EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002580 (Gene tree)
Gene ID: 304851
Gene Symbol: Trmt1l
Alias: LOC304851|MGC124643|RGD1307890|Trm1l
Full Name: tRNA methyltransferase 1-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 33164 bases
Position: chr13:68785827-68818990
Accession: 1307890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003517	TRM	PF02005.16	1.3e-65	1	2
ENSRNOP00000003517	TRM	PF02005.16	1.3e-65	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003517	-	2758	XM_006249992	ENSRNOP00000003517	723 (aa)	XP_006250054	Q496Z9

Gene Model

Click here to download ENSRNOG00000002580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002580's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002580	Trmt1l	100	86.903	ENSG00000121486	TRMT1L	99	95.714	Homo_sapiens
ENSRNOG00000002580	Trmt1l	88	59.317	ENSAPOG00000011807	trmt1l	99	56.556	Acanthochromis_polyacanthus
ENSRNOG00000002580	Trmt1l	100	85.578	ENSAMEG00000013538	TRMT1L	100	86.395	Ailuropoda_melanoleuca
ENSRNOG00000002580	Trmt1l	68	60.966	ENSACIG00000012049	trmt1l	96	60.966	Amphilophus_citrinellus
ENSRNOG00000002580	Trmt1l	87	60.410	ENSAOCG00000018112	trmt1l	99	60.410	Amphiprion_ocellaris
ENSRNOG00000002580	Trmt1l	88	59.259	ENSAPEG00000021433	trmt1l	99	59.409	Amphiprion_percula
ENSRNOG00000002580	Trmt1l	88	61.111	ENSATEG00000004573	trmt1l	98	63.576	Anabas_testudineus
ENSRNOG00000002580	Trmt1l	90	71.151	ENSAPLG00000008394	TRMT1L	99	67.832	Anas_platyrhynchos
ENSRNOG00000002580	Trmt1l	87	71.949	ENSACAG00000002342	TRMT1L	87	71.949	Anolis_carolinensis
ENSRNOG00000002580	Trmt1l	100	86.767	ENSANAG00000038162	TRMT1L	100	86.767	Aotus_nancymaae
ENSRNOG00000002580	Trmt1l	88	60.031	ENSACLG00000021625	trmt1l	93	60.031	Astatotilapia_calliptera
ENSRNOG00000002580	Trmt1l	88	61.883	ENSAMXG00000009602	trmt1l	91	61.883	Astyanax_mexicanus
ENSRNOG00000002580	Trmt1l	100	84.844	ENSBTAG00000011285	TRMT1L	100	84.844	Bos_taurus
ENSRNOG00000002580	Trmt1l	100	84.857	ENSCJAG00000005456	TRMT1L	100	85.130	Callithrix_jacchus
ENSRNOG00000002580	Trmt1l	99	86.512	ENSCAFG00000013518	TRMT1L	98	86.649	Canis_familiaris
ENSRNOG00000002580	Trmt1l	100	86.531	ENSCAFG00020015640	TRMT1L	100	86.667	Canis_lupus_dingo
ENSRNOG00000002580	Trmt1l	100	85.521	ENSCHIG00000016522	TRMT1L	100	85.521	Capra_hircus
ENSRNOG00000002580	Trmt1l	100	85.226	ENSTSYG00000010465	TRMT1L	100	85.226	Carlito_syrichta
ENSRNOG00000002580	Trmt1l	72	86.594	ENSCAPG00000012562	TRMT1L	88	86.957	Cavia_aperea
ENSRNOG00000002580	Trmt1l	100	84.499	ENSCPOG00000001567	TRMT1L	100	85.185	Cavia_porcellus
ENSRNOG00000002580	Trmt1l	100	87.176	ENSCCAG00000018699	TRMT1L	100	87.176	Cebus_capucinus
ENSRNOG00000002580	Trmt1l	97	87.447	ENSCATG00000043114	TRMT1L	100	86.803	Cercocebus_atys
ENSRNOG00000002580	Trmt1l	98	68.732	ENSCLAG00000010853	-	98	69.475	Chinchilla_lanigera
ENSRNOG00000002580	Trmt1l	100	86.420	ENSCLAG00000010801	-	100	87.243	Chinchilla_lanigera
ENSRNOG00000002580	Trmt1l	97	87.447	ENSCSAG00000012880	TRMT1L	100	86.803	Chlorocebus_sabaeus
ENSRNOG00000002580	Trmt1l	60	91.770	ENSCHOG00000011164	TRMT1L	89	74.062	Choloepus_hoffmanni
ENSRNOG00000002580	Trmt1l	89	75.270	ENSCPBG00000015694	TRMT1L	92	75.000	Chrysemys_picta_bellii
ENSRNOG00000002580	Trmt1l	97	87.024	ENSCANG00000031107	TRMT1L	100	86.395	Colobus_angolensis_palliatus
ENSRNOG00000002580	Trmt1l	100	92.466	ENSCGRG00001019297	Trmt1l	100	92.466	Cricetulus_griseus_chok1gshd
ENSRNOG00000002580	Trmt1l	100	92.466	ENSCGRG00000005036	Trmt1l	100	92.466	Cricetulus_griseus_crigri
ENSRNOG00000002580	Trmt1l	89	59.816	ENSCSEG00000001248	trmt1l	94	60.697	Cynoglossus_semilaevis
ENSRNOG00000002580	Trmt1l	89	58.788	ENSCVAG00000012274	trmt1l	96	58.589	Cyprinodon_variegatus
ENSRNOG00000002580	Trmt1l	85	60.669	ENSDARG00000042057	trmt1l	91	62.692	Danio_rerio
ENSRNOG00000002580	Trmt1l	100	85.150	ENSDNOG00000005239	TRMT1L	100	85.150	Dasypus_novemcinctus
ENSRNOG00000002580	Trmt1l	98	78.622	ENSDORG00000003298	Trmt1l	100	78.622	Dipodomys_ordii
ENSRNOG00000002580	Trmt1l	81	75.561	ENSETEG00000015895	TRMT1L	91	75.561	Echinops_telfairi
ENSRNOG00000002580	Trmt1l	86	49.120	ENSEBUG00000010301	trmt1l	95	49.120	Eptatretus_burgeri
ENSRNOG00000002580	Trmt1l	100	80.863	ENSEASG00005005551	TRMT1L	100	81.536	Equus_asinus_asinus
ENSRNOG00000002580	Trmt1l	99	84.595	ENSECAG00000020999	TRMT1L	95	85.270	Equus_caballus
ENSRNOG00000002580	Trmt1l	99	70.937	ENSEEUG00000014110	TRMT1L	100	71.488	Erinaceus_europaeus
ENSRNOG00000002580	Trmt1l	87	61.574	ENSELUG00000020587	trmt1l	90	62.053	Esox_lucius
ENSRNOG00000002580	Trmt1l	100	86.183	ENSFCAG00000011285	TRMT1L	100	86.594	Felis_catus
ENSRNOG00000002580	Trmt1l	90	70.122	ENSFALG00000003177	TRMT1L	100	70.122	Ficedula_albicollis
ENSRNOG00000002580	Trmt1l	100	85.616	ENSFDAG00000008822	TRMT1L	100	85.342	Fukomys_damarensis
ENSRNOG00000002580	Trmt1l	72	62.430	ENSFHEG00000014328	trmt1l	99	62.430	Fundulus_heteroclitus
ENSRNOG00000002580	Trmt1l	87	59.781	ENSGMOG00000009535	trmt1l	99	60.190	Gadus_morhua
ENSRNOG00000002580	Trmt1l	90	70.348	ENSGALG00000033077	TRMT1L	85	71.385	Gallus_gallus
ENSRNOG00000002580	Trmt1l	89	59.455	ENSGAFG00000012445	trmt1l	91	60.000	Gambusia_affinis
ENSRNOG00000002580	Trmt1l	85	60.572	ENSGACG00000005050	trmt1l	97	61.722	Gasterosteus_aculeatus
ENSRNOG00000002580	Trmt1l	89	75.349	ENSGAGG00000007441	TRMT1L	84	75.349	Gopherus_agassizii
ENSRNOG00000002580	Trmt1l	100	86.767	ENSGGOG00000011778	TRMT1L	100	86.767	Gorilla_gorilla
ENSRNOG00000002580	Trmt1l	88	59.784	ENSHBUG00000000622	trmt1l	97	61.745	Haplochromis_burtoni
ENSRNOG00000002580	Trmt1l	100	72.678	ENSHGLG00000012595	-	99	72.616	Heterocephalus_glaber_female
ENSRNOG00000002580	Trmt1l	100	81.981	ENSHGLG00000003135	-	100	81.981	Heterocephalus_glaber_female
ENSRNOG00000002580	Trmt1l	100	72.678	ENSHGLG00100004569	-	99	72.616	Heterocephalus_glaber_male
ENSRNOG00000002580	Trmt1l	100	86.145	ENSHGLG00100019412	-	100	86.145	Heterocephalus_glaber_male
ENSRNOG00000002580	Trmt1l	86	61.120	ENSIPUG00000008873	trmt1l	97	60.480	Ictalurus_punctatus
ENSRNOG00000002580	Trmt1l	100	86.951	ENSSTOG00000010332	TRMT1L	100	86.951	Ictidomys_tridecemlineatus
ENSRNOG00000002580	Trmt1l	100	82.030	ENSJJAG00000010929	Trmt1l	100	81.619	Jaculus_jaculus
ENSRNOG00000002580	Trmt1l	85	60.743	ENSKMAG00000010310	trmt1l	90	60.806	Kryptolebias_marmoratus
ENSRNOG00000002580	Trmt1l	84	57.878	ENSLBEG00000007982	-	92	59.625	Labrus_bergylta
ENSRNOG00000002580	Trmt1l	90	58.771	ENSLBEG00000003487	trmt1l	90	60.443	Labrus_bergylta
ENSRNOG00000002580	Trmt1l	89	65.899	ENSLACG00000008447	TRMT1L	95	66.049	Latimeria_chalumnae
ENSRNOG00000002580	Trmt1l	86	63.937	ENSLOCG00000001781	trmt1l	89	63.937	Lepisosteus_oculatus
ENSRNOG00000002580	Trmt1l	100	85.871	ENSLAFG00000004339	TRMT1L	100	86.183	Loxodonta_africana
ENSRNOG00000002580	Trmt1l	97	87.306	ENSMFAG00000037592	TRMT1L	100	86.667	Macaca_fascicularis
ENSRNOG00000002580	Trmt1l	97	87.165	ENSMMUG00000013879	TRMT1L	100	86.531	Macaca_mulatta
ENSRNOG00000002580	Trmt1l	97	87.447	ENSMNEG00000041637	TRMT1L	100	86.803	Macaca_nemestrina
ENSRNOG00000002580	Trmt1l	97	87.306	ENSMLEG00000004840	TRMT1L	100	86.667	Mandrillus_leucophaeus
ENSRNOG00000002580	Trmt1l	84	62.480	ENSMAMG00000015305	trmt1l	98	62.480	Mastacembelus_armatus
ENSRNOG00000002580	Trmt1l	88	59.877	ENSMZEG00005017822	trmt1l	93	59.877	Maylandia_zebra
ENSRNOG00000002580	Trmt1l	89	70.750	ENSMGAG00000000930	TRMT1L	99	70.750	Meleagris_gallopavo
ENSRNOG00000002580	Trmt1l	100	88.115	ENSMAUG00000019870	Trmt1l	100	88.115	Mesocricetus_auratus
ENSRNOG00000002580	Trmt1l	100	87.330	ENSMICG00000009494	TRMT1L	100	87.330	Microcebus_murinus
ENSRNOG00000002580	Trmt1l	100	91.484	ENSMOCG00000016453	Trmt1l	100	91.484	Microtus_ochrogaster
ENSRNOG00000002580	Trmt1l	85	59.807	ENSMMOG00000016961	trmt1l	97	59.325	Mola_mola
ENSRNOG00000002580	Trmt1l	88	78.106	ENSMODG00000007454	TRMT1L	74	78.106	Monodelphis_domestica
ENSRNOG00000002580	Trmt1l	89	59.098	ENSMALG00000019306	trmt1l	91	60.815	Monopterus_albus
ENSRNOG00000002580	Trmt1l	100	95.317	MGP_CAROLIEiJ_G0014693	Trmt1l	100	95.317	Mus_caroli
ENSRNOG00000002580	Trmt1l	100	96.016	ENSMUSG00000053286	Trmt1l	100	96.016	Mus_musculus
ENSRNOG00000002580	Trmt1l	100	94.658	MGP_PahariEiJ_G0027929	Trmt1l	100	94.658	Mus_pahari
ENSRNOG00000002580	Trmt1l	86	96.393	MGP_SPRETEiJ_G0015500	Trmt1l	100	96.393	Mus_spretus
ENSRNOG00000002580	Trmt1l	100	82.561	ENSMPUG00000011859	TRMT1L	100	83.651	Mustela_putorius_furo
ENSRNOG00000002580	Trmt1l	91	87.727	ENSMLUG00000001136	TRMT1L	100	85.302	Myotis_lucifugus
ENSRNOG00000002580	Trmt1l	100	87.106	ENSNGAG00000011685	Trmt1l	100	87.517	Nannospalax_galili
ENSRNOG00000002580	Trmt1l	62	66.026	ENSNBRG00000004053	trmt1l	94	65.132	Neolamprologus_brichardi
ENSRNOG00000002580	Trmt1l	100	87.312	ENSNLEG00000018030	TRMT1L	100	87.312	Nomascus_leucogenys
ENSRNOG00000002580	Trmt1l	81	67.391	ENSMEUG00000011344	TRMT1L	83	67.436	Notamacropus_eugenii
ENSRNOG00000002580	Trmt1l	90	73.354	ENSOPRG00000000680	TRMT1L	99	73.354	Ochotona_princeps
ENSRNOG00000002580	Trmt1l	100	81.619	ENSODEG00000000826	TRMT1L	100	80.438	Octodon_degus
ENSRNOG00000002580	Trmt1l	88	59.784	ENSONIG00000007823	trmt1l	100	61.404	Oreochromis_niloticus
ENSRNOG00000002580	Trmt1l	89	73.953	ENSOANG00000001010	TRMT1L	99	73.953	Ornithorhynchus_anatinus
ENSRNOG00000002580	Trmt1l	90	85.015	ENSOCUG00000004896	TRMT1L	92	85.168	Oryctolagus_cuniculus
ENSRNOG00000002580	Trmt1l	84	61.874	ENSORLG00000029610	trmt1l	95	63.652	Oryzias_latipes
ENSRNOG00000002580	Trmt1l	84	61.874	ENSORLG00020002203	trmt1l	90	61.760	Oryzias_latipes_hni
ENSRNOG00000002580	Trmt1l	84	61.874	ENSORLG00015021512	trmt1l	90	61.760	Oryzias_latipes_hsok
ENSRNOG00000002580	Trmt1l	80	59.168	ENSOMEG00000016275	trmt1l	87	58.790	Oryzias_melastigma
ENSRNOG00000002580	Trmt1l	89	75.387	ENSOGAG00000016186	TRMT1L	99	75.387	Otolemur_garnettii
ENSRNOG00000002580	Trmt1l	100	85.366	ENSOARG00000003786	TRMT1L	100	85.366	Ovis_aries
ENSRNOG00000002580	Trmt1l	100	87.040	ENSPPAG00000029141	TRMT1L	100	87.040	Pan_paniscus
ENSRNOG00000002580	Trmt1l	100	86.047	ENSPPRG00000023981	TRMT1L	100	86.457	Panthera_pardus
ENSRNOG00000002580	Trmt1l	100	86.183	ENSPTIG00000021754	TRMT1L	100	86.594	Panthera_tigris_altaica
ENSRNOG00000002580	Trmt1l	100	87.040	ENSPTRG00000001776	TRMT1L	100	87.040	Pan_troglodytes
ENSRNOG00000002580	Trmt1l	97	85.091	ENSPANG00000020890	TRMT1L	100	84.532	Papio_anubis
ENSRNOG00000002580	Trmt1l	88	60.983	ENSPKIG00000005941	trmt1l	91	60.983	Paramormyrops_kingsleyae
ENSRNOG00000002580	Trmt1l	87	75.475	ENSPSIG00000010011	TRMT1L	93	75.475	Pelodiscus_sinensis
ENSRNOG00000002580	Trmt1l	73	57.013	ENSPMGG00000021359	trmt1l	93	58.011	Periophthalmus_magnuspinnatus
ENSRNOG00000002580	Trmt1l	96	92.000	ENSPEMG00000000031	Trmt1l	100	91.358	Peromyscus_maniculatus_bairdii
ENSRNOG00000002580	Trmt1l	85	57.302	ENSPMAG00000005838	trmt1l	100	57.302	Petromyzon_marinus
ENSRNOG00000002580	Trmt1l	89	77.761	ENSPCIG00000002409	TRMT1L	87	77.761	Phascolarctos_cinereus
ENSRNOG00000002580	Trmt1l	90	59.309	ENSPFOG00000003872	trmt1l	99	62.205	Poecilia_formosa
ENSRNOG00000002580	Trmt1l	90	59.309	ENSPLAG00000010387	trmt1l	92	60.625	Poecilia_latipinna
ENSRNOG00000002580	Trmt1l	90	59.309	ENSPMEG00000011828	trmt1l	97	62.919	Poecilia_mexicana
ENSRNOG00000002580	Trmt1l	87	60.592	ENSPREG00000002866	trmt1l	93	59.722	Poecilia_reticulata
ENSRNOG00000002580	Trmt1l	100	86.767	ENSPPYG00000000416	TRMT1L	100	86.767	Pongo_abelii
ENSRNOG00000002580	Trmt1l	81	87.097	ENSPCAG00000008257	TRMT1L	89	84.000	Procavia_capensis
ENSRNOG00000002580	Trmt1l	86	78.218	ENSPCOG00000005682	TRMT1L	93	78.218	Propithecus_coquereli
ENSRNOG00000002580	Trmt1l	89	88.632	ENSPVAG00000005961	TRMT1L	100	76.944	Pteropus_vampyrus
ENSRNOG00000002580	Trmt1l	86	59.177	ENSPNYG00000005607	trmt1l	97	61.849	Pundamilia_nyererei
ENSRNOG00000002580	Trmt1l	87	61.682	ENSPNAG00000004389	trmt1l	90	61.682	Pygocentrus_nattereri
ENSRNOG00000002580	Trmt1l	97	87.165	ENSRBIG00000042589	TRMT1L	100	86.531	Rhinopithecus_bieti
ENSRNOG00000002580	Trmt1l	97	87.165	ENSRROG00000032183	TRMT1L	100	86.531	Rhinopithecus_roxellana
ENSRNOG00000002580	Trmt1l	100	86.767	ENSSBOG00000029282	TRMT1L	100	86.767	Saimiri_boliviensis_boliviensis
ENSRNOG00000002580	Trmt1l	90	60.383	ENSSFOG00015004878	trmt1l	91	61.905	Scleropages_formosus
ENSRNOG00000002580	Trmt1l	57	71.429	ENSSMAG00000015425	trmt1l	92	71.429	Scophthalmus_maximus
ENSRNOG00000002580	Trmt1l	86	61.867	ENSSDUG00000021807	trmt1l	96	64.286	Seriola_dumerili
ENSRNOG00000002580	Trmt1l	85	61.859	ENSSLDG00000016579	trmt1l	96	64.116	Seriola_lalandi_dorsalis
ENSRNOG00000002580	Trmt1l	66	81.797	ENSSARG00000010135	TRMT1L	87	81.797	Sorex_araneus
ENSRNOG00000002580	Trmt1l	81	77.381	ENSSPUG00000003927	TRMT1L	97	76.020	Sphenodon_punctatus
ENSRNOG00000002580	Trmt1l	88	60.248	ENSSPAG00000008597	trmt1l	92	60.248	Stegastes_partitus
ENSRNOG00000002580	Trmt1l	99	78.995	ENSSSCG00000021393	TRMT1L	100	78.995	Sus_scrofa
ENSRNOG00000002580	Trmt1l	89	69.242	ENSTGUG00000003737	TRMT1L	98	69.242	Taeniopygia_guttata
ENSRNOG00000002580	Trmt1l	75	72.917	ENSTRUG00000002396	trmt1l	95	72.917	Takifugu_rubripes
ENSRNOG00000002580	Trmt1l	58	64.000	ENSTNIG00000005534	trmt1l	99	63.765	Tetraodon_nigroviridis
ENSRNOG00000002580	Trmt1l	86	81.176	ENSTBEG00000016498	TRMT1L	86	80.693	Tupaia_belangeri
ENSRNOG00000002580	Trmt1l	100	84.469	ENSTTRG00000005892	TRMT1L	100	84.469	Tursiops_truncatus
ENSRNOG00000002580	Trmt1l	100	85.442	ENSUAMG00000020936	TRMT1L	100	86.395	Ursus_americanus
ENSRNOG00000002580	Trmt1l	99	85.286	ENSUMAG00000021919	TRMT1L	99	86.240	Ursus_maritimus
ENSRNOG00000002580	Trmt1l	90	87.003	ENSVPAG00000011854	TRMT1L	100	87.003	Vicugna_pacos
ENSRNOG00000002580	Trmt1l	100	86.395	ENSVVUG00000009166	TRMT1L	100	86.531	Vulpes_vulpes
ENSRNOG00000002580	Trmt1l	71	58.157	ENSXETG00000004539	trmt1l	95	58.532	Xenopus_tropicalis
ENSRNOG00000002580	Trmt1l	81	62.010	ENSXCOG00000007372	trmt1l	91	62.010	Xiphophorus_couchianus
ENSRNOG00000002580	Trmt1l	90	58.947	ENSXMAG00000003575	trmt1l	96	62.351	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0002940	tRNA N2-guanine methylation	21873635.	IBA	Process
GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008344	adult locomotory behavior	-	ISO	Process
GO:0030534	adult behavior	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function