EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002695 (Gene tree)
Gene ID: 289307
Gene Symbol: Tfb2m
Alias: LOC289307|mtTFB2
Full Name: transcription factor B2%2C mitochondrial
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 17736 bases
Position: chr13:97820493-97838228
Accession: 1307091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003618	RrnaAD	PF00398.20	3.1e-20	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003618	-	2067	XM_008769817	ENSRNOP00000003618	397 (aa)	XP_008768039	Q5U2T7

Gene Model

Click here to download ENSRNOG00000002695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002695's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002695	Tfb2m	97	54.639	ENSG00000162851	TFB2M	98	54.639	Homo_sapiens
ENSRNOG00000002695	Tfb2m	82	37.910	ENSAPOG00000020846	tfb2m	73	37.910	Acanthochromis_polyacanthus
ENSRNOG00000002695	Tfb2m	97	50.886	ENSAMEG00000006593	TFB2M	98	50.886	Ailuropoda_melanoleuca
ENSRNOG00000002695	Tfb2m	82	39.763	ENSACIG00000008758	tfb2m	74	39.763	Amphilophus_citrinellus
ENSRNOG00000002695	Tfb2m	82	39.634	ENSAOCG00000008467	tfb2m	71	39.634	Amphiprion_ocellaris
ENSRNOG00000002695	Tfb2m	82	39.634	ENSAPEG00000004298	tfb2m	71	39.634	Amphiprion_percula
ENSRNOG00000002695	Tfb2m	79	38.486	ENSATEG00000020372	tfb2m	69	38.486	Anabas_testudineus
ENSRNOG00000002695	Tfb2m	84	46.291	ENSACAG00000011940	TFB2M	99	46.291	Anolis_carolinensis
ENSRNOG00000002695	Tfb2m	96	52.604	ENSANAG00000038040	TFB2M	96	52.604	Aotus_nancymaae
ENSRNOG00000002695	Tfb2m	82	38.485	ENSACLG00000009801	tfb2m	71	38.485	Astatotilapia_calliptera
ENSRNOG00000002695	Tfb2m	85	37.500	ENSAMXG00000001243	tfb2m	85	37.500	Astyanax_mexicanus
ENSRNOG00000002695	Tfb2m	98	52.956	ENSBTAG00000000072	TFB2M	98	52.956	Bos_taurus
ENSRNOG00000002695	Tfb2m	96	52.713	ENSCJAG00000016845	TFB2M	97	52.713	Callithrix_jacchus
ENSRNOG00000002695	Tfb2m	98	50.886	ENSCAFG00000032694	TFB2M	98	50.886	Canis_familiaris
ENSRNOG00000002695	Tfb2m	98	50.886	ENSCAFG00020001084	TFB2M	98	50.886	Canis_lupus_dingo
ENSRNOG00000002695	Tfb2m	98	52.185	ENSCHIG00000017458	TFB2M	98	52.185	Capra_hircus
ENSRNOG00000002695	Tfb2m	98	59.744	ENSTSYG00000010006	TFB2M	98	59.744	Carlito_syrichta
ENSRNOG00000002695	Tfb2m	99	44.697	ENSCPOG00000013225	-	99	44.697	Cavia_porcellus
ENSRNOG00000002695	Tfb2m	96	53.906	ENSCCAG00000028811	TFB2M	96	53.906	Cebus_capucinus
ENSRNOG00000002695	Tfb2m	91	46.154	ENSCATG00000043081	-	98	46.907	Cercocebus_atys
ENSRNOG00000002695	Tfb2m	97	49.742	ENSCATG00000041118	TFB2M	98	49.742	Cercocebus_atys
ENSRNOG00000002695	Tfb2m	98	47.315	ENSCLAG00000008614	TFB2M	98	47.315	Chinchilla_lanigera
ENSRNOG00000002695	Tfb2m	97	56.186	ENSCSAG00000009135	TFB2M	98	56.186	Chlorocebus_sabaeus
ENSRNOG00000002695	Tfb2m	98	50.900	ENSCHOG00000001296	TFB2M	97	50.900	Choloepus_hoffmanni
ENSRNOG00000002695	Tfb2m	82	45.015	ENSCPBG00000016975	TFB2M	93	41.667	Chrysemys_picta_bellii
ENSRNOG00000002695	Tfb2m	85	52.059	ENSCANG00000023198	-	93	52.059	Colobus_angolensis_palliatus
ENSRNOG00000002695	Tfb2m	99	72.335	ENSCGRG00001000953	Tfb2m	99	72.335	Cricetulus_griseus_chok1gshd
ENSRNOG00000002695	Tfb2m	99	72.335	ENSCGRG00000013379	Tfb2m	99	72.335	Cricetulus_griseus_crigri
ENSRNOG00000002695	Tfb2m	89	33.242	ENSCSEG00000008303	TFB2M	82	33.242	Cynoglossus_semilaevis
ENSRNOG00000002695	Tfb2m	82	36.970	ENSCVAG00000010328	tfb2m	72	36.970	Cyprinodon_variegatus
ENSRNOG00000002695	Tfb2m	73	42.662	ENSDARG00000074756	tfb2m	66	42.662	Danio_rerio
ENSRNOG00000002695	Tfb2m	99	55.362	ENSDNOG00000035182	TFB2M	99	55.362	Dasypus_novemcinctus
ENSRNOG00000002695	Tfb2m	99	56.423	ENSDORG00000026012	Tfb2m	99	56.423	Dipodomys_ordii
ENSRNOG00000002695	Tfb2m	83	46.201	ENSETEG00000007294	-	97	46.201	Echinops_telfairi
ENSRNOG00000002695	Tfb2m	96	60.313	ENSEASG00005005729	TFB2M	96	60.313	Equus_asinus_asinus
ENSRNOG00000002695	Tfb2m	96	60.836	ENSECAG00000016462	TFB2M	96	60.836	Equus_caballus
ENSRNOG00000002695	Tfb2m	80	43.260	ENSELUG00000002046	tfb2m	94	39.710	Esox_lucius
ENSRNOG00000002695	Tfb2m	97	53.747	ENSFCAG00000021951	TFB2M	97	56.884	Felis_catus
ENSRNOG00000002695	Tfb2m	78	44.231	ENSFALG00000011573	TFB2M	93	44.231	Ficedula_albicollis
ENSRNOG00000002695	Tfb2m	98	47.436	ENSFDAG00000005822	TFB2M	98	47.436	Fukomys_damarensis
ENSRNOG00000002695	Tfb2m	82	38.507	ENSFHEG00000019185	tfb2m	74	38.507	Fundulus_heteroclitus
ENSRNOG00000002695	Tfb2m	58	33.624	ENSGMOG00000013664	tfb2m	97	33.624	Gadus_morhua
ENSRNOG00000002695	Tfb2m	80	45.597	ENSGALG00000010651	TFB2M	80	45.597	Gallus_gallus
ENSRNOG00000002695	Tfb2m	80	38.679	ENSGAFG00000008503	tfb2m	69	38.679	Gambusia_affinis
ENSRNOG00000002695	Tfb2m	56	37.838	ENSGACG00000016236	tfb2m	94	37.838	Gasterosteus_aculeatus
ENSRNOG00000002695	Tfb2m	80	43.082	ENSGAGG00000023556	TFB2M	76	43.082	Gopherus_agassizii
ENSRNOG00000002695	Tfb2m	97	54.897	ENSGGOG00000001095	TFB2M	98	54.897	Gorilla_gorilla
ENSRNOG00000002695	Tfb2m	82	38.393	ENSHBUG00000000565	tfb2m	73	38.393	Haplochromis_burtoni
ENSRNOG00000002695	Tfb2m	99	48.990	ENSHGLG00000015476	-	99	48.990	Heterocephalus_glaber_female
ENSRNOG00000002695	Tfb2m	99	48.990	ENSHGLG00100004104	-	99	48.990	Heterocephalus_glaber_male
ENSRNOG00000002695	Tfb2m	81	38.554	ENSHCOG00000018851	tfb2m	72	38.554	Hippocampus_comes
ENSRNOG00000002695	Tfb2m	77	44.268	ENSIPUG00000015951	TFB2M	72	44.268	Ictalurus_punctatus
ENSRNOG00000002695	Tfb2m	99	53.030	ENSSTOG00000034162	TFB2M	100	53.030	Ictidomys_tridecemlineatus
ENSRNOG00000002695	Tfb2m	99	58.228	ENSJJAG00000019285	Tfb2m	99	58.228	Jaculus_jaculus
ENSRNOG00000002695	Tfb2m	81	36.937	ENSKMAG00000019736	tfb2m	74	36.937	Kryptolebias_marmoratus
ENSRNOG00000002695	Tfb2m	96	33.333	ENSLBEG00000003846	tfb2m	93	33.333	Labrus_bergylta
ENSRNOG00000002695	Tfb2m	55	43.119	ENSLACG00000016461	tfb2m	97	39.181	Latimeria_chalumnae
ENSRNOG00000002695	Tfb2m	79	44.164	ENSLOCG00000016646	tfb2m	75	44.164	Lepisosteus_oculatus
ENSRNOG00000002695	Tfb2m	98	56.423	ENSLAFG00000015061	TFB2M	98	56.423	Loxodonta_africana
ENSRNOG00000002695	Tfb2m	97	57.216	ENSMFAG00000000959	TFB2M	98	57.216	Macaca_fascicularis
ENSRNOG00000002695	Tfb2m	97	56.443	ENSMMUG00000022915	TFB2M	98	56.443	Macaca_mulatta
ENSRNOG00000002695	Tfb2m	92	46.301	ENSMMUG00000041253	-	98	47.044	Macaca_mulatta
ENSRNOG00000002695	Tfb2m	92	44.231	ENSMNEG00000045067	-	98	45.103	Macaca_nemestrina
ENSRNOG00000002695	Tfb2m	97	57.216	ENSMNEG00000034600	TFB2M	98	57.216	Macaca_nemestrina
ENSRNOG00000002695	Tfb2m	97	56.701	ENSMLEG00000031716	TFB2M	98	56.701	Mandrillus_leucophaeus
ENSRNOG00000002695	Tfb2m	82	37.237	ENSMAMG00000020525	tfb2m	67	37.237	Mastacembelus_armatus
ENSRNOG00000002695	Tfb2m	82	38.485	ENSMZEG00005010491	tfb2m	71	38.485	Maylandia_zebra
ENSRNOG00000002695	Tfb2m	72	46.154	ENSMGAG00000011408	TFB2M	96	46.154	Meleagris_gallopavo
ENSRNOG00000002695	Tfb2m	98	73.146	ENSMAUG00000015170	Tfb2m	98	73.146	Mesocricetus_auratus
ENSRNOG00000002695	Tfb2m	98	59.126	ENSMICG00000016790	TFB2M	97	59.126	Microcebus_murinus
ENSRNOG00000002695	Tfb2m	99	72.335	ENSMOCG00000016864	Tfb2m	99	72.335	Microtus_ochrogaster
ENSRNOG00000002695	Tfb2m	82	38.532	ENSMMOG00000001118	tfb2m	73	38.532	Mola_mola
ENSRNOG00000002695	Tfb2m	71	46.479	ENSMODG00000029299	-	97	46.479	Monodelphis_domestica
ENSRNOG00000002695	Tfb2m	82	38.623	ENSMALG00000007148	tfb2m	73	38.623	Monopterus_albus
ENSRNOG00000002695	Tfb2m	100	87.406	MGP_CAROLIEiJ_G0014967	-	100	87.406	Mus_caroli
ENSRNOG00000002695	Tfb2m	100	87.406	MGP_CAROLIEiJ_G0014966	-	100	87.406	Mus_caroli
ENSRNOG00000002695	Tfb2m	100	87.657	ENSMUSG00000026492	Tfb2m	100	87.657	Mus_musculus
ENSRNOG00000002695	Tfb2m	100	85.642	MGP_PahariEiJ_G0028197	-	100	85.642	Mus_pahari
ENSRNOG00000002695	Tfb2m	100	88.413	MGP_SPRETEiJ_G0015765	-	100	88.413	Mus_spretus
ENSRNOG00000002695	Tfb2m	97	50.510	ENSMPUG00000015810	TFB2M	98	50.510	Mustela_putorius_furo
ENSRNOG00000002695	Tfb2m	97	47.423	ENSMLUG00000003923	TFB2M	97	47.423	Myotis_lucifugus
ENSRNOG00000002695	Tfb2m	99	70.812	ENSNGAG00000018240	Tfb2m	99	70.812	Nannospalax_galili
ENSRNOG00000002695	Tfb2m	56	43.836	ENSNBRG00000003110	-	61	43.836	Neolamprologus_brichardi
ENSRNOG00000002695	Tfb2m	59	43.154	ENSNBRG00000000213	tfb2m	97	43.154	Neolamprologus_brichardi
ENSRNOG00000002695	Tfb2m	97	55.928	ENSNLEG00000004146	TFB2M	98	55.928	Nomascus_leucogenys
ENSRNOG00000002695	Tfb2m	99	48.232	ENSODEG00000013735	-	99	48.872	Octodon_degus
ENSRNOG00000002695	Tfb2m	82	38.988	ENSONIG00000017120	tfb2m	73	38.988	Oreochromis_niloticus
ENSRNOG00000002695	Tfb2m	75	46.622	ENSOANG00000010246	-	98	46.853	Ornithorhynchus_anatinus
ENSRNOG00000002695	Tfb2m	88	62.000	ENSOCUG00000022792	-	97	59.845	Oryctolagus_cuniculus
ENSRNOG00000002695	Tfb2m	92	61.853	ENSOCUG00000013727	-	97	61.399	Oryctolagus_cuniculus
ENSRNOG00000002695	Tfb2m	80	38.050	ENSORLG00000011263	tfb2m	55	38.050	Oryzias_latipes
ENSRNOG00000002695	Tfb2m	82	37.313	ENSORLG00020003041	tfb2m	73	37.313	Oryzias_latipes_hni
ENSRNOG00000002695	Tfb2m	82	37.313	ENSORLG00015001311	tfb2m	73	37.313	Oryzias_latipes_hsok
ENSRNOG00000002695	Tfb2m	80	39.252	ENSOMEG00000010814	tfb2m	69	39.252	Oryzias_melastigma
ENSRNOG00000002695	Tfb2m	98	56.923	ENSOGAG00000007823	TFB2M	98	56.923	Otolemur_garnettii
ENSRNOG00000002695	Tfb2m	98	53.213	ENSOARG00000004242	-	98	53.213	Ovis_aries
ENSRNOG00000002695	Tfb2m	75	51.462	ENSOARG00000020149	-	97	51.462	Ovis_aries
ENSRNOG00000002695	Tfb2m	97	54.897	ENSPPAG00000036577	TFB2M	98	54.897	Pan_paniscus
ENSRNOG00000002695	Tfb2m	97	53.747	ENSPPRG00000007350	TFB2M	98	53.747	Panthera_pardus
ENSRNOG00000002695	Tfb2m	97	53.230	ENSPTIG00000007649	TFB2M	98	53.230	Panthera_tigris_altaica
ENSRNOG00000002695	Tfb2m	97	54.897	ENSPTRG00000002188	TFB2M	98	54.897	Pan_troglodytes
ENSRNOG00000002695	Tfb2m	97	55.297	ENSPANG00000024989	TFB2M	90	55.297	Papio_anubis
ENSRNOG00000002695	Tfb2m	97	46.134	ENSPANG00000033033	-	98	46.134	Papio_anubis
ENSRNOG00000002695	Tfb2m	80	41.875	ENSPKIG00000007071	tfb2m	72	41.875	Paramormyrops_kingsleyae
ENSRNOG00000002695	Tfb2m	70	45.848	ENSPSIG00000005507	TFB2M	95	45.848	Pelodiscus_sinensis
ENSRNOG00000002695	Tfb2m	88	36.464	ENSPMGG00000002042	tfb2m	81	36.464	Periophthalmus_magnuspinnatus
ENSRNOG00000002695	Tfb2m	99	72.589	ENSPEMG00000018713	Tfb2m	99	72.589	Peromyscus_maniculatus_bairdii
ENSRNOG00000002695	Tfb2m	79	34.375	ENSPMAG00000007459	tfb2m	95	34.375	Petromyzon_marinus
ENSRNOG00000002695	Tfb2m	98	44.081	ENSPCIG00000003268	-	96	44.081	Phascolarctos_cinereus
ENSRNOG00000002695	Tfb2m	83	37.462	ENSPFOG00000010834	tfb2m	84	37.462	Poecilia_formosa
ENSRNOG00000002695	Tfb2m	83	35.952	ENSPLAG00000000382	tfb2m	72	35.952	Poecilia_latipinna
ENSRNOG00000002695	Tfb2m	80	38.679	ENSPMEG00000011437	tfb2m	69	38.679	Poecilia_mexicana
ENSRNOG00000002695	Tfb2m	83	37.764	ENSPREG00000010841	tfb2m	73	37.764	Poecilia_reticulata
ENSRNOG00000002695	Tfb2m	97	55.155	ENSPPYG00000000046	TFB2M	98	55.155	Pongo_abelii
ENSRNOG00000002695	Tfb2m	83	59.517	ENSPCAG00000014525	TFB2M	98	59.517	Procavia_capensis
ENSRNOG00000002695	Tfb2m	98	56.410	ENSPCOG00000017595	TFB2M	97	56.410	Propithecus_coquereli
ENSRNOG00000002695	Tfb2m	97	56.443	ENSPVAG00000000353	TFB2M	98	56.443	Pteropus_vampyrus
ENSRNOG00000002695	Tfb2m	80	38.906	ENSPNYG00000017560	tfb2m	71	38.906	Pundamilia_nyererei
ENSRNOG00000002695	Tfb2m	73	45.734	ENSPNAG00000006270	tfb2m	56	45.734	Pygocentrus_nattereri
ENSRNOG00000002695	Tfb2m	99	44.081	ENSRBIG00000032518	-	100	44.081	Rhinopithecus_bieti
ENSRNOG00000002695	Tfb2m	98	55.784	ENSRBIG00000007430	TFB2M	98	55.784	Rhinopithecus_bieti
ENSRNOG00000002695	Tfb2m	98	55.527	ENSRROG00000011991	TFB2M	98	55.527	Rhinopithecus_roxellana
ENSRNOG00000002695	Tfb2m	96	50.781	ENSSBOG00000033950	TFB2M	96	50.781	Saimiri_boliviensis_boliviensis
ENSRNOG00000002695	Tfb2m	100	43.500	ENSSHAG00000010044	-	99	43.500	Sarcophilus_harrisii
ENSRNOG00000002695	Tfb2m	86	41.360	ENSSFOG00015019107	tfb2m	78	41.360	Scleropages_formosus
ENSRNOG00000002695	Tfb2m	86	41.076	ENSSFOG00015019121	tfb2m	78	41.076	Scleropages_formosus
ENSRNOG00000002695	Tfb2m	80	38.037	ENSSMAG00000005476	tfb2m	72	38.037	Scophthalmus_maximus
ENSRNOG00000002695	Tfb2m	82	36.826	ENSSDUG00000001650	tfb2m	74	36.826	Seriola_dumerili
ENSRNOG00000002695	Tfb2m	82	37.425	ENSSLDG00000024489	tfb2m	75	37.425	Seriola_lalandi_dorsalis
ENSRNOG00000002695	Tfb2m	85	52.071	ENSSARG00000003285	TFB2M	85	52.071	Sorex_araneus
ENSRNOG00000002695	Tfb2m	76	45.183	ENSSPUG00000011591	TFB2M	75	45.183	Sphenodon_punctatus
ENSRNOG00000002695	Tfb2m	82	38.690	ENSSPAG00000010535	tfb2m	73	38.690	Stegastes_partitus
ENSRNOG00000002695	Tfb2m	98	52.185	ENSSSCG00000023775	TFB2M	98	53.153	Sus_scrofa
ENSRNOG00000002695	Tfb2m	78	44.516	ENSTGUG00000008396	TFB2M	94	44.516	Taeniopygia_guttata
ENSRNOG00000002695	Tfb2m	82	34.835	ENSTRUG00000010411	tfb2m	74	34.835	Takifugu_rubripes
ENSRNOG00000002695	Tfb2m	82	38.226	ENSTNIG00000017700	tfb2m	99	38.226	Tetraodon_nigroviridis
ENSRNOG00000002695	Tfb2m	97	51.031	ENSTBEG00000008705	TFB2M	98	51.031	Tupaia_belangeri
ENSRNOG00000002695	Tfb2m	97	48.312	ENSTTRG00000005299	TFB2M	97	48.312	Tursiops_truncatus
ENSRNOG00000002695	Tfb2m	65	54.264	ENSUAMG00000009323	-	89	54.264	Ursus_americanus
ENSRNOG00000002695	Tfb2m	97	51.531	ENSUMAG00000013324	TFB2M	98	51.531	Ursus_maritimus
ENSRNOG00000002695	Tfb2m	94	55.851	ENSVPAG00000009586	TFB2M	98	56.041	Vicugna_pacos
ENSRNOG00000002695	Tfb2m	75	51.656	ENSVVUG00000000650	-	79	51.656	Vulpes_vulpes
ENSRNOG00000002695	Tfb2m	75	45.667	ENSXETG00000033343	TFB2M	82	45.667	Xenopus_tropicalis
ENSRNOG00000002695	Tfb2m	93	34.286	ENSXCOG00000012233	tfb2m	81	36.585	Xiphophorus_couchianus
ENSRNOG00000002695	Tfb2m	80	38.679	ENSXMAG00000017710	tfb2m	69	38.679	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity	21873635.	IBA	Function
GO:0003712	transcription coregulator activity	-	IEA	Function
GO:0003712	transcription coregulator activity	-	ISO	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006390	mitochondrial transcription	21873635.	IBA	Process
GO:0006390	mitochondrial transcription	-	ISO	Process
GO:0006391	transcription initiation from mitochondrial promoter	-	ISO	Process
GO:0006391	transcription initiation from mitochondrial promoter	-	ISS	Process
GO:0031167	rRNA methylation	21873635.	IBA	Process
GO:0042645	mitochondrial nucleoid	-	IEA	Component
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISS	Process