EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002471 (Gene tree)
Gene ID: 288079
Gene Symbol: Polq
Alias: LOC288079
Full Name: DNA polymerase theta
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 109473 bases
Position: chr11:66585881-66695353
Accession: 1309795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000061230	DEAD	PF00270.29	8.9e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000063995	-	8527	XM_006248390	ENSRNOP00000061230	2547 (aa)	XP_006248452	D4A628

Gene Model

Click here to download ENSRNOG00000002471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002471	Polq	100	71.785	ENSG00000051341	POLQ	99	71.567	Homo_sapiens
ENSRNOG00000002471	Polq	64	66.351	ENSAPOG00000008650	polq	59	66.667	Acanthochromis_polyacanthus
ENSRNOG00000002471	Polq	100	70.968	ENSAMEG00000014870	POLQ	98	70.924	Ailuropoda_melanoleuca
ENSRNOG00000002471	Polq	64	66.391	ENSAOCG00000005817	polq	73	66.706	Amphiprion_ocellaris
ENSRNOG00000002471	Polq	64	66.157	ENSAPEG00000020432	polq	73	66.469	Amphiprion_percula
ENSRNOG00000002471	Polq	83	76.066	ENSAPLG00000014869	POLQ	86	76.128	Anas_platyrhynchos
ENSRNOG00000002471	Polq	79	68.977	ENSACAG00000011574	POLQ	93	69.390	Anolis_carolinensis
ENSRNOG00000002471	Polq	98	64.403	ENSANAG00000024407	POLQ	99	64.272	Aotus_nancymaae
ENSRNOG00000002471	Polq	64	66.114	ENSACLG00000013865	polq	57	66.114	Astatotilapia_calliptera
ENSRNOG00000002471	Polq	73	66.115	ENSAMXG00000004839	polq	63	66.115	Astyanax_mexicanus
ENSRNOG00000002471	Polq	93	80.422	ENSBTAG00000001920	POLQ	99	81.126	Bos_taurus
ENSRNOG00000002471	Polq	51	34.107	WBGene00020964	polq-1	70	34.140	Caenorhabditis_elegans
ENSRNOG00000002471	Polq	100	70.864	ENSCJAG00000008508	POLQ	99	70.785	Callithrix_jacchus
ENSRNOG00000002471	Polq	70	65.744	ENSCAFG00000011479	POLQ	99	65.744	Canis_familiaris
ENSRNOG00000002471	Polq	100	69.054	ENSCAFG00020005928	POLQ	99	69.323	Canis_lupus_dingo
ENSRNOG00000002471	Polq	100	69.792	ENSCHIG00000013841	POLQ	99	69.868	Capra_hircus
ENSRNOG00000002471	Polq	79	66.699	ENSTSYG00000009550	POLQ	96	66.472	Carlito_syrichta
ENSRNOG00000002471	Polq	92	65.426	ENSCCAG00000026574	POLQ	100	65.288	Cebus_capucinus
ENSRNOG00000002471	Polq	100	71.089	ENSCATG00000014007	POLQ	94	70.864	Cercocebus_atys
ENSRNOG00000002471	Polq	100	68.644	ENSCLAG00000008388	POLQ	99	68.667	Chinchilla_lanigera
ENSRNOG00000002471	Polq	100	68.133	ENSCSAG00000007239	POLQ	94	67.878	Chlorocebus_sabaeus
ENSRNOG00000002471	Polq	77	90.164	ENSCHOG00000005999	POLQ	76	90.164	Choloepus_hoffmanni
ENSRNOG00000002471	Polq	98	55.244	ENSCPBG00000001827	POLQ	99	55.283	Chrysemys_picta_bellii
ENSRNOG00000002471	Polq	98	71.284	ENSCANG00000032946	POLQ	98	71.045	Colobus_angolensis_palliatus
ENSRNOG00000002471	Polq	100	79.472	ENSCGRG00001013184	Polq	99	89.894	Cricetulus_griseus_chok1gshd
ENSRNOG00000002471	Polq	100	79.472	ENSCGRG00000001328	Polq	99	89.894	Cricetulus_griseus_crigri
ENSRNOG00000002471	Polq	64	64.636	ENSCSEG00000005068	polq	58	64.636	Cynoglossus_semilaevis
ENSRNOG00000002471	Polq	64	65.529	ENSCVAG00000019651	polq	75	65.833	Cyprinodon_variegatus
ENSRNOG00000002471	Polq	64	67.123	ENSDARG00000044622	polq	63	67.162	Danio_rerio
ENSRNOG00000002471	Polq	99	69.061	ENSDNOG00000009810	POLQ	99	69.007	Dasypus_novemcinctus
ENSRNOG00000002471	Polq	89	84.722	ENSDORG00000002416	Polq	99	87.166	Dipodomys_ordii
ENSRNOG00000002471	Polq	65	42.380	FBgn0002905	mus308	71	44.245	Drosophila_melanogaster
ENSRNOG00000002471	Polq	95	78.822	ENSETEG00000002958	POLQ	95	78.822	Echinops_telfairi
ENSRNOG00000002471	Polq	59	44.905	ENSEBUG00000007484	POLQ	55	44.964	Eptatretus_burgeri
ENSRNOG00000002471	Polq	100	67.281	ENSEASG00005014326	POLQ	95	87.688	Equus_asinus_asinus
ENSRNOG00000002471	Polq	100	71.527	ENSECAG00000014314	POLQ	99	71.429	Equus_caballus
ENSRNOG00000002471	Polq	82	90.164	ENSEEUG00000001047	POLQ	81	90.164	Erinaceus_europaeus
ENSRNOG00000002471	Polq	52	70.423	ENSELUG00000018460	polq	84	70.423	Esox_lucius
ENSRNOG00000002471	Polq	100	70.142	ENSFCAG00000023397	POLQ	99	70.143	Felis_catus
ENSRNOG00000002471	Polq	86	72.378	ENSFALG00000005269	POLQ	88	75.216	Ficedula_albicollis
ENSRNOG00000002471	Polq	100	68.435	ENSFDAG00000013705	POLQ	99	68.468	Fukomys_damarensis
ENSRNOG00000002471	Polq	65	65.318	ENSFHEG00000009685	polq	60	65.318	Fundulus_heteroclitus
ENSRNOG00000002471	Polq	76	63.520	ENSGMOG00000003509	polq	85	63.520	Gadus_morhua
ENSRNOG00000002471	Polq	85	66.402	ENSGALG00000014924	POLQ	81	73.799	Gallus_gallus
ENSRNOG00000002471	Polq	65	62.920	ENSGAFG00000004642	polq	60	62.920	Gambusia_affinis
ENSRNOG00000002471	Polq	69	63.807	ENSGACG00000016100	polq	92	66.419	Gasterosteus_aculeatus
ENSRNOG00000002471	Polq	90	68.817	ENSGAGG00000013573	POLQ	89	68.952	Gopherus_agassizii
ENSRNOG00000002471	Polq	91	84.471	ENSGGOG00000011565	POLQ	93	85.570	Gorilla_gorilla
ENSRNOG00000002471	Polq	64	66.468	ENSHBUG00000002672	polq	75	66.468	Haplochromis_burtoni
ENSRNOG00000002471	Polq	93	84.427	ENSHGLG00000012935	POLQ	99	78.521	Heterocephalus_glaber_female
ENSRNOG00000002471	Polq	100	69.535	ENSHGLG00100013873	POLQ	99	69.502	Heterocephalus_glaber_male
ENSRNOG00000002471	Polq	83	66.361	ENSIPUG00000001045	polq	80	66.361	Ictalurus_punctatus
ENSRNOG00000002471	Polq	100	72.248	ENSSTOG00000009954	POLQ	99	72.469	Ictidomys_tridecemlineatus
ENSRNOG00000002471	Polq	64	66.388	ENSKMAG00000000050	polq	73	66.388	Kryptolebias_marmoratus
ENSRNOG00000002471	Polq	84	67.532	ENSLOCG00000005709	polq	80	68.750	Lepisosteus_oculatus
ENSRNOG00000002471	Polq	85	67.282	ENSLAFG00000011574	POLQ	99	67.221	Loxodonta_africana
ENSRNOG00000002471	Polq	100	71.511	ENSMFAG00000001627	POLQ	99	71.274	Macaca_fascicularis
ENSRNOG00000002471	Polq	100	71.577	ENSMMUG00000007973	POLQ	99	71.340	Macaca_mulatta
ENSRNOG00000002471	Polq	100	71.511	ENSMNEG00000035186	POLQ	97	71.274	Macaca_nemestrina
ENSRNOG00000002471	Polq	92	78.118	ENSMLEG00000032728	POLQ	92	78.521	Mandrillus_leucophaeus
ENSRNOG00000002471	Polq	64	66.826	ENSMAMG00000000877	polq	57	66.826	Mastacembelus_armatus
ENSRNOG00000002471	Polq	64	65.995	ENSMZEG00005021576	polq	74	65.995	Maylandia_zebra
ENSRNOG00000002471	Polq	62	73.341	ENSMGAG00000014264	POLQ	80	73.397	Meleagris_gallopavo
ENSRNOG00000002471	Polq	100	72.097	ENSMICG00000049493	POLQ	97	72.244	Microcebus_murinus
ENSRNOG00000002471	Polq	100	77.829	ENSMOCG00000016969	Polq	99	88.770	Microtus_ochrogaster
ENSRNOG00000002471	Polq	64	65.718	ENSMMOG00000007373	polq	72	65.718	Mola_mola
ENSRNOG00000002471	Polq	98	58.088	ENSMODG00000018252	POLQ	100	57.933	Monodelphis_domestica
ENSRNOG00000002471	Polq	71	58.382	ENSMALG00000007491	polq	56	66.627	Monopterus_albus
ENSRNOG00000002471	Polq	100	87.822	MGP_CAROLIEiJ_G0020725	Polq	99	91.444	Mus_caroli
ENSRNOG00000002471	Polq	99	87.018	ENSMUSG00000034206	Polq	99	90.909	Mus_musculus
ENSRNOG00000002471	Polq	99	87.564	MGP_PahariEiJ_G0016426	Polq	99	91.444	Mus_pahari
ENSRNOG00000002471	Polq	99	87.293	MGP_SPRETEiJ_G0021625	Polq	99	90.374	Mus_spretus
ENSRNOG00000002471	Polq	96	70.311	ENSMPUG00000004980	POLQ	100	70.152	Mustela_putorius_furo
ENSRNOG00000002471	Polq	95	69.786	ENSMLUG00000007687	POLQ	100	69.625	Myotis_lucifugus
ENSRNOG00000002471	Polq	89	87.500	ENSNGAG00000024216	Polq	99	89.305	Nannospalax_galili
ENSRNOG00000002471	Polq	95	70.531	ENSNLEG00000005179	POLQ	100	70.285	Nomascus_leucogenys
ENSRNOG00000002471	Polq	66	80.455	ENSMEUG00000005314	-	69	81.193	Notamacropus_eugenii
ENSRNOG00000002471	Polq	82	90.164	ENSOPRG00000006048	POLQ	79	90.164	Ochotona_princeps
ENSRNOG00000002471	Polq	94	86.194	ENSODEG00000007851	POLQ	95	86.194	Octodon_degus
ENSRNOG00000002471	Polq	66	66.389	ENSONIG00000008937	polq	85	66.389	Oreochromis_niloticus
ENSRNOG00000002471	Polq	64	68.273	ENSOANG00000004437	-	87	68.072	Ornithorhynchus_anatinus
ENSRNOG00000002471	Polq	100	70.011	ENSOCUG00000008077	POLQ	99	69.973	Oryctolagus_cuniculus
ENSRNOG00000002471	Polq	65	63.574	ENSORLG00015004392	polq	67	66.667	Oryzias_latipes_hsok
ENSRNOG00000002471	Polq	68	60.606	ENSOMEG00000012947	polq	60	66.189	Oryzias_melastigma
ENSRNOG00000002471	Polq	100	69.877	ENSOGAG00000015795	POLQ	99	69.848	Otolemur_garnettii
ENSRNOG00000002471	Polq	100	69.301	ENSOARG00000020009	POLQ	94	69.255	Ovis_aries
ENSRNOG00000002471	Polq	100	71.812	ENSPPAG00000027313	POLQ	99	71.594	Pan_paniscus
ENSRNOG00000002471	Polq	100	70.875	ENSPPRG00000007014	POLQ	99	70.885	Panthera_pardus
ENSRNOG00000002471	Polq	100	69.682	ENSPTIG00000017074	POLQ	99	69.678	Panthera_tigris_altaica
ENSRNOG00000002471	Polq	100	71.812	ENSPTRG00000015276	POLQ	99	71.594	Pan_troglodytes
ENSRNOG00000002471	Polq	100	71.472	ENSPANG00000000759	POLQ	94	71.251	Papio_anubis
ENSRNOG00000002471	Polq	83	65.040	ENSPKIG00000015375	polq	86	65.040	Paramormyrops_kingsleyae
ENSRNOG00000002471	Polq	83	76.888	ENSPSIG00000013657	POLQ	93	64.811	Pelodiscus_sinensis
ENSRNOG00000002471	Polq	100	79.473	ENSPEMG00000017429	Polq	99	79.522	Peromyscus_maniculatus_bairdii
ENSRNOG00000002471	Polq	65	64.925	ENSPFOG00000019624	polq	64	64.925	Poecilia_formosa
ENSRNOG00000002471	Polq	51	64.692	ENSPLAG00000022900	polq	54	64.692	Poecilia_latipinna
ENSRNOG00000002471	Polq	67	61.972	ENSPREG00000006445	polq	60	64.925	Poecilia_reticulata
ENSRNOG00000002471	Polq	100	71.719	ENSPPYG00000013498	POLQ	99	71.501	Pongo_abelii
ENSRNOG00000002471	Polq	90	83.981	ENSPCOG00000024680	POLQ	99	83.981	Propithecus_coquereli
ENSRNOG00000002471	Polq	100	63.845	ENSPVAG00000003165	POLQ	94	63.929	Pteropus_vampyrus
ENSRNOG00000002471	Polq	72	68.005	ENSPNAG00000003089	polq	67	68.005	Pygocentrus_nattereri
ENSRNOG00000002471	Polq	97	84.507	ENSRBIG00000023391	POLQ	99	85.859	Rhinopithecus_bieti
ENSRNOG00000002471	Polq	100	71.204	ENSRROG00000045280	POLQ	99	71.003	Rhinopithecus_roxellana
ENSRNOG00000002471	Polq	98	59.084	ENSSHAG00000006984	POLQ	99	59.015	Sarcophilus_harrisii
ENSRNOG00000002471	Polq	70	68.192	ENSSFOG00015013674	polq	68	68.192	Scleropages_formosus
ENSRNOG00000002471	Polq	64	65.950	ENSSMAG00000011427	polq	58	65.950	Scophthalmus_maximus
ENSRNOG00000002471	Polq	64	66.069	ENSSDUG00000022307	polq	74	66.069	Seriola_dumerili
ENSRNOG00000002471	Polq	64	66.706	ENSSLDG00000024994	polq	73	66.706	Seriola_lalandi_dorsalis
ENSRNOG00000002471	Polq	88	90.000	ENSSARG00000001970	POLQ	90	86.441	Sorex_araneus
ENSRNOG00000002471	Polq	89	67.435	ENSSPUG00000004529	POLQ	93	67.363	Sphenodon_punctatus
ENSRNOG00000002471	Polq	65	66.547	ENSSPAG00000021010	polq	73	66.547	Stegastes_partitus
ENSRNOG00000002471	Polq	100	70.597	ENSSSCG00000036613	POLQ	99	70.488	Sus_scrofa
ENSRNOG00000002471	Polq	98	54.157	ENSTGUG00000013371	-	100	54.078	Taeniopygia_guttata
ENSRNOG00000002471	Polq	82	78.324	ENSTTRG00000001348	POLQ	78	78.324	Tursiops_truncatus
ENSRNOG00000002471	Polq	100	70.500	ENSUMAG00000025251	POLQ	98	70.700	Ursus_maritimus
ENSRNOG00000002471	Polq	95	84.966	ENSVVUG00000022390	POLQ	99	86.735	Vulpes_vulpes
ENSRNOG00000002471	Polq	83	71.380	ENSXETG00000009913	polq	83	71.469	Xenopus_tropicalis
ENSRNOG00000002471	Polq	65	65.041	ENSXMAG00000012597	polq	61	64.925	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003887	DNA-directed DNA polymerase activity	-	IEA	Function
GO:0003887	DNA-directed DNA polymerase activity	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006261	DNA-dependent DNA replication	21873635.	IBA	Process
GO:0006281	DNA repair	-	ISO	Process
GO:0006284	base-excision repair	-	IEA	Process
GO:0006284	base-excision repair	-	ISO	Process
GO:0006302	double-strand break repair	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0016446	somatic hypermutation of immunoglobulin genes	-	IEA	Process
GO:0016446	somatic hypermutation of immunoglobulin genes	-	ISO	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0043142	single-stranded DNA-dependent ATPase activity	-	IEA	Function
GO:0043142	single-stranded DNA-dependent ATPase activity	-	ISO	Function
GO:0051260	protein homooligomerization	-	IEA	Process
GO:0051260	protein homooligomerization	-	ISO	Process
GO:0051575	5'-deoxyribose-5-phosphate lyase activity	-	IEA	Function
GO:0051575	5'-deoxyribose-5-phosphate lyase activity	-	ISO	Function
GO:0071897	DNA biosynthetic process	-	IEA	Process
GO:0097681	double-strand break repair via alternative nonhomologous end joining	-	IEA	Process
GO:0097681	double-strand break repair via alternative nonhomologous end joining	-	ISO	Process
GO:2000042	negative regulation of double-strand break repair via homologous recombination	-	IEA	Process
GO:2000042	negative regulation of double-strand break repair via homologous recombination	-	ISO	Process