EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000002556 (Gene tree)
Gene ID: 108348124
Gene Symbol: NEWGENE_1562416
Alias: Tsr2
Full Name: TSR2%2C ribosome maturation factor
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 88208 bases
Position: chrX:20144432-20232639
Accession: 11417743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003540	WGG	PF10273.9	9.3e-26	1	1
ENSRNOP00000065693	WGG	PF10273.9	9.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003540	-	1397	-	ENSRNOP00000003540	192 (aa)	XP_017457767	G3V6B8
ENSRNOT00000072753	-	798	-	ENSRNOP00000065693	192 (aa)	XP_017457767	G3V6B8

Gene Model

Click here to download ENSRNOG00000002556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSG00000158526	TSR2	100	86.911	Homo_sapiens
ENSRNOG00000002556	NEWGENE_1562416	100	44.444	ENSAPOG00000004150	-	100	44.444	Acanthochromis_polyacanthus
ENSRNOG00000002556	NEWGENE_1562416	99	83.246	ENSAMEG00000002469	TSR2	100	83.246	Ailuropoda_melanoleuca
ENSRNOG00000002556	NEWGENE_1562416	70	50.714	ENSACIG00000004880	tsr2	94	50.714	Amphilophus_citrinellus
ENSRNOG00000002556	NEWGENE_1562416	100	45.128	ENSAOCG00000015893	tsr2	97	45.128	Amphiprion_ocellaris
ENSRNOG00000002556	NEWGENE_1562416	100	44.615	ENSAPEG00000023549	tsr2	97	44.615	Amphiprion_percula
ENSRNOG00000002556	NEWGENE_1562416	100	44.103	ENSATEG00000019009	-	100	45.312	Anabas_testudineus
ENSRNOG00000002556	NEWGENE_1562416	99	51.813	ENSACAG00000012270	TSR2	100	53.093	Anolis_carolinensis
ENSRNOG00000002556	NEWGENE_1562416	99	86.387	ENSANAG00000000062	TSR2	100	86.387	Aotus_nancymaae
ENSRNOG00000002556	NEWGENE_1562416	100	43.434	ENSACLG00000014269	tsr2	100	43.434	Astatotilapia_calliptera
ENSRNOG00000002556	NEWGENE_1562416	99	46.632	ENSAMXG00000016817	tsr2	89	50.256	Astyanax_mexicanus
ENSRNOG00000002556	NEWGENE_1562416	100	83.333	ENSBTAG00000015858	TSR2	100	83.333	Bos_taurus
ENSRNOG00000002556	NEWGENE_1562416	93	64.835	ENSBTAG00000018311	-	99	64.835	Bos_taurus
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSCJAG00000000251	TSR2	100	86.911	Callithrix_jacchus
ENSRNOG00000002556	NEWGENE_1562416	99	84.293	ENSCAFG00000016440	TSR2	100	84.293	Canis_familiaris
ENSRNOG00000002556	NEWGENE_1562416	99	84.293	ENSCAFG00020014044	TSR2	100	84.293	Canis_lupus_dingo
ENSRNOG00000002556	NEWGENE_1562416	94	64.835	ENSCHIG00000009963	-	94	64.835	Capra_hircus
ENSRNOG00000002556	NEWGENE_1562416	99	80.628	ENSTSYG00000005670	-	100	80.628	Carlito_syrichta
ENSRNOG00000002556	NEWGENE_1562416	99	72.251	ENSTSYG00000031321	-	100	72.251	Carlito_syrichta
ENSRNOG00000002556	NEWGENE_1562416	94	72.376	ENSTSYG00000031644	-	99	72.376	Carlito_syrichta
ENSRNOG00000002556	NEWGENE_1562416	100	80.729	ENSCPOG00000033139	TSR2	100	80.729	Cavia_porcellus
ENSRNOG00000002556	NEWGENE_1562416	99	85.340	ENSCCAG00000025421	TSR2	100	85.340	Cebus_capucinus
ENSRNOG00000002556	NEWGENE_1562416	100	82.292	ENSCATG00000045152	-	100	82.292	Cercocebus_atys
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSCATG00000036868	-	100	86.911	Cercocebus_atys
ENSRNOG00000002556	NEWGENE_1562416	100	81.771	ENSCLAG00000007235	TSR2	100	81.771	Chinchilla_lanigera
ENSRNOG00000002556	NEWGENE_1562416	99	82.199	ENSCSAG00000000402	-	100	82.199	Chlorocebus_sabaeus
ENSRNOG00000002556	NEWGENE_1562416	96	83.243	ENSCSAG00000012366	-	97	83.243	Chlorocebus_sabaeus
ENSRNOG00000002556	NEWGENE_1562416	99	84.817	ENSCHOG00000001068	TSR2	100	84.817	Choloepus_hoffmanni
ENSRNOG00000002556	NEWGENE_1562416	99	31.313	ENSCING00000002386	-	99	31.313	Ciona_intestinalis
ENSRNOG00000002556	NEWGENE_1562416	94	31.915	ENSCSAVG00000009298	-	94	31.915	Ciona_savignyi
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSCANG00000043156	-	100	86.911	Colobus_angolensis_palliatus
ENSRNOG00000002556	NEWGENE_1562416	99	74.346	ENSCANG00000036773	-	97	74.346	Colobus_angolensis_palliatus
ENSRNOG00000002556	NEWGENE_1562416	100	91.667	ENSCGRG00001023321	Tsr2	100	91.667	Cricetulus_griseus_chok1gshd
ENSRNOG00000002556	NEWGENE_1562416	100	90.256	ENSCGRG00000010855	Tsr2	100	90.256	Cricetulus_griseus_crigri
ENSRNOG00000002556	NEWGENE_1562416	98	40.000	ENSCSEG00000017003	tsr2	99	42.632	Cynoglossus_semilaevis
ENSRNOG00000002556	NEWGENE_1562416	98	43.750	ENSCVAG00000001845	tsr2	99	45.312	Cyprinodon_variegatus
ENSRNOG00000002556	NEWGENE_1562416	99	43.299	ENSDARG00000005772	tsr2	98	52.101	Danio_rerio
ENSRNOG00000002556	NEWGENE_1562416	100	81.250	ENSDORG00000025574	Tsr2	100	81.250	Dipodomys_ordii
ENSRNOG00000002556	NEWGENE_1562416	99	80.729	ENSETEG00000018510	TSR2	100	80.729	Echinops_telfairi
ENSRNOG00000002556	NEWGENE_1562416	95	38.860	ENSEBUG00000012895	tsr2	88	47.059	Eptatretus_burgeri
ENSRNOG00000002556	NEWGENE_1562416	100	82.292	ENSEASG00005013005	TSR2	100	82.292	Equus_asinus_asinus
ENSRNOG00000002556	NEWGENE_1562416	100	81.771	ENSECAG00000029844	TSR2	86	81.771	Equus_caballus
ENSRNOG00000002556	NEWGENE_1562416	98	41.579	ENSELUG00000007768	tsr2	97	41.579	Esox_lucius
ENSRNOG00000002556	NEWGENE_1562416	99	84.293	ENSFCAG00000002226	TSR2	100	84.293	Felis_catus
ENSRNOG00000002556	NEWGENE_1562416	100	79.688	ENSFDAG00000011554	TSR2	100	79.688	Fukomys_damarensis
ENSRNOG00000002556	NEWGENE_1562416	94	40.642	ENSGACG00000000595	tsr2	95	41.711	Gasterosteus_aculeatus
ENSRNOG00000002556	NEWGENE_1562416	64	57.377	ENSGAGG00000007629	TSR2	84	50.000	Gopherus_agassizii
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSGGOG00000041368	TSR2	100	86.911	Gorilla_gorilla
ENSRNOG00000002556	NEWGENE_1562416	100	42.929	ENSHBUG00000020989	tsr2	80	43.939	Haplochromis_burtoni
ENSRNOG00000002556	NEWGENE_1562416	100	78.125	ENSHGLG00000002188	TSR2	100	78.125	Heterocephalus_glaber_female
ENSRNOG00000002556	NEWGENE_1562416	100	78.125	ENSHGLG00100001234	TSR2	100	78.125	Heterocephalus_glaber_male
ENSRNOG00000002556	NEWGENE_1562416	69	50.000	ENSHCOG00000017585	-	64	50.000	Hippocampus_comes
ENSRNOG00000002556	NEWGENE_1562416	99	45.078	ENSIPUG00000012170	tsr2	100	45.078	Ictalurus_punctatus
ENSRNOG00000002556	NEWGENE_1562416	100	88.021	ENSSTOG00000033612	TSR2	100	88.021	Ictidomys_tridecemlineatus
ENSRNOG00000002556	NEWGENE_1562416	99	83.505	ENSJJAG00000004561	Tsr2	99	83.505	Jaculus_jaculus
ENSRNOG00000002556	NEWGENE_1562416	95	46.524	ENSKMAG00000012611	-	96	47.312	Kryptolebias_marmoratus
ENSRNOG00000002556	NEWGENE_1562416	65	52.756	ENSLBEG00000017316	tsr2	54	52.239	Labrus_bergylta
ENSRNOG00000002556	NEWGENE_1562416	100	83.333	ENSLAFG00000018093	TSR2	100	83.333	Loxodonta_africana
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSMFAG00000001364	TSR2	100	86.911	Macaca_fascicularis
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSMMUG00000012612	TSR2	100	86.911	Macaca_mulatta
ENSRNOG00000002556	NEWGENE_1562416	99	82.199	ENSMMUG00000010044	-	100	82.199	Macaca_mulatta
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSMNEG00000041996	TSR2	100	86.911	Macaca_nemestrina
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSMLEG00000032632	TSR2	100	86.911	Mandrillus_leucophaeus
ENSRNOG00000002556	NEWGENE_1562416	100	45.128	ENSMAMG00000011540	tsr2	100	44.615	Mastacembelus_armatus
ENSRNOG00000002556	NEWGENE_1562416	100	43.434	ENSMZEG00005026752	tsr2	100	43.434	Maylandia_zebra
ENSRNOG00000002556	NEWGENE_1562416	100	92.308	ENSMAUG00000012389	Tsr2	100	92.308	Mesocricetus_auratus
ENSRNOG00000002556	NEWGENE_1562416	100	82.812	ENSMICG00000010116	TSR2	100	82.812	Microcebus_murinus
ENSRNOG00000002556	NEWGENE_1562416	100	85.417	ENSMOCG00000006662	Tsr2	100	85.417	Microtus_ochrogaster
ENSRNOG00000002556	NEWGENE_1562416	94	39.037	ENSMMOG00000009751	-	94	39.037	Mola_mola
ENSRNOG00000002556	NEWGENE_1562416	99	48.205	ENSMODG00000020894	-	100	48.205	Monodelphis_domestica
ENSRNOG00000002556	NEWGENE_1562416	95	43.716	ENSMALG00000014552	tsr2	96	43.716	Monopterus_albus
ENSRNOG00000002556	NEWGENE_1562416	100	95.833	MGP_CAROLIEiJ_G0033491	Tsr2	100	95.833	Mus_caroli
ENSRNOG00000002556	NEWGENE_1562416	100	96.354	ENSMUSG00000025264	Tsr2	100	96.354	Mus_musculus
ENSRNOG00000002556	NEWGENE_1562416	100	94.271	MGP_PahariEiJ_G0032030	Tsr2	100	94.271	Mus_pahari
ENSRNOG00000002556	NEWGENE_1562416	100	96.354	MGP_SPRETEiJ_G0034661	Tsr2	100	96.354	Mus_spretus
ENSRNOG00000002556	NEWGENE_1562416	99	83.246	ENSMPUG00000011436	TSR2	100	83.246	Mustela_putorius_furo
ENSRNOG00000002556	NEWGENE_1562416	94	79.006	ENSMLUG00000010613	TSR2	95	79.006	Myotis_lucifugus
ENSRNOG00000002556	NEWGENE_1562416	100	86.458	ENSNGAG00000021351	Tsr2	100	86.458	Nannospalax_galili
ENSRNOG00000002556	NEWGENE_1562416	100	44.444	ENSNBRG00000007965	tsr2	100	44.444	Neolamprologus_brichardi
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSNLEG00000030041	TSR2	100	86.911	Nomascus_leucogenys
ENSRNOG00000002556	NEWGENE_1562416	53	59.804	ENSMEUG00000000188	-	100	46.341	Notamacropus_eugenii
ENSRNOG00000002556	NEWGENE_1562416	59	54.386	ENSMEUG00000006729	-	94	53.333	Notamacropus_eugenii
ENSRNOG00000002556	NEWGENE_1562416	66	79.528	ENSOPRG00000016595	TSR2	100	79.528	Ochotona_princeps
ENSRNOG00000002556	NEWGENE_1562416	92	73.446	ENSODEG00000019951	-	100	73.446	Octodon_degus
ENSRNOG00000002556	NEWGENE_1562416	94	78.453	ENSODEG00000014931	-	98	78.453	Octodon_degus
ENSRNOG00000002556	NEWGENE_1562416	100	77.604	ENSODEG00000000542	-	100	77.604	Octodon_degus
ENSRNOG00000002556	NEWGENE_1562416	100	43.434	ENSONIG00000000763	tsr2	100	43.434	Oreochromis_niloticus
ENSRNOG00000002556	NEWGENE_1562416	69	71.212	ENSOANG00000000707	TSR2	93	71.212	Ornithorhynchus_anatinus
ENSRNOG00000002556	NEWGENE_1562416	99	85.864	ENSOCUG00000027678	-	100	85.864	Oryctolagus_cuniculus
ENSRNOG00000002556	NEWGENE_1562416	86	83.735	ENSOCUG00000014714	-	100	83.735	Oryctolagus_cuniculus
ENSRNOG00000002556	NEWGENE_1562416	95	44.262	ENSORLG00000022662	tsr2	96	43.716	Oryzias_latipes
ENSRNOG00000002556	NEWGENE_1562416	95	43.716	ENSORLG00020003033	tsr2	96	43.169	Oryzias_latipes_hni
ENSRNOG00000002556	NEWGENE_1562416	95	43.169	ENSORLG00015017253	tsr2	96	43.169	Oryzias_latipes_hsok
ENSRNOG00000002556	NEWGENE_1562416	100	42.564	ENSOMEG00000011483	tsr2	100	42.564	Oryzias_melastigma
ENSRNOG00000002556	NEWGENE_1562416	100	43.077	ENSOMEG00000013975	-	100	43.077	Oryzias_melastigma
ENSRNOG00000002556	NEWGENE_1562416	99	79.581	ENSOGAG00000003468	TSR2	100	79.581	Otolemur_garnettii
ENSRNOG00000002556	NEWGENE_1562416	100	83.854	ENSOARG00000006467	-	100	83.854	Ovis_aries
ENSRNOG00000002556	NEWGENE_1562416	93	61.798	ENSOARG00000009487	-	98	61.798	Ovis_aries
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSPPAG00000021242	TSR2	100	86.911	Pan_paniscus
ENSRNOG00000002556	NEWGENE_1562416	99	84.293	ENSPPRG00000001337	TSR2	100	84.293	Panthera_pardus
ENSRNOG00000002556	NEWGENE_1562416	100	83.854	ENSPTIG00000007138	TSR2	100	83.854	Panthera_tigris_altaica
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSPTRG00000045904	TSR2	100	86.911	Pan_troglodytes
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSPANG00000008042	-	100	86.911	Papio_anubis
ENSRNOG00000002556	NEWGENE_1562416	94	81.768	ENSPANG00000002291	-	98	81.768	Papio_anubis
ENSRNOG00000002556	NEWGENE_1562416	99	41.026	ENSPKIG00000023676	tsr2	100	41.026	Paramormyrops_kingsleyae
ENSRNOG00000002556	NEWGENE_1562416	100	91.146	ENSPEMG00000015713	Tsr2	100	91.146	Peromyscus_maniculatus_bairdii
ENSRNOG00000002556	NEWGENE_1562416	94	40.323	ENSPMAG00000001705	tsr2	92	41.081	Petromyzon_marinus
ENSRNOG00000002556	NEWGENE_1562416	99	52.284	ENSPCIG00000024314	-	95	52.284	Phascolarctos_cinereus
ENSRNOG00000002556	NEWGENE_1562416	95	45.263	ENSPFOG00000011824	tsr2	96	45.263	Poecilia_formosa
ENSRNOG00000002556	NEWGENE_1562416	95	46.237	ENSPLAG00000023520	tsr2	96	46.237	Poecilia_latipinna
ENSRNOG00000002556	NEWGENE_1562416	95	46.237	ENSPMEG00000000360	tsr2	96	46.237	Poecilia_mexicana
ENSRNOG00000002556	NEWGENE_1562416	98	45.128	ENSPREG00000013009	tsr2	99	45.128	Poecilia_reticulata
ENSRNOG00000002556	NEWGENE_1562416	100	86.458	ENSPPYG00000020381	-	72	86.458	Pongo_abelii
ENSRNOG00000002556	NEWGENE_1562416	99	81.152	ENSPCOG00000002354	TSR2	100	81.152	Propithecus_coquereli
ENSRNOG00000002556	NEWGENE_1562416	64	82.114	ENSPVAG00000000034	TSR2	100	82.114	Pteropus_vampyrus
ENSRNOG00000002556	NEWGENE_1562416	100	42.929	ENSPNYG00000019995	tsr2	80	43.939	Pundamilia_nyererei
ENSRNOG00000002556	NEWGENE_1562416	99	45.596	ENSPNAG00000024167	tsr2	100	45.596	Pygocentrus_nattereri
ENSRNOG00000002556	NEWGENE_1562416	100	78.125	ENSRBIG00000003999	-	90	78.125	Rhinopithecus_bieti
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSRBIG00000024521	-	100	86.911	Rhinopithecus_bieti
ENSRNOG00000002556	NEWGENE_1562416	99	86.911	ENSRROG00000029439	-	100	86.911	Rhinopithecus_roxellana
ENSRNOG00000002556	NEWGENE_1562416	100	78.646	ENSRROG00000033469	-	93	78.646	Rhinopithecus_roxellana
ENSRNOG00000002556	NEWGENE_1562416	99	86.387	ENSSBOG00000019737	TSR2	100	86.387	Saimiri_boliviensis_boliviensis
ENSRNOG00000002556	NEWGENE_1562416	86	51.515	ENSSHAG00000004824	-	99	51.515	Sarcophilus_harrisii
ENSRNOG00000002556	NEWGENE_1562416	99	42.786	ENSSFOG00015002207	tsr2	100	45.545	Scleropages_formosus
ENSRNOG00000002556	NEWGENE_1562416	100	45.128	ENSSMAG00000012882	tsr2	100	45.641	Scophthalmus_maximus
ENSRNOG00000002556	NEWGENE_1562416	100	45.918	ENSSDUG00000019445	tsr2	100	46.154	Seriola_dumerili
ENSRNOG00000002556	NEWGENE_1562416	100	45.641	ENSSLDG00000005598	tsr2	100	46.154	Seriola_lalandi_dorsalis
ENSRNOG00000002556	NEWGENE_1562416	99	47.423	ENSSPUG00000019286	TSR2	99	48.691	Sphenodon_punctatus
ENSRNOG00000002556	NEWGENE_1562416	99	81.152	ENSSSCG00000012334	TSR2	100	81.152	Sus_scrofa
ENSRNOG00000002556	NEWGENE_1562416	94	41.848	ENSTRUG00000008947	tsr2	95	41.848	Takifugu_rubripes
ENSRNOG00000002556	NEWGENE_1562416	90	40.113	ENSTNIG00000002173	-	99	39.429	Tetraodon_nigroviridis
ENSRNOG00000002556	NEWGENE_1562416	68	83.206	ENSTBEG00000016242	TSR2	100	82.993	Tupaia_belangeri
ENSRNOG00000002556	NEWGENE_1562416	99	67.539	ENSTTRG00000003274	TSR2	100	67.539	Tursiops_truncatus
ENSRNOG00000002556	NEWGENE_1562416	99	81.443	ENSUAMG00000009605	TSR2	100	81.443	Ursus_americanus
ENSRNOG00000002556	NEWGENE_1562416	99	81.443	ENSUMAG00000019189	TSR2	100	81.443	Ursus_maritimus
ENSRNOG00000002556	NEWGENE_1562416	94	74.444	ENSVPAG00000007532	TSR2	100	74.444	Vicugna_pacos
ENSRNOG00000002556	NEWGENE_1562416	99	80.928	ENSVVUG00000002247	TSR2	99	80.928	Vulpes_vulpes
ENSRNOG00000002556	NEWGENE_1562416	99	43.367	ENSXETG00000033574	TSR2	99	44.503	Xenopus_tropicalis
ENSRNOG00000002556	NEWGENE_1562416	98	45.641	ENSXMAG00000024827	tsr2	90	45.641	Xiphophorus_maculatus