EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002612 (Gene tree)
Gene ID: 85432
Gene Symbol: Ddx52
Alias: Rok1|rROK1L
Full Name: DExD-box helicase 52
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 23680 bases
Position: chr10:71253598-71277277
Accession: 621743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003600	ResIII	PF04851.15	5.8e-06	1	1
ENSRNOP00000003600	DEAD	PF00270.29	2.2e-37	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003600	-	3108	-	ENSRNOP00000003600	598 (aa)	-	Q99PT0

Gene Model

Click here to download ENSRNOG00000002612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000002612	Ddx52	68	30.733	ENSRNOG00000012771	Ddx41	66	30.733
ENSRNOG00000002612	Ddx52	69	30.969	ENSRNOG00000030680	Ddx5	67	30.969
ENSRNOG00000002612	Ddx52	68	30.861	ENSRNOG00000051170	Ddx17	63	31.529
ENSRNOG00000002612	Ddx52	62	30.846	ENSRNOG00000001043	Ddx55	63	30.846
ENSRNOG00000002612	Ddx52	59	32.958	ENSRNOG00000001815	Eif4a2	88	31.193
ENSRNOG00000002612	Ddx52	68	31.002	ENSRNOG00000025430	Ddx18	54	31.959
ENSRNOG00000002612	Ddx52	61	31.266	ENSRNOG00000004670	Ddx56	72	31.762
ENSRNOG00000002612	Ddx52	60	42.857	ENSRNOG00000006652	Ddx1	55	42.857
ENSRNOG00000002612	Ddx52	70	32.941	ENSRNOG00000042451	Ddx59	64	33.252
ENSRNOG00000002612	Ddx52	61	30.233	ENSRNOG00000037480	Ddx51	67	30.233
ENSRNOG00000002612	Ddx52	58	32.955	ENSRNOG00000007838	Ddx47	75	32.955
ENSRNOG00000002612	Ddx52	66	32.530	ENSRNOG00000002501	Ddx3y	61	32.530
ENSRNOG00000002612	Ddx52	63	31.915	ENSRNOG00000053932	Ddx6	76	31.915
ENSRNOG00000002612	Ddx52	66	34.550	ENSRNOG00000026686	Ddx4	56	35.036
ENSRNOG00000002612	Ddx52	71	30.753	ENSRNOG00000060154	Ddx23	55	30.753
ENSRNOG00000002612	Ddx52	60	32.033	ENSRNOG00000030628	Eif4a1	87	32.033
ENSRNOG00000002612	Ddx52	69	34.048	ENSRNOG00000050868	Ddx43	63	34.048
ENSRNOG00000002612	Ddx52	66	32.048	ENSRNOG00000057231	Ddx3	62	32.048
ENSRNOG00000002612	Ddx52	66	32.530	ENSRNOG00000023383	Ddx3x	61	32.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002612	Ddx52	100	87.833	ENSG00000278053	DDX52	99	90.351	Homo_sapiens
ENSRNOG00000002612	Ddx52	99	61.364	ENSAPOG00000008759	ddx52	87	61.364	Acanthochromis_polyacanthus
ENSRNOG00000002612	Ddx52	100	87.667	ENSAMEG00000013159	DDX52	100	87.333	Ailuropoda_melanoleuca
ENSRNOG00000002612	Ddx52	92	64.107	ENSACIG00000002843	ddx52	99	65.171	Amphilophus_citrinellus
ENSRNOG00000002612	Ddx52	99	61.066	ENSAOCG00000007983	ddx52	90	60.582	Amphiprion_ocellaris
ENSRNOG00000002612	Ddx52	99	61.066	ENSAOCG00000000356	-	88	60.582	Amphiprion_ocellaris
ENSRNOG00000002612	Ddx52	99	60.743	ENSAPEG00000023456	ddx52	88	60.743	Amphiprion_percula
ENSRNOG00000002612	Ddx52	99	60.420	ENSATEG00000021525	ddx52	88	61.857	Anabas_testudineus
ENSRNOG00000002612	Ddx52	84	76.846	ENSACAG00000006395	DDX52	96	76.846	Anolis_carolinensis
ENSRNOG00000002612	Ddx52	100	87.500	ENSANAG00000028587	DDX52	100	87.500	Aotus_nancymaae
ENSRNOG00000002612	Ddx52	99	59.512	ENSACLG00000021447	ddx52	96	60.325	Astatotilapia_calliptera
ENSRNOG00000002612	Ddx52	95	63.884	ENSAMXG00000024377	ddx52	97	62.279	Astyanax_mexicanus
ENSRNOG00000002612	Ddx52	99	85.980	ENSBTAG00000010313	DDX52	99	85.980	Bos_taurus
ENSRNOG00000002612	Ddx52	75	42.918	WBGene00011032	R05D11.4	69	45.107	Caenorhabditis_elegans
ENSRNOG00000002612	Ddx52	100	86.500	ENSCJAG00000015190	DDX52	100	86.500	Callithrix_jacchus
ENSRNOG00000002612	Ddx52	100	87.708	ENSCAFG00000018145	-	100	87.708	Canis_familiaris
ENSRNOG00000002612	Ddx52	100	88.000	ENSCAFG00000013554	-	100	88.000	Canis_familiaris
ENSRNOG00000002612	Ddx52	96	89.081	ENSCAFG00020003753	DDX52	97	89.081	Canis_lupus_dingo
ENSRNOG00000002612	Ddx52	99	87.500	ENSCHIG00000006275	DDX52	100	87.801	Capra_hircus
ENSRNOG00000002612	Ddx52	100	88.333	ENSTSYG00000002996	DDX52	100	88.333	Carlito_syrichta
ENSRNOG00000002612	Ddx52	92	72.973	ENSCAPG00000010436	DDX52	100	72.072	Cavia_aperea
ENSRNOG00000002612	Ddx52	100	88.000	ENSCPOG00000001232	DDX52	100	88.000	Cavia_porcellus
ENSRNOG00000002612	Ddx52	100	87.500	ENSCCAG00000023213	DDX52	100	87.500	Cebus_capucinus
ENSRNOG00000002612	Ddx52	100	88.333	ENSCATG00000041437	DDX52	100	88.333	Cercocebus_atys
ENSRNOG00000002612	Ddx52	99	89.189	ENSCLAG00000016292	DDX52	99	89.189	Chinchilla_lanigera
ENSRNOG00000002612	Ddx52	100	87.833	ENSCSAG00000006122	DDX52	100	87.833	Chlorocebus_sabaeus
ENSRNOG00000002612	Ddx52	73	91.579	ENSCHOG00000007413	DDX52	73	91.579	Choloepus_hoffmanni
ENSRNOG00000002612	Ddx52	96	73.841	ENSCPBG00000009806	DDX52	99	72.134	Chrysemys_picta_bellii
ENSRNOG00000002612	Ddx52	77	50.524	ENSCING00000016218	-	100	50.524	Ciona_intestinalis
ENSRNOG00000002612	Ddx52	65	54.476	ENSCSAVG00000003835	-	98	54.271	Ciona_savignyi
ENSRNOG00000002612	Ddx52	100	87.500	ENSCANG00000035140	DDX52	100	87.500	Colobus_angolensis_palliatus
ENSRNOG00000002612	Ddx52	100	93.155	ENSCGRG00001020695	Ddx52	100	93.823	Cricetulus_griseus_chok1gshd
ENSRNOG00000002612	Ddx52	100	92.988	ENSCGRG00000008830	Ddx52	100	93.656	Cricetulus_griseus_crigri
ENSRNOG00000002612	Ddx52	99	59.869	ENSCSEG00000010008	ddx52	91	59.869	Cynoglossus_semilaevis
ENSRNOG00000002612	Ddx52	96	65.112	ENSCVAG00000005302	ddx52	100	64.548	Cyprinodon_variegatus
ENSRNOG00000002612	Ddx52	96	63.390	ENSDARG00000100505	ddx52	98	62.500	Danio_rerio
ENSRNOG00000002612	Ddx52	100	86.235	ENSDNOG00000047454	DDX52	100	86.235	Dasypus_novemcinctus
ENSRNOG00000002612	Ddx52	100	88.294	ENSDORG00000004276	Ddx52	100	88.294	Dipodomys_ordii
ENSRNOG00000002612	Ddx52	95	46.221	FBgn0036754	CG5589	88	47.368	Drosophila_melanogaster
ENSRNOG00000002612	Ddx52	99	79.561	ENSETEG00000016042	DDX52	99	79.730	Echinops_telfairi
ENSRNOG00000002612	Ddx52	64	42.537	ENSEBUG00000010838	-	91	43.829	Eptatretus_burgeri
ENSRNOG00000002612	Ddx52	99	87.270	ENSEASG00005011275	DDX52	92	87.270	Equus_asinus_asinus
ENSRNOG00000002612	Ddx52	100	87.667	ENSECAG00000012286	DDX52	100	87.667	Equus_caballus
ENSRNOG00000002612	Ddx52	72	100.000	ENSEEUG00000001153	DDX52	68	83.415	Erinaceus_europaeus
ENSRNOG00000002612	Ddx52	92	63.652	ENSELUG00000018002	ddx52	99	64.413	Esox_lucius
ENSRNOG00000002612	Ddx52	100	88.333	ENSFCAG00000010573	DDX52	100	88.333	Felis_catus
ENSRNOG00000002612	Ddx52	97	73.540	ENSFALG00000005155	DDX52	97	71.570	Ficedula_albicollis
ENSRNOG00000002612	Ddx52	100	86.545	ENSFDAG00000008340	-	100	86.545	Fukomys_damarensis
ENSRNOG00000002612	Ddx52	100	78.607	ENSFDAG00000011133	-	100	78.607	Fukomys_damarensis
ENSRNOG00000002612	Ddx52	99	61.576	ENSFHEG00000017239	ddx52	93	62.052	Fundulus_heteroclitus
ENSRNOG00000002612	Ddx52	96	60.309	ENSGMOG00000014879	ddx52	99	61.352	Gadus_morhua
ENSRNOG00000002612	Ddx52	97	74.701	ENSGALG00000005489	DDX52	98	72.517	Gallus_gallus
ENSRNOG00000002612	Ddx52	99	62.276	ENSGAFG00000000702	ddx52	95	61.750	Gambusia_affinis
ENSRNOG00000002612	Ddx52	99	62.023	ENSGACG00000020624	ddx52	99	70.000	Gasterosteus_aculeatus
ENSRNOG00000002612	Ddx52	96	73.179	ENSGAGG00000007234	DDX52	97	72.006	Gopherus_agassizii
ENSRNOG00000002612	Ddx52	100	88.167	ENSGGOG00000028224	DDX52	100	88.167	Gorilla_gorilla
ENSRNOG00000002612	Ddx52	99	59.711	ENSHBUG00000015638	ddx52	91	60.743	Haplochromis_burtoni
ENSRNOG00000002612	Ddx52	99	87.710	ENSHGLG00000006235	-	99	87.710	Heterocephalus_glaber_female
ENSRNOG00000002612	Ddx52	93	70.397	ENSHGLG00000019205	-	96	70.397	Heterocephalus_glaber_female
ENSRNOG00000002612	Ddx52	93	70.397	ENSHGLG00100018699	-	97	70.397	Heterocephalus_glaber_male
ENSRNOG00000002612	Ddx52	76	92.527	ENSHGLG00100013765	-	84	92.527	Heterocephalus_glaber_male
ENSRNOG00000002612	Ddx52	97	60.585	ENSHCOG00000007966	ddx52	95	60.103	Hippocampus_comes
ENSRNOG00000002612	Ddx52	96	60.732	ENSIPUG00000008623	ddx52	96	63.591	Ictalurus_punctatus
ENSRNOG00000002612	Ddx52	64	93.066	ENSSTOG00000002550	DDX52	99	93.066	Ictidomys_tridecemlineatus
ENSRNOG00000002612	Ddx52	100	89.149	ENSJJAG00000021877	Ddx52	100	89.149	Jaculus_jaculus
ENSRNOG00000002612	Ddx52	96	62.795	ENSKMAG00000022270	ddx52	97	74.372	Kryptolebias_marmoratus
ENSRNOG00000002612	Ddx52	100	59.516	ENSLBEG00000015403	ddx52	91	59.516	Labrus_bergylta
ENSRNOG00000002612	Ddx52	96	72.633	ENSLACG00000012514	DDX52	96	70.973	Latimeria_chalumnae
ENSRNOG00000002612	Ddx52	75	73.118	ENSLOCG00000005928	ddx52	96	70.833	Lepisosteus_oculatus
ENSRNOG00000002612	Ddx52	97	79.623	ENSLAFG00000002635	DDX52	100	95.128	Loxodonta_africana
ENSRNOG00000002612	Ddx52	100	88.333	ENSMFAG00000000640	DDX52	100	88.333	Macaca_fascicularis
ENSRNOG00000002612	Ddx52	100	88.000	ENSMMUG00000002980	DDX52	100	88.000	Macaca_mulatta
ENSRNOG00000002612	Ddx52	100	88.167	ENSMNEG00000043658	DDX52	100	88.167	Macaca_nemestrina
ENSRNOG00000002612	Ddx52	100	87.833	ENSMLEG00000017518	DDX52	100	87.833	Mandrillus_leucophaeus
ENSRNOG00000002612	Ddx52	99	61.412	ENSMAMG00000019719	ddx52	89	61.084	Mastacembelus_armatus
ENSRNOG00000002612	Ddx52	99	59.390	ENSMZEG00005019044	ddx52	91	60.420	Maylandia_zebra
ENSRNOG00000002612	Ddx52	91	76.190	ENSMGAG00000008091	DDX52	97	73.852	Meleagris_gallopavo
ENSRNOG00000002612	Ddx52	100	86.500	ENSMAUG00000021084	Ddx52	100	85.550	Mesocricetus_auratus
ENSRNOG00000002612	Ddx52	96	82.149	ENSMICG00000004290	-	99	82.149	Microcebus_murinus
ENSRNOG00000002612	Ddx52	100	92.821	ENSMOCG00000009654	Ddx52	100	93.322	Microtus_ochrogaster
ENSRNOG00000002612	Ddx52	99	60.496	ENSMMOG00000018825	ddx52	91	60.833	Mola_mola
ENSRNOG00000002612	Ddx52	99	79.867	ENSMODG00000002493	DDX52	98	79.867	Monodelphis_domestica
ENSRNOG00000002612	Ddx52	80	68.828	ENSMALG00000007621	ddx52	81	68.542	Monopterus_albus
ENSRNOG00000002612	Ddx52	100	94.983	MGP_CAROLIEiJ_G0016888	Ddx52	100	94.983	Mus_caroli
ENSRNOG00000002612	Ddx52	100	94.816	ENSMUSG00000020677	Ddx52	100	94.816	Mus_musculus
ENSRNOG00000002612	Ddx52	100	95.485	MGP_PahariEiJ_G0018018	Ddx52	100	95.485	Mus_pahari
ENSRNOG00000002612	Ddx52	100	94.816	MGP_SPRETEiJ_G0017733	Ddx52	100	94.816	Mus_spretus
ENSRNOG00000002612	Ddx52	100	88.500	ENSMPUG00000015007	DDX52	100	88.500	Mustela_putorius_furo
ENSRNOG00000002612	Ddx52	100	86.023	ENSMLUG00000007167	-	100	86.190	Myotis_lucifugus
ENSRNOG00000002612	Ddx52	82	89.817	ENSMLUG00000024480	-	98	91.286	Myotis_lucifugus
ENSRNOG00000002612	Ddx52	100	90.301	ENSNGAG00000020686	Ddx52	100	90.301	Nannospalax_galili
ENSRNOG00000002612	Ddx52	82	68.496	ENSNBRG00000007750	ddx52	88	67.936	Neolamprologus_brichardi
ENSRNOG00000002612	Ddx52	100	87.667	ENSNLEG00000002826	DDX52	100	87.667	Nomascus_leucogenys
ENSRNOG00000002612	Ddx52	65	89.487	ENSMEUG00000011234	DDX52	98	89.487	Notamacropus_eugenii
ENSRNOG00000002612	Ddx52	100	77.243	ENSOPRG00000003899	DDX52	100	77.575	Ochotona_princeps
ENSRNOG00000002612	Ddx52	99	81.481	ENSODEG00000002857	-	99	81.145	Octodon_degus
ENSRNOG00000002612	Ddx52	97	84.364	ENSODEG00000012814	-	100	84.364	Octodon_degus
ENSRNOG00000002612	Ddx52	99	59.903	ENSONIG00000004869	ddx52	97	60.948	Oreochromis_niloticus
ENSRNOG00000002612	Ddx52	94	78.621	ENSOANG00000007133	DDX52	97	78.103	Ornithorhynchus_anatinus
ENSRNOG00000002612	Ddx52	100	86.667	ENSOCUG00000014532	DDX52	100	86.667	Oryctolagus_cuniculus
ENSRNOG00000002612	Ddx52	96	63.714	ENSORLG00000005241	ddx52	93	61.601	Oryzias_latipes
ENSRNOG00000002612	Ddx52	96	63.311	ENSORLG00015015546	ddx52	89	62.149	Oryzias_latipes_hsok
ENSRNOG00000002612	Ddx52	99	61.111	ENSOMEG00000017602	ddx52	92	61.601	Oryzias_melastigma
ENSRNOG00000002612	Ddx52	97	84.021	ENSOGAG00000000868	DDX52	99	84.021	Otolemur_garnettii
ENSRNOG00000002612	Ddx52	99	87.838	ENSOARG00000002998	DDX52	99	87.838	Ovis_aries
ENSRNOG00000002612	Ddx52	100	86.833	ENSPPAG00000028453	DDX52	100	86.833	Pan_paniscus
ENSRNOG00000002612	Ddx52	100	87.167	ENSPPRG00000009742	DDX52	100	87.167	Panthera_pardus
ENSRNOG00000002612	Ddx52	100	87.000	ENSPTIG00000013697	DDX52	100	87.000	Panthera_tigris_altaica
ENSRNOG00000002612	Ddx52	100	87.833	ENSPTRG00000009058	DDX52	100	87.833	Pan_troglodytes
ENSRNOG00000002612	Ddx52	100	88.000	ENSPANG00000022101	DDX52	100	88.000	Papio_anubis
ENSRNOG00000002612	Ddx52	98	63.113	ENSPKIG00000013058	ddx52	98	63.805	Paramormyrops_kingsleyae
ENSRNOG00000002612	Ddx52	96	74.829	ENSPSIG00000010226	DDX52	99	73.466	Pelodiscus_sinensis
ENSRNOG00000002612	Ddx52	78	68.737	ENSPMGG00000005458	ddx52	94	68.094	Periophthalmus_magnuspinnatus
ENSRNOG00000002612	Ddx52	100	92.487	ENSPEMG00000003263	Ddx52	100	92.487	Peromyscus_maniculatus_bairdii
ENSRNOG00000002612	Ddx52	99	79.167	ENSPCIG00000017730	DDX52	90	79.167	Phascolarctos_cinereus
ENSRNOG00000002612	Ddx52	96	63.543	ENSPFOG00000018378	ddx52	92	61.501	Poecilia_formosa
ENSRNOG00000002612	Ddx52	96	63.543	ENSPLAG00000008368	ddx52	92	61.501	Poecilia_latipinna
ENSRNOG00000002612	Ddx52	96	63.543	ENSPMEG00000002359	ddx52	92	61.678	Poecilia_mexicana
ENSRNOG00000002612	Ddx52	96	63.203	ENSPREG00000016874	ddx52	92	62.417	Poecilia_reticulata
ENSRNOG00000002612	Ddx52	100	87.687	ENSPPYG00000008221	DDX52	100	87.687	Pongo_abelii
ENSRNOG00000002612	Ddx52	98	76.988	ENSPCAG00000005814	DDX52	99	76.988	Procavia_capensis
ENSRNOG00000002612	Ddx52	100	86.167	ENSPVAG00000010462	DDX52	100	86.167	Pteropus_vampyrus
ENSRNOG00000002612	Ddx52	99	61.525	ENSPNYG00000020730	ddx52	96	62.392	Pundamilia_nyererei
ENSRNOG00000002612	Ddx52	96	62.626	ENSPNAG00000014707	ddx52	96	62.876	Pygocentrus_nattereri
ENSRNOG00000002612	Ddx52	100	80.500	ENSRBIG00000032462	DDX52	100	80.500	Rhinopithecus_bieti
ENSRNOG00000002612	Ddx52	100	81.500	ENSRROG00000034760	DDX52	100	81.500	Rhinopithecus_roxellana
ENSRNOG00000002612	Ddx52	99	40.681	YGL171W	-	99	40.258	Saccharomyces_cerevisiae
ENSRNOG00000002612	Ddx52	100	86.500	ENSSBOG00000035787	DDX52	100	86.333	Saimiri_boliviensis_boliviensis
ENSRNOG00000002612	Ddx52	99	79.368	ENSSHAG00000013962	DDX52	97	79.368	Sarcophilus_harrisii
ENSRNOG00000002612	Ddx52	99	63.005	ENSSFOG00015005055	ddx52	99	63.311	Scleropages_formosus
ENSRNOG00000002612	Ddx52	96	60.762	ENSSMAG00000009788	ddx52	91	61.452	Scophthalmus_maximus
ENSRNOG00000002612	Ddx52	96	62.901	ENSSDUG00000004022	ddx52	91	62.046	Seriola_dumerili
ENSRNOG00000002612	Ddx52	96	63.621	ENSSLDG00000016999	ddx52	93	61.364	Seriola_lalandi_dorsalis
ENSRNOG00000002612	Ddx52	75	97.143	ENSSARG00000000371	-	74	97.059	Sorex_araneus
ENSRNOG00000002612	Ddx52	96	73.675	ENSSPUG00000000720	DDX52	97	72.903	Sphenodon_punctatus
ENSRNOG00000002612	Ddx52	96	61.730	ENSSPAG00000014211	ddx52	88	60.737	Stegastes_partitus
ENSRNOG00000002612	Ddx52	99	88.702	ENSSSCG00000021275	DDX52	99	88.702	Sus_scrofa
ENSRNOG00000002612	Ddx52	97	73.846	ENSTGUG00000008303	-	100	73.846	Taeniopygia_guttata
ENSRNOG00000002612	Ddx52	100	60.420	ENSTRUG00000017071	ddx52	89	60.193	Takifugu_rubripes
ENSRNOG00000002612	Ddx52	99	63.149	ENSTNIG00000009990	ddx52	100	62.647	Tetraodon_nigroviridis
ENSRNOG00000002612	Ddx52	76	78.893	ENSTBEG00000005982	DDX52	76	78.893	Tupaia_belangeri
ENSRNOG00000002612	Ddx52	100	87.667	ENSTTRG00000008917	DDX52	100	87.667	Tursiops_truncatus
ENSRNOG00000002612	Ddx52	100	87.167	ENSVPAG00000001979	DDX52	100	87.167	Vicugna_pacos
ENSRNOG00000002612	Ddx52	100	88.333	ENSVVUG00000020209	DDX52	99	92.653	Vulpes_vulpes
ENSRNOG00000002612	Ddx52	97	71.477	ENSXETG00000025903	ddx52	100	71.817	Xenopus_tropicalis
ENSRNOG00000002612	Ddx52	99	62.602	ENSXMAG00000010805	ddx52	93	62.723	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003724	RNA helicase activity	9154839.	NAS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0006364	rRNA processing	9154839.	TAS	Process