	ENSVPAG00000011358	MRPS18C	100	79.452	Vicugna_pacos
ENSRNOG00000002178	Mrps18c	100	78.082	ENSVVUG00000015672	MRPS18C	100	78.082	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0006412	translation	-	IEA	Process
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function