EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000002232 (Gene tree)
Gene ID
305152
Gene Symbol
Aff1
Alias
LOC305152|Mllt2
Full Name
AF4/FMR2 family%2C member 1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
158291 bases
Position
chr14:7226586-7384876
Accession
1307940
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000071392AF-4PF05110.13011
ENSRNOP00000062389AF-4PF05110.13011
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000066071-4660-ENSRNOP000000623891170 (aa)-D3ZBU5
ENSRNOT00000086694-4087XM_006250632ENSRNOP000000713921223 (aa)XP_006250694A0A0G2K0C8
Gene Model
Click here to download ENSRNOG00000002232's gene model file
Pathways
Pathway IDPathway NameSource
rno05202Transcriptional misregulation in cancerKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002232's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000002232Aff19967.175ENSG00000172493AFF110068.675Homo_sapiens
ENSRNOG00000002232Aff16444.056ENSG00000155966AFF29031.364Homo_sapiens
ENSRNOG00000002232Aff15338.880ENSG00000072364AFF49443.229Homo_sapiens
ENSRNOG00000002232Aff19967.334ENSAMEG00000003337AFF110067.628Ailuropoda_melanoleuca
ENSRNOG00000002232Aff15930.890ENSACIG00000010525aff49130.628Amphilophus_citrinellus
ENSRNOG00000002232Aff19950.238ENSAPLG00000004059AFF110050.318Anas_platyrhynchos
ENSRNOG00000002232Aff19947.508ENSACAG00000012192AFF19946.880Anolis_carolinensis
ENSRNOG00000002232Aff19967.788ENSANAG00000017095AFF110068.974Aotus_nancymaae
ENSRNOG00000002232Aff18247.701ENSANAG00000023509AFF26242.395Aotus_nancymaae
ENSRNOG00000002232Aff16441.304ENSAMXG00000020137aff47835.692Astyanax_mexicanus
ENSRNOG00000002232Aff18744.014ENSBTAG00000020750AFF26141.694Bos_taurus
ENSRNOG00000002232Aff15238.969ENSCJAG00000013322AFF45740.768Callithrix_jacchus
ENSRNOG00000002232Aff18844.056ENSCJAG00000000061AFF26242.071Callithrix_jacchus
ENSRNOG00000002232Aff19967.788ENSCJAG00000006047AFF110068.099Callithrix_jacchus
ENSRNOG00000002232Aff15138.512ENSCAFG00000000930AFF45540.625Canis_familiaris
ENSRNOG00000002232Aff19966.027ENSCAFG00000009476AFF110067.468Canis_familiaris
ENSRNOG00000002232Aff17063.409ENSTSYG00000002039AFF110063.810Carlito_syrichta
ENSRNOG00000002232Aff16751.724ENSCAPG00000012999AFF36151.724Cavia_aperea
ENSRNOG00000002232Aff19954.545ENSCAPG00000006540AFF110055.537Cavia_aperea
ENSRNOG00000002232Aff15236.715ENSCPOG00000001814AFF45762.319Cavia_porcellus
ENSRNOG00000002232Aff19957.680ENSCPOG00000034568AFF19958.734Cavia_porcellus
ENSRNOG00000002232Aff16751.724ENSCPOG00000006346AFF37554.545Cavia_porcellus
ENSRNOG00000002232Aff19964.337ENSCCAG00000027623AFF19968.148Cebus_capucinus
ENSRNOG00000002232Aff18744.406ENSCCAG00000025994AFF26242.395Cebus_capucinus
ENSRNOG00000002232Aff17235.274ENSCCAG00000030353AFF45639.227Cebus_capucinus
ENSRNOG00000002232Aff19968.990ENSCATG00000039501AFF110069.610Cercocebus_atys
ENSRNOG00000002232Aff17838.749ENSCATG00000044510AFF47834.549Cercocebus_atys
ENSRNOG00000002232Aff16444.056ENSCATG00000040342AFF26241.748Cercocebus_atys
ENSRNOG00000002232Aff19958.740ENSCLAG00000005537AFF110059.055Chinchilla_lanigera
ENSRNOG00000002232Aff16954.023ENSCLAG00000017100AFF38653.409Chinchilla_lanigera
ENSRNOG00000002232Aff16544.056ENSCSAG00000007248AFF26241.748Chlorocebus_sabaeus
ENSRNOG00000002232Aff19968.910ENSCSAG00000004333AFF19969.823Chlorocebus_sabaeus
ENSRNOG00000002232Aff17773.967ENSCHOG00000000041AFF17774.380Choloepus_hoffmanni
ENSRNOG00000002232Aff15144.656ENSCHOG00000003138AFF45444.987Choloepus_hoffmanni
ENSRNOG00000002232Aff19951.987ENSCPBG00000005382AFF110052.411Chrysemys_picta_bellii
ENSRNOG00000002232Aff16444.056ENSCANG00000029116AFF26241.748Colobus_angolensis_palliatus
ENSRNOG00000002232Aff19968.800ENSCANG00000037514AFF110069.341Colobus_angolensis_palliatus
ENSRNOG00000002232Aff16444.406ENSCGRG00001012965Aff26142.071Cricetulus_griseus_chok1gshd
ENSRNOG00000002232Aff19978.751ENSCGRG00001015769Aff19978.943Cricetulus_griseus_chok1gshd
ENSRNOG00000002232Aff17275.448ENSCGRG00000004837Aff110075.000Cricetulus_griseus_crigri
ENSRNOG00000002232Aff16444.406ENSCGRG00000000059Aff26242.071Cricetulus_griseus_crigri
ENSRNOG00000002232Aff18246.552ENSDNOG00000013755AFF26241.424Dasypus_novemcinctus
ENSRNOG00000002232Aff17266.815ENSDNOG00000048783-10069.265Dasypus_novemcinctus
ENSRNOG00000002232Aff19966.586ENSDORG00000013881Aff110067.126Dipodomys_ordii
ENSRNOG00000002232Aff16646.552ENSDORG00000015215Aff28641.694Dipodomys_ordii
ENSRNOG00000002232Aff19378.571ENSETEG00000014905AFF19959.073Echinops_telfairi
ENSRNOG00000002232Aff15755.932ENSEBUG00000012097aff45654.795Eptatretus_burgeri
ENSRNOG00000002232Aff15038.596ENSEASG00005013954AFF25036.688Equus_asinus_asinus
ENSRNOG00000002232Aff19967.014ENSEASG00005012760AFF110067.276Equus_asinus_asinus
ENSRNOG00000002232Aff15137.829ENSEASG00005018361AFF47937.336Equus_asinus_asinus
ENSRNOG00000002232Aff15137.829ENSECAG00000011969AFF47937.437Equus_caballus
ENSRNOG00000002232Aff19967.548ENSECAG00000003619AFF110067.911Equus_caballus
ENSRNOG00000002232Aff17595.000ENSEEUG00000013664-7495.000Erinaceus_europaeus
ENSRNOG00000002232Aff19963.701ENSFCAG00000029806AFF19964.916Felis_catus
ENSRNOG00000002232Aff19945.699ENSFALG00000005554AFF19945.282Ficedula_albicollis
ENSRNOG00000002232Aff17838.263ENSFDAG00000005342AFF46438.195Fukomys_damarensis
ENSRNOG00000002232Aff19961.365ENSFDAG00000018846AFF110061.129Fukomys_damarensis
ENSRNOG00000002232Aff17835.494ENSFHEG00000004526aff47835.246Fundulus_heteroclitus
ENSRNOG00000002232Aff18652.688ENSGALG00000016767AFF35154.545Gallus_gallus
ENSRNOG00000002232Aff19061.333ENSGALG00000043935AFF19850.000Gallus_gallus
ENSRNOG00000002232Aff17837.475ENSGACG00000020734aff47936.858Gasterosteus_aculeatus
ENSRNOG00000002232Aff18559.677ENSGACG00000016333-6059.677Gasterosteus_aculeatus
ENSRNOG00000002232Aff17837.400ENSGAGG00000020214AFF49935.187Gopherus_agassizii
ENSRNOG00000002232Aff19968.058ENSGGOG00000008497AFF110068.685Gorilla_gorilla
ENSRNOG00000002232Aff18247.126ENSGGOG00000010543AFF26241.748Gorilla_gorilla
ENSRNOG00000002232Aff15338.880ENSGGOG00000011786AFF49932.544Gorilla_gorilla
ENSRNOG00000002232Aff19961.489ENSHGLG00000001384AFF19962.220Heterocephalus_glaber_female
ENSRNOG00000002232Aff15238.325ENSHGLG00000006661AFF46437.901Heterocephalus_glaber_female
ENSRNOG00000002232Aff15238.325ENSHGLG00100018576AFF46437.901Heterocephalus_glaber_male
ENSRNOG00000002232Aff19959.676ENSHGLG00100016607AFF110060.552Heterocephalus_glaber_male
ENSRNOG00000002232Aff15246.748ENSHCOG00000016280aff48944.898Hippocampus_comes
ENSRNOG00000002232Aff15846.552ENSSTOG00000004799AFF25442.424Ictidomys_tridecemlineatus
ENSRNOG00000002232Aff19970.813ENSSTOG00000006530AFF110071.850Ictidomys_tridecemlineatus
ENSRNOG00000002232Aff17738.245ENSSTOG00000026695AFF45961.111Ictidomys_tridecemlineatus
ENSRNOG00000002232Aff15847.701ENSJJAG00000022176Aff26142.071Jaculus_jaculus
ENSRNOG00000002232Aff19970.579ENSJJAG00000022877Aff19970.881Jaculus_jaculus
ENSRNOG00000002232Aff18554.023ENSJJAG00000013155Aff37557.143Jaculus_jaculus
ENSRNOG00000002232Aff17836.409ENSLBEG00000017778aff45642.268Labrus_bergylta
ENSRNOG00000002232Aff19946.434ENSLACG00000007303AFF19947.138Latimeria_chalumnae
ENSRNOG00000002232Aff15446.371ENSLACG00000010860aff26950.201Latimeria_chalumnae
ENSRNOG00000002232Aff17838.934ENSLACG00000008849AFF49935.987Latimeria_chalumnae
ENSRNOG00000002232Aff15236.991ENSLOCG00000010610aff47836.281Lepisosteus_oculatus
ENSRNOG00000002232Aff16147.126ENSLAFG00000018691AFF28841.611Loxodonta_africana
ENSRNOG00000002232Aff19969.071ENSMFAG00000037700AFF110069.690Macaca_fascicularis
ENSRNOG00000002232Aff16444.056ENSMFAG00000044807AFF26241.748Macaca_fascicularis
ENSRNOG00000002232Aff17838.648ENSMFAG00000034615AFF47937.348Macaca_fascicularis
ENSRNOG00000002232Aff19968.990ENSMMUG00000014076AFF19969.904Macaca_mulatta
ENSRNOG00000002232Aff17838.648ENSMMUG00000015640AFF47937.348Macaca_mulatta
ENSRNOG00000002232Aff16444.056ENSMMUG00000000466AFF26241.748Macaca_mulatta
ENSRNOG00000002232Aff19968.910ENSMNEG00000031536AFF110069.610Macaca_nemestrina
ENSRNOG00000002232Aff16444.056ENSMNEG00000035909AFF26241.748Macaca_nemestrina
ENSRNOG00000002232Aff17838.648ENSMNEG00000033381AFF47937.348Macaca_nemestrina
ENSRNOG00000002232Aff19968.910ENSMLEG00000039099AFF110069.610Mandrillus_leucophaeus
ENSRNOG00000002232Aff17836.391ENSMLEG00000028953AFF47835.657Mandrillus_leucophaeus
ENSRNOG00000002232Aff16444.056ENSMLEG00000038832AFF26241.748Mandrillus_leucophaeus
ENSRNOG00000002232Aff17036.830ENSMAMG00000016189-5742.857Mastacembelus_armatus
ENSRNOG00000002232Aff19946.135ENSMGAG00000007646AFF19946.369Meleagris_gallopavo
ENSRNOG00000002232Aff16033.858ENSMGAG00000008246-6744.030Meleagris_gallopavo
ENSRNOG00000002232Aff17745.070ENSMAUG00000013669Aff45345.070Mesocricetus_auratus
ENSRNOG00000002232Aff16444.014ENSMAUG00000015604Aff26141.694Mesocricetus_auratus
ENSRNOG00000002232Aff19978.314ENSMAUG00000010241Aff110077.859Mesocricetus_auratus
ENSRNOG00000002232Aff16953.237ENSMICG00000028855-8653.469Microcebus_murinus
ENSRNOG00000002232Aff19975.632ENSMOCG00000017389Aff19976.039Microtus_ochrogaster
ENSRNOG00000002232Aff19950.521ENSMODG00000020745AFF19750.520Monodelphis_domestica
ENSRNOG00000002232Aff17833.805ENSMODG00000005570AFF26032.539Monodelphis_domestica
ENSRNOG00000002232Aff16262.121ENSMALG00000017690aff46862.121Monopterus_albus
ENSRNOG00000002232Aff19983.143MGP_CAROLIEiJ_G0027469Aff19984.735Mus_caroli
ENSRNOG00000002232Aff17737.695MGP_CAROLIEiJ_G0016331Aff45959.722Mus_caroli
ENSRNOG00000002232Aff19984.339ENSMUSG00000029313Aff19984.628Mus_musculus
ENSRNOG00000002232Aff19984.370MGP_PahariEiJ_G0017247Aff19984.452Mus_pahari
ENSRNOG00000002232Aff17137.237MGP_SPRETEiJ_G0017175Aff45959.722Mus_spretus
ENSRNOG00000002232Aff19985.761MGP_SPRETEiJ_G0028466Aff19789.130Mus_spretus
ENSRNOG00000002232Aff15138.651ENSMPUG00000010316AFF47936.108Mustela_putorius_furo
ENSRNOG00000002232Aff19966.906ENSMPUG00000002270AFF19967.066Mustela_putorius_furo
ENSRNOG00000002232Aff19965.760ENSMLUG00000000293AFF110065.360Myotis_lucifugus
ENSRNOG00000002232Aff17737.819ENSMLUG00000015081AFF47937.286Myotis_lucifugus
ENSRNOG00000002232Aff17738.389ENSNGAG00000019867Aff47037.471Nannospalax_galili
ENSRNOG00000002232Aff19965.308ENSNLEG00000009429AFF19966.479Nomascus_leucogenys
ENSRNOG00000002232Aff16444.056ENSNLEG00000013346AFF26241.748Nomascus_leucogenys
ENSRNOG00000002232Aff15338.880ENSNLEG00000012874AFF47937.082Nomascus_leucogenys
ENSRNOG00000002232Aff19962.770ENSOPRG00000017154-9963.002Ochotona_princeps
ENSRNOG00000002232Aff17060.976ENSOPRG00000014519AFF45960.976Ochotona_princeps
ENSRNOG00000002232Aff19364.000ENSODEG00000007407AFF110064.000Octodon_degus
ENSRNOG00000002232Aff17837.285ENSODEG00000008137AFF47937.033Octodon_degus
ENSRNOG00000002232Aff16443.706ENSODEG00000009737AFF26141.424Octodon_degus
ENSRNOG00000002232Aff19951.752ENSOANG00000013624AFF19952.257Ornithorhynchus_anatinus
ENSRNOG00000002232Aff15544.776ENSOANG00000001095-7345.556Ornithorhynchus_anatinus
ENSRNOG00000002232Aff18744.056ENSOCUG00000013873AFF26241.748Oryctolagus_cuniculus
ENSRNOG00000002232Aff19965.394ENSOCUG00000002105AFF19765.685Oryctolagus_cuniculus
ENSRNOG00000002232Aff16162.295ENSORLG00020003991-5362.295Oryzias_latipes_hni
ENSRNOG00000002232Aff17254.097ENSOGAG00000031211-9955.393Otolemur_garnettii
ENSRNOG00000002232Aff19961.795ENSOGAG00000009622-10060.777Otolemur_garnettii
ENSRNOG00000002232Aff19965.867ENSOARG00000004522AFF110065.707Ovis_aries
ENSRNOG00000002232Aff18844.056ENSOARG00000009528AFF26041.748Ovis_aries
ENSRNOG00000002232Aff16444.056ENSPPAG00000040251AFF26241.748Pan_paniscus
ENSRNOG00000002232Aff19968.193ENSPPAG00000029196AFF110068.820Pan_paniscus
ENSRNOG00000002232Aff15338.880ENSPPAG00000043255AFF47937.310Pan_paniscus
ENSRNOG00000002232Aff19963.840ENSPPRG00000023590AFF19965.144Panthera_pardus
ENSRNOG00000002232Aff18167.276ENSPTIG00000011838AFF19969.715Panthera_tigris_altaica
ENSRNOG00000002232Aff19968.112ENSPTRG00000016255AFF110073.333Pan_troglodytes
ENSRNOG00000002232Aff16444.056ENSPTRG00000022353AFF26241.748Pan_troglodytes
ENSRNOG00000002232Aff15338.880ENSPTRG00000017228AFF47937.310Pan_troglodytes
ENSRNOG00000002232Aff17832.771ENSPTRG00000046486-7937.310Pan_troglodytes
ENSRNOG00000002232Aff19865.989ENSPANG00000016722AFF19966.748Papio_anubis
ENSRNOG00000002232Aff16444.056ENSPANG00000002926AFF26241.748Papio_anubis
ENSRNOG00000002232Aff17838.648ENSPANG00000007039AFF47937.348Papio_anubis
ENSRNOG00000002232Aff18235.048ENSPKIG00000024249AFF45037.161Paramormyrops_kingsleyae
ENSRNOG00000002232Aff19950.804ENSPSIG00000003759AFF19951.532Pelodiscus_sinensis
ENSRNOG00000002232Aff15337.579ENSPSIG00000013003AFF49934.603Pelodiscus_sinensis
ENSRNOG00000002232Aff19976.648ENSPEMG00000000785Aff19978.879Peromyscus_maniculatus_bairdii
ENSRNOG00000002232Aff19082.143ENSPCIG00000011395AFF19975.758Phascolarctos_cinereus
ENSRNOG00000002232Aff18549.333ENSPCIG00000030054AFF26949.333Phascolarctos_cinereus
ENSRNOG00000002232Aff15338.720ENSPPYG00000015775AFF47937.209Pongo_abelii
ENSRNOG00000002232Aff19966.854ENSPPYG00000014910AFF19968.010Pongo_abelii
ENSRNOG00000002232Aff16444.056ENSPPYG00000020800AFF26141.748Pongo_abelii
ENSRNOG00000002232Aff17584.444ENSPCAG00000005658AFF17390.476Procavia_capensis
ENSRNOG00000002232Aff19762.612ENSPCOG00000027339AFF19862.551Propithecus_coquereli
ENSRNOG00000002232Aff19067.166ENSPVAG00000014455AFF19666.310Pteropus_vampyrus
ENSRNOG00000002232Aff19969.255ENSRBIG00000032242AFF110069.451Rhinopithecus_bieti
ENSRNOG00000002232Aff19969.071ENSRROG00000045716AFF110069.531Rhinopithecus_roxellana
ENSRNOG00000002232Aff15238.808ENSSBOG00000021562AFF45639.305Saimiri_boliviensis_boliviensis
ENSRNOG00000002232Aff18744.755ENSSBOG00000020604AFF26242.718Saimiri_boliviensis_boliviensis
ENSRNOG00000002232Aff19967.657ENSSBOG00000035401AFF110068.446Saimiri_boliviensis_boliviensis
ENSRNOG00000002232Aff19952.073ENSSHAG00000004203AFF19951.633Sarcophilus_harrisii
ENSRNOG00000002232Aff15149.333ENSSHAG00000009556AFF26544.737Sarcophilus_harrisii
ENSRNOG00000002232Aff15934.812ENSSFOG00015000846AFF49132.980Scleropages_formosus
ENSRNOG00000002232Aff15653.571ENSSARG00000013296-7855.060Sorex_araneus
ENSRNOG00000002232Aff17835.075ENSSPUG00000012215AFF49934.661Sphenodon_punctatus
ENSRNOG00000002232Aff19950.949ENSSPUG00000001574AFF19950.831Sphenodon_punctatus
ENSRNOG00000002232Aff17137.515ENSSSCG00000014291AFF47936.879Sus_scrofa
ENSRNOG00000002232Aff15354.545ENSTGUG00000004690AFF25654.545Taeniopygia_guttata
ENSRNOG00000002232Aff15231.050ENSTGUG00000010075-8431.976Taeniopygia_guttata
ENSRNOG00000002232Aff19945.084ENSTGUG00000002726AFF110044.136Taeniopygia_guttata
ENSRNOG00000002232Aff15264.516ENSTRUG00000014005-5356.000Takifugu_rubripes
ENSRNOG00000002232Aff19967.846ENSTBEG00000007536AFF110067.524Tupaia_belangeri
ENSRNOG00000002232Aff19462.533ENSTTRG00000005595AFF19966.024Tursiops_truncatus
ENSRNOG00000002232Aff16444.406ENSTTRG00000013641AFF26242.071Tursiops_truncatus
ENSRNOG00000002232Aff18465.524ENSUAMG00000001919AFF19965.916Ursus_americanus
ENSRNOG00000002232Aff18067.484ENSUMAG00000025433AFF18670.826Ursus_maritimus
ENSRNOG00000002232Aff19967.014ENSVVUG00000009263AFF110067.673Vulpes_vulpes
ENSRNOG00000002232Aff17647.015ENSXETG00000019630aff27245.113Xenopus_tropicalis
ENSRNOG00000002232Aff16735.528ENSXETG00000004169aff46335.767Xenopus_tropicalis
ENSRNOG00000002232Aff16033.735ENSXCOG00000006385aff45338.689Xiphophorus_couchianus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0003690double-stranded DNA binding21873635.IBAFunction
GO:0003700DNA-binding transcription factor activity21873635.IBAFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus-ISOComponent
GO:0006355regulation of transcription, DNA-templated-IEAProcess
GO:0008023transcription elongation factor complex21873635.IBAComponent
GO:0008023transcription elongation factor complex-ISOComponent
GO:0008150biological_process-NDProcess
GO:0032783ELL-EAF complex21873635.IBAComponent
GO:0045893positive regulation of transcription, DNA-templated-ISOProcess

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us