EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002871 (Gene tree)
Gene ID: 497865
Gene Symbol: Rbm25l1
Alias: LOC497865|RGD1565486
Full Name: RNA binding motif protein 25-like 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 3437 bases
Position: chr10:10457320-10460756
Accession: 1565486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003832	RRM_1	PF00076.22	6.7e-09	1	1
ENSRNOP00000003832	PWI	PF01480.17	5.8e-14	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003832	-	3437	XM_003750770	ENSRNOP00000003832	817 (aa)	XP_003750818	D3Z8R4

Gene Model

Click here to download ENSRNOG00000002871's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002871	Rbm25l1	50	98.768	ENSG00000119707	RBM25	100	99.213	Homo_sapiens
ENSRNOG00000002871	Rbm25l1	55	74.786	ENSAPOG00000017757	rbm25a	54	76.316	Acanthochromis_polyacanthus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSAMEG00000016270	RBM25	100	94.856	Ailuropoda_melanoleuca
ENSRNOG00000002871	Rbm25l1	54	64.718	ENSACIG00000014178	rbm25b	53	66.742	Amphilophus_citrinellus
ENSRNOG00000002871	Rbm25l1	51	78.923	ENSAOCG00000013695	rbm25a	52	77.349	Amphiprion_ocellaris
ENSRNOG00000002871	Rbm25l1	51	78.923	ENSAPEG00000007514	rbm25a	53	77.349	Amphiprion_percula
ENSRNOG00000002871	Rbm25l1	53	74.576	ENSATEG00000020676	rbm25a	54	68.849	Anabas_testudineus
ENSRNOG00000002871	Rbm25l1	50	95.556	ENSAPLG00000006643	RBM25	52	95.556	Anas_platyrhynchos
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSANAG00000028295	RBM25	99	98.966	Aotus_nancymaae
ENSRNOG00000002871	Rbm25l1	54	72.651	ENSACLG00000024359	rbm25b	54	72.336	Astatotilapia_calliptera
ENSRNOG00000002871	Rbm25l1	83	74.740	ENSAMXG00000024525	rbm25b	53	74.658	Astyanax_mexicanus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSBTAG00000017177	RBM25	100	94.313	Bos_taurus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSCJAG00000014441	-	99	98.966	Callithrix_jacchus
ENSRNOG00000002871	Rbm25l1	50	98.522	ENSTSYG00000003024	RBM25	99	98.966	Carlito_syrichta
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSCPOG00000002479	RBM25	100	94.194	Cavia_porcellus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSCATG00000039651	RBM25	99	98.966	Cercocebus_atys
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSCLAG00000003977	RBM25	100	94.076	Chinchilla_lanigera
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSCSAG00000012801	RBM25	100	94.313	Chlorocebus_sabaeus
ENSRNOG00000002871	Rbm25l1	65	100.000	ENSCHOG00000008903	RBM25	63	100.000	Choloepus_hoffmanni
ENSRNOG00000002871	Rbm25l1	50	90.887	ENSCANG00000043874	RBM25	99	98.621	Colobus_angolensis_palliatus
ENSRNOG00000002871	Rbm25l1	100	96.548	ENSCGRG00000017595	Rbm25	100	94.643	Cricetulus_griseus_crigri
ENSRNOG00000002871	Rbm25l1	55	71.868	ENSCSEG00000020737	rbm25b	52	74.396	Cynoglossus_semilaevis
ENSRNOG00000002871	Rbm25l1	54	67.216	ENSCVAG00000003478	rbm25b	54	67.873	Cyprinodon_variegatus
ENSRNOG00000002871	Rbm25l1	50	98.768	ENSDNOG00000004959	RBM25	100	94.194	Dasypus_novemcinctus
ENSRNOG00000002871	Rbm25l1	50	94.335	ENSETEG00000015941	RBM25	100	90.499	Echinops_telfairi
ENSRNOG00000002871	Rbm25l1	100	86.659	ENSEEUG00000007350	RBM25	100	86.068	Erinaceus_europaeus
ENSRNOG00000002871	Rbm25l1	54	69.838	ENSELUG00000007730	rbm25b	59	79.839	Esox_lucius
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSFCAG00000011716	RBM25	99	98.966	Felis_catus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSFDAG00000006542	RBM25	100	94.194	Fukomys_damarensis
ENSRNOG00000002871	Rbm25l1	54	70.625	ENSFHEG00000003513	rbm25b	55	71.267	Fundulus_heteroclitus
ENSRNOG00000002871	Rbm25l1	78	74.328	ENSGMOG00000014070	rbm25a	85	72.619	Gadus_morhua
ENSRNOG00000002871	Rbm25l1	95	50.687	ENSGMOG00000014097	rbm25b	89	67.331	Gadus_morhua
ENSRNOG00000002871	Rbm25l1	100	69.314	ENSGAFG00000001092	rbm25b	50	71.913	Gambusia_affinis
ENSRNOG00000002871	Rbm25l1	54	76.535	ENSGAFG00000018036	rbm25a	52	77.033	Gambusia_affinis
ENSRNOG00000002871	Rbm25l1	50	98.768	ENSGGOG00000002415	RBM25	99	98.966	Gorilla_gorilla
ENSRNOG00000002871	Rbm25l1	52	78.670	ENSHBUG00000016908	rbm25a	50	78.261	Haplochromis_burtoni
ENSRNOG00000002871	Rbm25l1	50	98.522	ENSHGLG00000014745	RBM25	100	93.957	Heterocephalus_glaber_female
ENSRNOG00000002871	Rbm25l1	100	93.032	ENSHGLG00100018236	-	100	98.974	Heterocephalus_glaber_male
ENSRNOG00000002871	Rbm25l1	100	68.940	ENSHCOG00000000142	rbm25b	52	75.735	Hippocampus_comes
ENSRNOG00000002871	Rbm25l1	54	76.718	ENSIPUG00000021051	rbm25b	52	78.072	Ictalurus_punctatus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSSTOG00000011117	RBM25	100	94.313	Ictidomys_tridecemlineatus
ENSRNOG00000002871	Rbm25l1	52	73.256	ENSKMAG00000018826	rbm25b	54	72.109	Kryptolebias_marmoratus
ENSRNOG00000002871	Rbm25l1	55	73.319	ENSKMAG00000016242	rbm25a	59	78.838	Kryptolebias_marmoratus
ENSRNOG00000002871	Rbm25l1	55	87.500	ENSLACG00000011845	RBM25	50	90.148	Latimeria_chalumnae
ENSRNOG00000002871	Rbm25l1	53	84.389	ENSLOCG00000014196	rbm25b	51	84.300	Lepisosteus_oculatus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSMFAG00000040040	RBM25	99	98.966	Macaca_fascicularis
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSMMUG00000002332	RBM25	100	99.365	Macaca_mulatta
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSMNEG00000032922	RBM25	100	91.943	Macaca_nemestrina
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSMLEG00000035157	RBM25	99	98.966	Mandrillus_leucophaeus
ENSRNOG00000002871	Rbm25l1	83	76.296	ENSMAMG00000000165	rbm25a	51	77.582	Mastacembelus_armatus
ENSRNOG00000002871	Rbm25l1	52	78.670	ENSMZEG00005011183	rbm25a	54	78.261	Maylandia_zebra
ENSRNOG00000002871	Rbm25l1	54	72.651	ENSMZEG00005001453	rbm25b	54	72.336	Maylandia_zebra
ENSRNOG00000002871	Rbm25l1	96	94.226	ENSMICG00000034082	RBM25	99	98.966	Microcebus_murinus
ENSRNOG00000002871	Rbm25l1	100	94.411	ENSMOCG00000001935	Rbm25	100	94.411	Microtus_ochrogaster
ENSRNOG00000002871	Rbm25l1	52	78.182	ENSMMOG00000009065	rbm25a	53	77.458	Mola_mola
ENSRNOG00000002871	Rbm25l1	100	96.901	MGP_CAROLIEiJ_G0017921	Rbm25	100	100.000	Mus_caroli
ENSRNOG00000002871	Rbm25l1	100	96.901	ENSMUSG00000010608	Rbm25	100	100.000	Mus_musculus
ENSRNOG00000002871	Rbm25l1	100	96.901	MGP_PahariEiJ_G0029677	Rbm25	100	100.000	Mus_pahari
ENSRNOG00000002871	Rbm25l1	69	95.904	MGP_SPRETEiJ_G0018766	-	100	100.000	Mus_spretus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSMPUG00000003698	RBM25	99	93.234	Mustela_putorius_furo
ENSRNOG00000002871	Rbm25l1	100	96.671	ENSNGAG00000018465	Rbm25	100	96.671	Nannospalax_galili
ENSRNOG00000002871	Rbm25l1	51	74.393	ENSNBRG00000003761	rbm25a	54	67.265	Neolamprologus_brichardi
ENSRNOG00000002871	Rbm25l1	50	98.768	ENSNLEG00000002701	RBM25	99	98.966	Nomascus_leucogenys
ENSRNOG00000002871	Rbm25l1	100	93.483	ENSOANG00000001056	RBM25	98	91.469	Ornithorhynchus_anatinus
ENSRNOG00000002871	Rbm25l1	100	85.867	ENSOCUG00000013737	RBM25	100	94.194	Oryctolagus_cuniculus
ENSRNOG00000002871	Rbm25l1	52	74.828	ENSORLG00020016422	rbm25b	51	74.818	Oryzias_latipes_hni
ENSRNOG00000002871	Rbm25l1	54	71.042	ENSORLG00015011269	rbm25b	54	69.091	Oryzias_latipes_hsok
ENSRNOG00000002871	Rbm25l1	50	99.012	ENSOGAG00000014986	RBM25	100	93.533	Otolemur_garnettii
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSOARG00000000319	RBM25	100	94.313	Ovis_aries
ENSRNOG00000002871	Rbm25l1	50	98.768	ENSPPAG00000039402	RBM25	99	98.966	Pan_paniscus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSPPRG00000017374	RBM25	99	98.966	Panthera_pardus
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSPTIG00000017309	RBM25	99	98.966	Panthera_tigris_altaica
ENSRNOG00000002871	Rbm25l1	50	98.768	ENSPTRG00000006509	RBM25	99	98.966	Pan_troglodytes
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSPANG00000018212	RBM25	99	98.966	Papio_anubis
ENSRNOG00000002871	Rbm25l1	100	93.817	ENSPSIG00000006058	RBM25	100	92.152	Pelodiscus_sinensis
ENSRNOG00000002871	Rbm25l1	50	90.394	ENSPCIG00000011166	RBM25	50	90.864	Phascolarctos_cinereus
ENSRNOG00000002871	Rbm25l1	54	76.872	ENSPLAG00000018338	rbm25a	60	80.165	Poecilia_latipinna
ENSRNOG00000002871	Rbm25l1	54	76.872	ENSPMEG00000024470	rbm25a	60	80.165	Poecilia_mexicana
ENSRNOG00000002871	Rbm25l1	51	79.206	ENSPREG00000009228	rbm25a	60	80.165	Poecilia_reticulata
ENSRNOG00000002871	Rbm25l1	79	99.177	ENSPCAG00000006226	RBM25	77	99.177	Procavia_capensis
ENSRNOG00000002871	Rbm25l1	50	98.768	ENSPCOG00000023107	RBM25	99	98.621	Propithecus_coquereli
ENSRNOG00000002871	Rbm25l1	100	93.128	ENSPVAG00000003931	RBM25	100	91.232	Pteropus_vampyrus
ENSRNOG00000002871	Rbm25l1	52	78.670	ENSPNYG00000022596	rbm25a	51	78.261	Pundamilia_nyererei
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSRBIG00000039904	RBM25	99	98.966	Rhinopithecus_bieti
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSRROG00000035556	RBM25	99	98.966	Rhinopithecus_roxellana
ENSRNOG00000002871	Rbm25l1	52	71.616	ENSSLDG00000024573	rbm25b	96	73.016	Seriola_lalandi_dorsalis
ENSRNOG00000002871	Rbm25l1	50	99.261	ENSSARG00000002327	RBM25	100	94.313	Sorex_araneus
ENSRNOG00000002871	Rbm25l1	56	72.650	ENSTRUG00000017964	rbm25b	52	76.998	Takifugu_rubripes
ENSRNOG00000002871	Rbm25l1	90	66.491	ENSTNIG00000012222	rbm25b	66	77.349	Tetraodon_nigroviridis
ENSRNOG00000002871	Rbm25l1	69	98.990	ENSTBEG00000010538	-	67	98.990	Tupaia_belangeri
ENSRNOG00000002871	Rbm25l1	50	91.626	ENSUAMG00000007707	RBM25	100	99.365	Ursus_americanus
ENSRNOG00000002871	Rbm25l1	79	98.522	ENSVPAG00000009052	RBM25	84	95.885	Vicugna_pacos
ENSRNOG00000002871	Rbm25l1	50	99.015	ENSVVUG00000004426	RBM25	98	94.313	Vulpes_vulpes
ENSRNOG00000002871	Rbm25l1	95	73.638	ENSXETG00000021857	rbm25	53	87.901	Xenopus_tropicalis
ENSRNOG00000002871	Rbm25l1	55	76.840	ENSXCOG00000004043	RBM25	53	77.990	Xiphophorus_couchianus
ENSRNOG00000002871	Rbm25l1	100	71.549	ENSXMAG00000009077	RBM25	51	73.923	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0006397	mRNA processing	-	IEA	Process