EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002914 (Gene tree)
Gene ID: 288914
Gene Symbol: Trmt1
Alias: LOC288914|RGD1305992
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 10206 bases
Position: chr19:25803262-25813467
Accession: 1305992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003941	zf-CCCH	PF00642.24	1.9e-06	1	1
ENSRNOP00000003941	TRM	PF02005.16	1e-148	1	1
ENSRNOP00000003941	Met_10	PF02475.16	3.6e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003941	-	2080	XM_006255236	ENSRNOP00000003941	638 (aa)	XP_006255298	A0A140UHW6

Gene Model

Click here to download ENSRNOG00000002914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002914	Trmt1	96	85.854	ENSG00000104907	TRMT1	100	93.194	Homo_sapiens
ENSRNOG00000002914	Trmt1	100	83.619	ENSAMEG00000012598	TRMT1	95	83.619	Ailuropoda_melanoleuca
ENSRNOG00000002914	Trmt1	91	58.048	ENSACIG00000018680	trmt1	90	58.048	Amphilophus_citrinellus
ENSRNOG00000002914	Trmt1	91	64.846	ENSAOCG00000006781	trmt1	87	64.846	Amphiprion_ocellaris
ENSRNOG00000002914	Trmt1	91	65.017	ENSAPEG00000007712	trmt1	87	65.017	Amphiprion_percula
ENSRNOG00000002914	Trmt1	89	67.311	ENSATEG00000001872	trmt1	84	67.311	Anabas_testudineus
ENSRNOG00000002914	Trmt1	94	66.225	ENSACAG00000003825	TRMT1	95	66.225	Anolis_carolinensis
ENSRNOG00000002914	Trmt1	97	82.372	ENSANAG00000023016	TRMT1	98	83.961	Aotus_nancymaae
ENSRNOG00000002914	Trmt1	89	64.727	ENSACLG00000010073	trmt1	92	64.613	Astatotilapia_calliptera
ENSRNOG00000002914	Trmt1	91	67.065	ENSAMXG00000012026	trmt1	87	67.065	Astyanax_mexicanus
ENSRNOG00000002914	Trmt1	99	83.570	ENSBTAG00000019325	TRMT1	90	83.570	Bos_taurus
ENSRNOG00000002914	Trmt1	82	41.243	WBGene00006613	trm-1	95	41.243	Caenorhabditis_elegans
ENSRNOG00000002914	Trmt1	97	80.960	ENSCJAG00000004566	TRMT1	96	80.960	Callithrix_jacchus
ENSRNOG00000002914	Trmt1	100	83.775	ENSCAFG00000017070	TRMT1	100	83.775	Canis_familiaris
ENSRNOG00000002914	Trmt1	98	83.280	ENSCAFG00020005397	TRMT1	96	82.268	Canis_lupus_dingo
ENSRNOG00000002914	Trmt1	100	82.555	ENSCHIG00000013569	TRMT1	96	82.555	Capra_hircus
ENSRNOG00000002914	Trmt1	97	78.880	ENSTSYG00000003207	TRMT1	97	77.760	Carlito_syrichta
ENSRNOG00000002914	Trmt1	87	79.391	ENSCAPG00000003355	TRMT1	98	79.391	Cavia_aperea
ENSRNOG00000002914	Trmt1	97	81.410	ENSCPOG00000011754	TRMT1	94	81.410	Cavia_porcellus
ENSRNOG00000002914	Trmt1	95	82.295	ENSCCAG00000022263	TRMT1	98	82.295	Cebus_capucinus
ENSRNOG00000002914	Trmt1	85	71.036	ENSCATG00000038220	-	97	71.036	Cercocebus_atys
ENSRNOG00000002914	Trmt1	99	84.202	ENSCATG00000039850	TRMT1	95	84.202	Cercocebus_atys
ENSRNOG00000002914	Trmt1	95	84.565	ENSCLAG00000015295	TRMT1	95	81.311	Chinchilla_lanigera
ENSRNOG00000002914	Trmt1	77	86.519	ENSCSAG00000006500	TRMT1	94	86.519	Chlorocebus_sabaeus
ENSRNOG00000002914	Trmt1	92	68.878	ENSCPBG00000023866	TRMT1	88	69.205	Chrysemys_picta_bellii
ENSRNOG00000002914	Trmt1	87	46.085	ENSCING00000002884	-	99	46.085	Ciona_intestinalis
ENSRNOG00000002914	Trmt1	85	46.995	ENSCSAVG00000010927	-	99	47.388	Ciona_savignyi
ENSRNOG00000002914	Trmt1	95	66.502	ENSCANG00000031650	-	96	65.600	Colobus_angolensis_palliatus
ENSRNOG00000002914	Trmt1	99	67.666	ENSCANG00000040631	TRMT1	96	67.666	Colobus_angolensis_palliatus
ENSRNOG00000002914	Trmt1	99	89.202	ENSCGRG00001022594	Trmt1	98	89.202	Cricetulus_griseus_chok1gshd
ENSRNOG00000002914	Trmt1	99	89.202	ENSCGRG00000017732	Trmt1	96	89.202	Cricetulus_griseus_crigri
ENSRNOG00000002914	Trmt1	89	65.608	ENSCSEG00000001643	trmt1	83	67.191	Cynoglossus_semilaevis
ENSRNOG00000002914	Trmt1	89	66.843	ENSCVAG00000011886	trmt1	85	66.843	Cyprinodon_variegatus
ENSRNOG00000002914	Trmt1	94	63.844	ENSDARG00000010978	trmt1	89	63.934	Danio_rerio
ENSRNOG00000002914	Trmt1	87	57.979	ENSDNOG00000048240	-	95	57.801	Dasypus_novemcinctus
ENSRNOG00000002914	Trmt1	99	81.388	ENSDORG00000014298	Trmt1	96	81.388	Dipodomys_ordii
ENSRNOG00000002914	Trmt1	78	49.801	FBgn0032430	CG6388	85	49.801	Drosophila_melanogaster
ENSRNOG00000002914	Trmt1	53	78.358	ENSETEG00000015483	-	51	78.358	Echinops_telfairi
ENSRNOG00000002914	Trmt1	82	53.551	ENSEBUG00000003449	trmt1	77	53.208	Eptatretus_burgeri
ENSRNOG00000002914	Trmt1	97	82.419	ENSEASG00005004050	TRMT1	100	80.967	Equus_asinus_asinus
ENSRNOG00000002914	Trmt1	97	82.742	ENSECAG00000016149	TRMT1	100	81.279	Equus_caballus
ENSRNOG00000002914	Trmt1	62	70.277	ENSEEUG00000014102	-	100	70.277	Erinaceus_europaeus
ENSRNOG00000002914	Trmt1	89	64.471	ENSELUG00000021659	trmt1	85	64.471	Esox_lucius
ENSRNOG00000002914	Trmt1	100	83.463	ENSFCAG00000000483	TRMT1	97	83.463	Felis_catus
ENSRNOG00000002914	Trmt1	99	79.907	ENSFDAG00000007386	TRMT1	96	79.907	Fukomys_damarensis
ENSRNOG00000002914	Trmt1	87	65.412	ENSFHEG00000012865	trmt1	85	69.201	Fundulus_heteroclitus
ENSRNOG00000002914	Trmt1	89	60.175	ENSGMOG00000006564	trmt1	98	60.175	Gadus_morhua
ENSRNOG00000002914	Trmt1	92	65.882	ENSGAFG00000011862	trmt1	92	65.882	Gambusia_affinis
ENSRNOG00000002914	Trmt1	94	61.488	ENSGACG00000000227	trmt1	96	61.488	Gasterosteus_aculeatus
ENSRNOG00000002914	Trmt1	93	67.833	ENSGAGG00000016432	TRMT1	88	67.833	Gopherus_agassizii
ENSRNOG00000002914	Trmt1	96	86.179	ENSGGOG00000014007	TRMT1	95	84.834	Gorilla_gorilla
ENSRNOG00000002914	Trmt1	87	58.198	ENSHBUG00000008821	trmt1	92	58.198	Haplochromis_burtoni
ENSRNOG00000002914	Trmt1	98	81.629	ENSHGLG00000015972	TRMT1	95	81.629	Heterocephalus_glaber_female
ENSRNOG00000002914	Trmt1	98	76.077	ENSHGLG00100018112	TRMT1	95	76.077	Heterocephalus_glaber_male
ENSRNOG00000002914	Trmt1	91	63.203	ENSHCOG00000009447	trmt1	90	63.203	Hippocampus_comes
ENSRNOG00000002914	Trmt1	89	64.544	ENSIPUG00000002899	trmt1	84	65.060	Ictalurus_punctatus
ENSRNOG00000002914	Trmt1	100	84.317	ENSSTOG00000012531	TRMT1	98	84.317	Ictidomys_tridecemlineatus
ENSRNOG00000002914	Trmt1	92	85.110	ENSJJAG00000017154	Trmt1	95	82.063	Jaculus_jaculus
ENSRNOG00000002914	Trmt1	93	65.268	ENSKMAG00000011809	trmt1	98	64.856	Kryptolebias_marmoratus
ENSRNOG00000002914	Trmt1	89	66.549	ENSLBEG00000012703	trmt1	83	66.373	Labrus_bergylta
ENSRNOG00000002914	Trmt1	89	58.494	ENSLACG00000014585	TRMT1	93	58.494	Latimeria_chalumnae
ENSRNOG00000002914	Trmt1	89	61.207	ENSLOCG00000006479	trmt1	97	61.979	Lepisosteus_oculatus
ENSRNOG00000002914	Trmt1	98	83.706	ENSLAFG00000014072	TRMT1	96	83.706	Loxodonta_africana
ENSRNOG00000002914	Trmt1	99	84.360	ENSMFAG00000033143	TRMT1	95	84.360	Macaca_fascicularis
ENSRNOG00000002914	Trmt1	99	77.165	ENSMMUG00000001167	TRMT1	96	77.165	Macaca_mulatta
ENSRNOG00000002914	Trmt1	99	84.360	ENSMNEG00000037867	TRMT1	95	84.360	Macaca_nemestrina
ENSRNOG00000002914	Trmt1	99	84.202	ENSMLEG00000016142	TRMT1	95	84.202	Mandrillus_leucophaeus
ENSRNOG00000002914	Trmt1	92	65.430	ENSMAMG00000004357	trmt1	88	65.430	Mastacembelus_armatus
ENSRNOG00000002914	Trmt1	89	65.141	ENSMZEG00005014510	trmt1	85	65.141	Maylandia_zebra
ENSRNOG00000002914	Trmt1	98	89.600	ENSMAUG00000011134	Trmt1	96	89.062	Mesocricetus_auratus
ENSRNOG00000002914	Trmt1	99	84.219	ENSMICG00000000793	TRMT1	96	84.219	Microcebus_murinus
ENSRNOG00000002914	Trmt1	98	89.760	ENSMOCG00000015895	Trmt1	96	89.219	Microtus_ochrogaster
ENSRNOG00000002914	Trmt1	93	63.366	ENSMMOG00000011097	trmt1	97	63.366	Mola_mola
ENSRNOG00000002914	Trmt1	95	76.073	ENSMODG00000011619	TRMT1	98	76.073	Monodelphis_domestica
ENSRNOG00000002914	Trmt1	100	95.611	MGP_CAROLIEiJ_G0031304	Trmt1	100	95.769	Mus_caroli
ENSRNOG00000002914	Trmt1	100	95.455	ENSMUSG00000001909	Trmt1	100	95.385	Mus_musculus
ENSRNOG00000002914	Trmt1	100	95.455	MGP_SPRETEiJ_G0032422	Trmt1	100	95.385	Mus_spretus
ENSRNOG00000002914	Trmt1	100	84.087	ENSMPUG00000004210	TRMT1	91	84.087	Mustela_putorius_furo
ENSRNOG00000002914	Trmt1	100	82.839	ENSMLUG00000012809	TRMT1	95	82.839	Myotis_lucifugus
ENSRNOG00000002914	Trmt1	98	85.238	ENSNGAG00000022486	Trmt1	95	85.238	Nannospalax_galili
ENSRNOG00000002914	Trmt1	77	68.657	ENSNBRG00000024376	trmt1	84	68.657	Neolamprologus_brichardi
ENSRNOG00000002914	Trmt1	77	83.387	ENSNLEG00000013019	-	94	83.387	Nomascus_leucogenys
ENSRNOG00000002914	Trmt1	93	74.707	ENSMEUG00000013756	TRMT1	100	74.707	Notamacropus_eugenii
ENSRNOG00000002914	Trmt1	77	86.493	ENSOPRG00000009471	-	75	86.493	Ochotona_princeps
ENSRNOG00000002914	Trmt1	99	81.546	ENSODEG00000010323	TRMT1	96	81.546	Octodon_degus
ENSRNOG00000002914	Trmt1	93	64.874	ENSONIG00000000400	trmt1	95	64.874	Oreochromis_niloticus
ENSRNOG00000002914	Trmt1	79	85.545	ENSOCUG00000021934	TRMT1	95	85.545	Oryctolagus_cuniculus
ENSRNOG00000002914	Trmt1	89	62.807	ENSORLG00000020074	trmt1	89	62.738	Oryzias_latipes
ENSRNOG00000002914	Trmt1	89	65.845	ENSORLG00020007561	trmt1	89	65.669	Oryzias_latipes_hni
ENSRNOG00000002914	Trmt1	89	66.197	ENSORLG00015006547	trmt1	86	66.197	Oryzias_latipes_hsok
ENSRNOG00000002914	Trmt1	93	63.350	ENSOMEG00000019343	trmt1	91	63.350	Oryzias_melastigma
ENSRNOG00000002914	Trmt1	96	82.742	ENSOGAG00000025576	TRMT1	97	82.742	Otolemur_garnettii
ENSRNOG00000002914	Trmt1	100	67.442	ENSOARG00000009397	TRMT1	90	67.752	Ovis_aries
ENSRNOG00000002914	Trmt1	100	75.663	ENSPPRG00000012117	TRMT1	98	75.663	Panthera_pardus
ENSRNOG00000002914	Trmt1	78	85.759	ENSPTIG00000008833	TRMT1	94	85.759	Panthera_tigris_altaica
ENSRNOG00000002914	Trmt1	96	85.854	ENSPTRG00000010557	TRMT1	95	84.518	Pan_troglodytes
ENSRNOG00000002914	Trmt1	99	64.771	ENSPTRG00000050421	-	96	64.771	Pan_troglodytes
ENSRNOG00000002914	Trmt1	96	60.680	ENSPANG00000034058	-	95	60.680	Papio_anubis
ENSRNOG00000002914	Trmt1	99	84.360	ENSPANG00000009247	TRMT1	95	84.360	Papio_anubis
ENSRNOG00000002914	Trmt1	90	66.724	ENSPKIG00000005309	trmt1	85	66.724	Paramormyrops_kingsleyae
ENSRNOG00000002914	Trmt1	92	59.898	ENSPSIG00000008762	TRMT1	90	57.978	Pelodiscus_sinensis
ENSRNOG00000002914	Trmt1	89	65.088	ENSPMGG00000019764	trmt1	90	65.088	Periophthalmus_magnuspinnatus
ENSRNOG00000002914	Trmt1	98	91.360	ENSPEMG00000016247	Trmt1	96	90.781	Peromyscus_maniculatus_bairdii
ENSRNOG00000002914	Trmt1	89	60.563	ENSPMAG00000004329	trmt1	89	60.563	Petromyzon_marinus
ENSRNOG00000002914	Trmt1	93	76.678	ENSPCIG00000019273	TRMT1	92	76.678	Phascolarctos_cinereus
ENSRNOG00000002914	Trmt1	92	66.555	ENSPFOG00000008527	trmt1	91	66.555	Poecilia_formosa
ENSRNOG00000002914	Trmt1	92	66.218	ENSPLAG00000018788	trmt1	92	67.706	Poecilia_latipinna
ENSRNOG00000002914	Trmt1	92	66.387	ENSPMEG00000013120	trmt1	91	66.387	Poecilia_mexicana
ENSRNOG00000002914	Trmt1	90	66.494	ENSPREG00000000211	trmt1	87	65.870	Poecilia_reticulata
ENSRNOG00000002914	Trmt1	96	85.691	ENSPPYG00000009622	TRMT1	95	84.360	Pongo_abelii
ENSRNOG00000002914	Trmt1	98	76.592	ENSPCAG00000003698	TRMT1	96	76.592	Procavia_capensis
ENSRNOG00000002914	Trmt1	99	83.906	ENSPCOG00000008653	TRMT1	97	83.906	Propithecus_coquereli
ENSRNOG00000002914	Trmt1	99	82.862	ENSPVAG00000015076	TRMT1	96	82.862	Pteropus_vampyrus
ENSRNOG00000002914	Trmt1	89	63.139	ENSPNYG00000013960	trmt1	91	63.139	Pundamilia_nyererei
ENSRNOG00000002914	Trmt1	87	68.191	ENSPNAG00000024859	trmt1	92	68.191	Pygocentrus_nattereri
ENSRNOG00000002914	Trmt1	99	83.886	ENSRBIG00000038324	TRMT1	95	83.886	Rhinopithecus_bieti
ENSRNOG00000002914	Trmt1	95	67.928	ENSRBIG00000037505	-	97	66.986	Rhinopithecus_bieti
ENSRNOG00000002914	Trmt1	99	84.044	ENSRROG00000028599	TRMT1	95	84.044	Rhinopithecus_roxellana
ENSRNOG00000002914	Trmt1	95	67.270	ENSRROG00000031847	-	96	66.348	Rhinopithecus_roxellana
ENSRNOG00000002914	Trmt1	79	36.466	YDR120C	-	92	37.030	Saccharomyces_cerevisiae
ENSRNOG00000002914	Trmt1	95	82.787	ENSSBOG00000028861	TRMT1	98	82.787	Saimiri_boliviensis_boliviensis
ENSRNOG00000002914	Trmt1	92	77.265	ENSSHAG00000014381	TRMT1	98	75.908	Sarcophilus_harrisii
ENSRNOG00000002914	Trmt1	89	66.899	ENSSFOG00015004139	trmt1	83	66.899	Scleropages_formosus
ENSRNOG00000002914	Trmt1	89	66.259	ENSSMAG00000021136	trmt1	85	66.259	Scophthalmus_maximus
ENSRNOG00000002914	Trmt1	89	66.667	ENSSDUG00000012740	trmt1	83	66.667	Seriola_dumerili
ENSRNOG00000002914	Trmt1	89	66.314	ENSSLDG00000005971	trmt1	83	66.314	Seriola_lalandi_dorsalis
ENSRNOG00000002914	Trmt1	85	82.784	ENSSARG00000005138	TRMT1	96	82.784	Sorex_araneus
ENSRNOG00000002914	Trmt1	92	53.626	ENSSPUG00000001084	TRMT1	93	53.963	Sphenodon_punctatus
ENSRNOG00000002914	Trmt1	93	62.752	ENSSPAG00000007153	trmt1	98	62.752	Stegastes_partitus
ENSRNOG00000002914	Trmt1	99	85.127	ENSSSCG00000013744	TRMT1	99	85.127	Sus_scrofa
ENSRNOG00000002914	Trmt1	90	61.525	ENSTRUG00000010700	trmt1	88	61.695	Takifugu_rubripes
ENSRNOG00000002914	Trmt1	92	64.334	ENSTNIG00000018808	trmt1	99	64.334	Tetraodon_nigroviridis
ENSRNOG00000002914	Trmt1	100	81.123	ENSTTRG00000006379	TRMT1	97	81.123	Tursiops_truncatus
ENSRNOG00000002914	Trmt1	100	83.931	ENSUAMG00000022911	TRMT1	100	82.371	Ursus_americanus
ENSRNOG00000002914	Trmt1	100	83.619	ENSUMAG00000006027	TRMT1	100	83.619	Ursus_maritimus
ENSRNOG00000002914	Trmt1	100	83.619	ENSVVUG00000024177	TRMT1	96	83.619	Vulpes_vulpes
ENSRNOG00000002914	Trmt1	74	69.198	ENSXETG00000033863	TRMT1	94	69.198	Xenopus_tropicalis
ENSRNOG00000002914	Trmt1	89	67.606	ENSXCOG00000015733	trmt1	87	67.725	Xiphophorus_couchianus
ENSRNOG00000002914	Trmt1	89	67.430	ENSXMAG00000013823	trmt1	97	67.430	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0002940	tRNA N2-guanine methylation	21873635.	IBA	Process
GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	21873635.	IBA	Function
GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function