EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002943 (Gene tree)
Gene ID: 287356
Gene Symbol: Mrpl55
Alias: LOC287356
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 3149 bases
Position: chr10:45552795-45555943
Accession: 1308161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003931	Mitoc_L55	PF09776.9	1.3e-58	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003931	-	945	XM_006246446	ENSRNOP00000003931	127 (aa)	XP_006246508	D3ZF99

Gene Model

Click here to download ENSRNOG00000002943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002943	Mrpl55	98	74.400	ENSG00000162910	MRPL55	96	79.452	Homo_sapiens
ENSRNOG00000002943	Mrpl55	94	72.500	ENSAMEG00000016292	MRPL55	95	72.500	Ailuropoda_melanoleuca
ENSRNOG00000002943	Mrpl55	98	72.000	ENSANAG00000036592	MRPL55	98	72.000	Aotus_nancymaae
ENSRNOG00000002943	Mrpl55	95	72.131	ENSBTAG00000020721	MRPL55	86	72.131	Bos_taurus
ENSRNOG00000002943	Mrpl55	98	72.800	ENSCJAG00000016730	MRPL55	98	72.800	Callithrix_jacchus
ENSRNOG00000002943	Mrpl55	95	72.727	ENSCAFG00000001176	MRPL55	96	72.727	Canis_familiaris
ENSRNOG00000002943	Mrpl55	95	72.727	ENSCAFG00020005742	MRPL55	96	72.727	Canis_lupus_dingo
ENSRNOG00000002943	Mrpl55	95	72.131	ENSCHIG00000024153	MRPL55	96	73.770	Capra_hircus
ENSRNOG00000002943	Mrpl55	98	72.000	ENSTSYG00000002932	MRPL55	98	72.000	Carlito_syrichta
ENSRNOG00000002943	Mrpl55	98	70.968	ENSCAPG00000005899	MRPL55	100	70.968	Cavia_aperea
ENSRNOG00000002943	Mrpl55	98	74.194	ENSCPOG00000014241	MRPL55	97	74.194	Cavia_porcellus
ENSRNOG00000002943	Mrpl55	98	72.800	ENSCCAG00000031724	MRPL55	98	72.800	Cebus_capucinus
ENSRNOG00000002943	Mrpl55	98	73.600	ENSCATG00000001114	MRPL55	98	73.600	Cercocebus_atys
ENSRNOG00000002943	Mrpl55	98	76.000	ENSCLAG00000000917	MRPL55	98	76.000	Chinchilla_lanigera
ENSRNOG00000002943	Mrpl55	98	73.600	ENSCSAG00000016477	MRPL55	98	73.600	Chlorocebus_sabaeus
ENSRNOG00000002943	Mrpl55	98	73.600	ENSCANG00000034934	MRPL55	98	73.600	Colobus_angolensis_palliatus
ENSRNOG00000002943	Mrpl55	100	90.551	ENSCGRG00001020506	Mrpl55	100	90.551	Cricetulus_griseus_chok1gshd
ENSRNOG00000002943	Mrpl55	100	88.976	ENSCGRG00000002872	Mrpl55	100	88.976	Cricetulus_griseus_crigri
ENSRNOG00000002943	Mrpl55	96	66.393	ENSDNOG00000024342	MRPL55	97	66.393	Dasypus_novemcinctus
ENSRNOG00000002943	Mrpl55	95	79.339	ENSEASG00005017538	MRPL55	96	79.339	Equus_asinus_asinus
ENSRNOG00000002943	Mrpl55	95	79.339	ENSECAG00000019642	MRPL55	96	79.339	Equus_caballus
ENSRNOG00000002943	Mrpl55	96	73.770	ENSFCAG00000015199	MRPL55	97	73.770	Felis_catus
ENSRNOG00000002943	Mrpl55	98	74.400	ENSFDAG00000006749	MRPL55	98	74.400	Fukomys_damarensis
ENSRNOG00000002943	Mrpl55	98	72.800	ENSGGOG00000015709	MRPL55	98	72.800	Gorilla_gorilla
ENSRNOG00000002943	Mrpl55	98	75.806	ENSHGLG00000000165	MRPL55	97	75.806	Heterocephalus_glaber_female
ENSRNOG00000002943	Mrpl55	98	75.806	ENSHGLG00100018781	MRPL55	97	75.806	Heterocephalus_glaber_male
ENSRNOG00000002943	Mrpl55	98	75.806	ENSHGLG00100007233	MRPL55	97	75.806	Heterocephalus_glaber_male
ENSRNOG00000002943	Mrpl55	100	83.465	ENSJJAG00000021164	Mrpl55	100	83.465	Jaculus_jaculus
ENSRNOG00000002943	Mrpl55	94	70.833	ENSLAFG00000003008	-	94	70.833	Loxodonta_africana
ENSRNOG00000002943	Mrpl55	98	72.800	ENSMFAG00000003524	MRPL55	98	72.800	Macaca_fascicularis
ENSRNOG00000002943	Mrpl55	94	71.429	ENSMMUG00000002790	MRPL55	100	63.636	Macaca_mulatta
ENSRNOG00000002943	Mrpl55	98	72.800	ENSMNEG00000036387	MRPL55	98	72.800	Macaca_nemestrina
ENSRNOG00000002943	Mrpl55	98	73.600	ENSMLEG00000043407	MRPL55	98	73.600	Mandrillus_leucophaeus
ENSRNOG00000002943	Mrpl55	100	90.551	ENSMAUG00000000347	Mrpl55	100	90.551	Mesocricetus_auratus
ENSRNOG00000002943	Mrpl55	98	78.400	ENSMICG00000031760	MRPL55	98	78.400	Microcebus_murinus
ENSRNOG00000002943	Mrpl55	100	92.126	ENSMOCG00000022355	Mrpl55	100	92.126	Microtus_ochrogaster
ENSRNOG00000002943	Mrpl55	86	57.798	ENSMODG00000013793	-	95	57.798	Monodelphis_domestica
ENSRNOG00000002943	Mrpl55	100	93.701	MGP_CAROLIEiJ_G0016428	Mrpl55	100	93.701	Mus_caroli
ENSRNOG00000002943	Mrpl55	100	93.701	ENSMUSG00000036860	Mrpl55	100	93.701	Mus_musculus
ENSRNOG00000002943	Mrpl55	100	92.913	MGP_PahariEiJ_G0017559	Mrpl55	100	92.913	Mus_pahari
ENSRNOG00000002943	Mrpl55	100	93.701	MGP_SPRETEiJ_G0017265	Mrpl55	100	93.701	Mus_spretus
ENSRNOG00000002943	Mrpl55	96	72.131	ENSMPUG00000001004	MRPL55	97	72.131	Mustela_putorius_furo
ENSRNOG00000002943	Mrpl55	96	74.590	ENSMLUG00000007037	MRPL55	97	74.590	Myotis_lucifugus
ENSRNOG00000002943	Mrpl55	100	80.469	ENSNGAG00000023889	Mrpl55	100	80.469	Nannospalax_galili
ENSRNOG00000002943	Mrpl55	98	73.600	ENSNLEG00000014215	MRPL55	98	73.600	Nomascus_leucogenys
ENSRNOG00000002943	Mrpl55	91	68.966	ENSOPRG00000015086	-	78	68.966	Ochotona_princeps
ENSRNOG00000002943	Mrpl55	94	73.109	ENSODEG00000001067	MRPL55	100	73.109	Octodon_degus
ENSRNOG00000002943	Mrpl55	96	58.197	ENSOCUG00000027013	-	97	58.197	Oryctolagus_cuniculus
ENSRNOG00000002943	Mrpl55	95	73.554	ENSOCUG00000015380	-	94	73.554	Oryctolagus_cuniculus
ENSRNOG00000002943	Mrpl55	94	74.790	ENSOGAG00000010981	MRPL55	94	74.790	Otolemur_garnettii
ENSRNOG00000002943	Mrpl55	95	72.131	ENSOARG00000006369	MRPL55	96	73.770	Ovis_aries
ENSRNOG00000002943	Mrpl55	98	73.600	ENSPPAG00000030545	MRPL55	98	73.600	Pan_paniscus
ENSRNOG00000002943	Mrpl55	96	74.590	ENSPPRG00000004595	MRPL55	97	74.590	Panthera_pardus
ENSRNOG00000002943	Mrpl55	96	74.590	ENSPTIG00000008780	MRPL55	90	74.590	Panthera_tigris_altaica
ENSRNOG00000002943	Mrpl55	98	72.800	ENSPTRG00000002068	MRPL55	98	72.800	Pan_troglodytes
ENSRNOG00000002943	Mrpl55	98	72.800	ENSPANG00000017717	MRPL55	98	72.800	Papio_anubis
ENSRNOG00000002943	Mrpl55	100	92.913	ENSPEMG00000010381	Mrpl55	100	92.913	Peromyscus_maniculatus_bairdii
ENSRNOG00000002943	Mrpl55	98	74.400	ENSPPYG00000000146	-	98	74.400	Pongo_abelii
ENSRNOG00000002943	Mrpl55	84	78.505	ENSPCAG00000010591	MRPL55	66	78.505	Procavia_capensis
ENSRNOG00000002943	Mrpl55	98	78.400	ENSPCOG00000013827	MRPL55	98	78.400	Propithecus_coquereli
ENSRNOG00000002943	Mrpl55	98	73.600	ENSRBIG00000038180	MRPL55	98	73.600	Rhinopithecus_bieti
ENSRNOG00000002943	Mrpl55	98	73.600	ENSRROG00000033833	MRPL55	98	73.600	Rhinopithecus_roxellana
ENSRNOG00000002943	Mrpl55	98	73.600	ENSSBOG00000035388	MRPL55	98	73.600	Saimiri_boliviensis_boliviensis
ENSRNOG00000002943	Mrpl55	97	52.846	ENSSHAG00000014746	-	98	52.846	Sarcophilus_harrisii
ENSRNOG00000002943	Mrpl55	95	73.770	ENSSSCG00000029050	MRPL55	96	74.590	Sus_scrofa
ENSRNOG00000002943	Mrpl55	96	75.410	ENSUAMG00000016465	-	97	75.410	Ursus_americanus
ENSRNOG00000002943	Mrpl55	73	50.538	ENSUAMG00000022827	-	60	50.538	Ursus_americanus
ENSRNOG00000002943	Mrpl55	96	74.590	ENSUMAG00000000905	MRPL55	97	74.590	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0006412	translation	21873635.	IBA	Process