EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003149 (Gene tree)
Gene ID: 288917
Gene Symbol: Farsa
Alias: LOC288917|pheRS
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 9522 bases
Position: chr19:25969255-25978776
Accession: 1310314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000004370	tRNA-synt_2d	PF01409.20	8.7e-91	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000004370	-	1793	-	ENSRNOP00000004370	508 (aa)	-	Q505J8

Gene Model

Click here to download ENSRNOG00000003149's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003149	Farsa	100	92.520	ENSG00000179115	FARSA	99	94.311	Homo_sapiens
ENSRNOG00000003149	Farsa	98	77.218	ENSAPOG00000011465	farsa	99	77.218	Acanthochromis_polyacanthus
ENSRNOG00000003149	Farsa	99	91.124	ENSAMEG00000012446	FARSA	99	91.124	Ailuropoda_melanoleuca
ENSRNOG00000003149	Farsa	98	72.782	ENSACIG00000020499	farsa	99	72.782	Amphilophus_citrinellus
ENSRNOG00000003149	Farsa	98	76.815	ENSAOCG00000000581	farsa	99	76.815	Amphiprion_ocellaris
ENSRNOG00000003149	Farsa	98	76.613	ENSAPEG00000017695	farsa	99	76.613	Amphiprion_percula
ENSRNOG00000003149	Farsa	98	69.960	ENSATEG00000012807	farsa	99	69.960	Anabas_testudineus
ENSRNOG00000003149	Farsa	98	63.783	ENSATEG00000012633	farsa	99	63.783	Anabas_testudineus
ENSRNOG00000003149	Farsa	96	80.325	ENSACAG00000017166	FARSA	83	80.325	Anolis_carolinensis
ENSRNOG00000003149	Farsa	100	92.323	ENSANAG00000037420	FARSA	100	92.323	Aotus_nancymaae
ENSRNOG00000003149	Farsa	98	77.218	ENSACLG00000001716	farsa	99	77.218	Astatotilapia_calliptera
ENSRNOG00000003149	Farsa	98	78.629	ENSAMXG00000037912	farsa	99	78.629	Astyanax_mexicanus
ENSRNOG00000003149	Farsa	100	91.535	ENSBTAG00000021374	FARSA	100	91.535	Bos_taurus
ENSRNOG00000003149	Farsa	96	59.918	WBGene00001497	fars-1	97	59.918	Caenorhabditis_elegans
ENSRNOG00000003149	Farsa	99	91.124	ENSCJAG00000004686	FARSA	100	86.417	Callithrix_jacchus
ENSRNOG00000003149	Farsa	100	91.732	ENSCAFG00000017096	FARSA	100	91.732	Canis_familiaris
ENSRNOG00000003149	Farsa	100	91.732	ENSCAFG00020005315	FARSA	100	91.732	Canis_lupus_dingo
ENSRNOG00000003149	Farsa	100	85.380	ENSCHIG00000022617	FARSA	100	85.380	Capra_hircus
ENSRNOG00000003149	Farsa	93	86.383	ENSTSYG00000002595	FARSA	85	86.383	Carlito_syrichta
ENSRNOG00000003149	Farsa	91	91.957	ENSCAPG00000011353	FARSA	98	92.157	Cavia_aperea
ENSRNOG00000003149	Farsa	100	92.323	ENSCPOG00000000787	FARSA	100	92.323	Cavia_porcellus
ENSRNOG00000003149	Farsa	100	92.126	ENSCCAG00000028176	FARSA	100	92.126	Cebus_capucinus
ENSRNOG00000003149	Farsa	100	91.535	ENSCLAG00000015489	FARSA	100	91.535	Chinchilla_lanigera
ENSRNOG00000003149	Farsa	94	93.920	ENSCSAG00000006530	FARSA	100	93.920	Chlorocebus_sabaeus
ENSRNOG00000003149	Farsa	94	81.381	ENSCPBG00000023915	FARSA	98	80.242	Chrysemys_picta_bellii
ENSRNOG00000003149	Farsa	94	63.674	ENSCING00000002567	-	96	63.674	Ciona_intestinalis
ENSRNOG00000003149	Farsa	98	62.450	ENSCSAVG00000010683	-	99	62.450	Ciona_savignyi
ENSRNOG00000003149	Farsa	100	92.717	ENSCANG00000043649	-	100	92.717	Colobus_angolensis_palliatus
ENSRNOG00000003149	Farsa	100	95.866	ENSCGRG00001019769	Farsa	100	95.866	Cricetulus_griseus_chok1gshd
ENSRNOG00000003149	Farsa	100	95.866	ENSCGRG00000013415	Farsa	100	95.866	Cricetulus_griseus_crigri
ENSRNOG00000003149	Farsa	98	77.218	ENSCSEG00000016214	farsa	96	77.218	Cynoglossus_semilaevis
ENSRNOG00000003149	Farsa	98	75.806	ENSCVAG00000007907	farsa	99	75.806	Cyprinodon_variegatus
ENSRNOG00000003149	Farsa	98	77.621	ENSDARG00000098825	farsa	99	77.621	Danio_rerio
ENSRNOG00000003149	Farsa	96	91.786	ENSDNOG00000032350	FARSA	99	91.786	Dasypus_novemcinctus
ENSRNOG00000003149	Farsa	100	91.552	ENSDORG00000010118	Farsa	100	91.552	Dipodomys_ordii
ENSRNOG00000003149	Farsa	96	63.211	FBgn0030007	alpha-PheRS	98	63.211	Drosophila_melanogaster
ENSRNOG00000003149	Farsa	100	82.677	ENSETEG00000018673	FARSA	100	82.677	Echinops_telfairi
ENSRNOG00000003149	Farsa	58	68.919	ENSEBUG00000008545	farsa	99	68.919	Eptatretus_burgeri
ENSRNOG00000003149	Farsa	91	81.321	ENSEASG00005004093	FARSA	95	81.321	Equus_asinus_asinus
ENSRNOG00000003149	Farsa	100	92.717	ENSECAG00000015139	FARSA	95	92.717	Equus_caballus
ENSRNOG00000003149	Farsa	98	77.218	ENSELUG00000010183	farsa	99	77.218	Esox_lucius
ENSRNOG00000003149	Farsa	100	91.929	ENSFCAG00000023511	FARSA	100	91.929	Felis_catus
ENSRNOG00000003149	Farsa	99	91.321	ENSFDAG00000005987	FARSA	100	91.321	Fukomys_damarensis
ENSRNOG00000003149	Farsa	98	77.218	ENSFHEG00000009382	farsa	94	77.218	Fundulus_heteroclitus
ENSRNOG00000003149	Farsa	98	75.855	ENSGMOG00000018319	farsa	99	75.855	Gadus_morhua
ENSRNOG00000003149	Farsa	97	74.747	ENSGALG00000040258	FARSA	87	74.747	Gallus_gallus
ENSRNOG00000003149	Farsa	98	77.419	ENSGAFG00000014146	farsa	99	77.419	Gambusia_affinis
ENSRNOG00000003149	Farsa	98	76.660	ENSGACG00000006278	farsa	99	76.660	Gasterosteus_aculeatus
ENSRNOG00000003149	Farsa	97	80.242	ENSGAGG00000000753	FARSA	98	80.242	Gopherus_agassizii
ENSRNOG00000003149	Farsa	99	92.702	ENSGGOG00000003418	FARSA	99	92.702	Gorilla_gorilla
ENSRNOG00000003149	Farsa	98	77.218	ENSHBUG00000019852	farsa	99	77.218	Haplochromis_burtoni
ENSRNOG00000003149	Farsa	99	92.063	ENSHGLG00000005213	FARSA	100	92.063	Heterocephalus_glaber_female
ENSRNOG00000003149	Farsa	99	92.063	ENSHGLG00100009586	FARSA	99	92.063	Heterocephalus_glaber_male
ENSRNOG00000003149	Farsa	98	76.008	ENSHCOG00000019548	farsa	99	76.008	Hippocampus_comes
ENSRNOG00000003149	Farsa	98	78.024	ENSIPUG00000007635	farsa	99	78.024	Ictalurus_punctatus
ENSRNOG00000003149	Farsa	99	91.321	ENSSTOG00000008748	FARSA	100	91.321	Ictidomys_tridecemlineatus
ENSRNOG00000003149	Farsa	98	77.621	ENSKMAG00000010698	farsa	99	77.621	Kryptolebias_marmoratus
ENSRNOG00000003149	Farsa	98	76.815	ENSLBEG00000006757	-	99	76.815	Labrus_bergylta
ENSRNOG00000003149	Farsa	84	73.647	ENSLBEG00000001258	farsa	97	73.647	Labrus_bergylta
ENSRNOG00000003149	Farsa	91	77.970	ENSLOCG00000008389	farsa	96	77.970	Lepisosteus_oculatus
ENSRNOG00000003149	Farsa	100	90.945	ENSLAFG00000016154	FARSA	100	90.945	Loxodonta_africana
ENSRNOG00000003149	Farsa	100	92.913	ENSMFAG00000030595	FARSA	100	92.913	Macaca_fascicularis
ENSRNOG00000003149	Farsa	100	92.913	ENSMMUG00000004390	FARSA	100	92.913	Macaca_mulatta
ENSRNOG00000003149	Farsa	100	92.913	ENSMNEG00000043866	FARSA	100	92.913	Macaca_nemestrina
ENSRNOG00000003149	Farsa	100	92.534	ENSMLEG00000029157	FARSA	100	92.534	Mandrillus_leucophaeus
ENSRNOG00000003149	Farsa	98	77.823	ENSMAMG00000010636	farsa	99	77.823	Mastacembelus_armatus
ENSRNOG00000003149	Farsa	98	77.218	ENSMZEG00005002319	farsa	99	77.218	Maylandia_zebra
ENSRNOG00000003149	Farsa	100	96.850	ENSMAUG00000009188	Farsa	100	96.850	Mesocricetus_auratus
ENSRNOG00000003149	Farsa	100	92.520	ENSMICG00000016272	FARSA	100	92.520	Microcebus_murinus
ENSRNOG00000003149	Farsa	100	96.654	ENSMOCG00000011399	Farsa	100	96.654	Microtus_ochrogaster
ENSRNOG00000003149	Farsa	98	73.387	ENSMMOG00000006287	farsa	99	73.387	Mola_mola
ENSRNOG00000003149	Farsa	98	85.484	ENSMODG00000011519	FARSA	100	85.484	Monodelphis_domestica
ENSRNOG00000003149	Farsa	98	73.790	ENSMALG00000001972	farsa	99	73.790	Monopterus_albus
ENSRNOG00000003149	Farsa	100	98.425	MGP_CAROLIEiJ_G0031312	Farsa	100	98.425	Mus_caroli
ENSRNOG00000003149	Farsa	100	98.622	ENSMUSG00000003808	Farsa	100	98.622	Mus_musculus
ENSRNOG00000003149	Farsa	100	98.228	MGP_PahariEiJ_G0022917	Farsa	100	98.228	Mus_pahari
ENSRNOG00000003149	Farsa	100	98.819	MGP_SPRETEiJ_G0032431	Farsa	100	98.819	Mus_spretus
ENSRNOG00000003149	Farsa	100	91.339	ENSMPUG00000004400	FARSA	100	91.339	Mustela_putorius_furo
ENSRNOG00000003149	Farsa	99	90.909	ENSMLUG00000012767	FARSA	99	90.909	Myotis_lucifugus
ENSRNOG00000003149	Farsa	73	95.664	ENSNGAG00000018353	Farsa	100	95.664	Nannospalax_galili
ENSRNOG00000003149	Farsa	98	77.621	ENSNBRG00000010063	farsa	99	77.621	Neolamprologus_brichardi
ENSRNOG00000003149	Farsa	100	91.732	ENSNLEG00000012899	FARSA	100	91.732	Nomascus_leucogenys
ENSRNOG00000003149	Farsa	98	84.677	ENSMEUG00000014253	FARSA	99	84.677	Notamacropus_eugenii
ENSRNOG00000003149	Farsa	100	91.142	ENSOPRG00000005004	FARSA	100	91.142	Ochotona_princeps
ENSRNOG00000003149	Farsa	100	91.732	ENSODEG00000010433	FARSA	100	91.732	Octodon_degus
ENSRNOG00000003149	Farsa	98	78.024	ENSONIG00000008075	farsa	99	78.024	Oreochromis_niloticus
ENSRNOG00000003149	Farsa	98	76.411	ENSORLG00000016406	farsa	90	76.411	Oryzias_latipes
ENSRNOG00000003149	Farsa	98	76.613	ENSORLG00020021978	farsa	99	76.613	Oryzias_latipes_hni
ENSRNOG00000003149	Farsa	98	76.613	ENSORLG00015015045	farsa	99	77.002	Oryzias_latipes_hsok
ENSRNOG00000003149	Farsa	98	76.411	ENSOMEG00000017367	farsa	97	76.411	Oryzias_melastigma
ENSRNOG00000003149	Farsa	100	92.126	ENSOGAG00000012243	FARSA	100	92.126	Otolemur_garnettii
ENSRNOG00000003149	Farsa	100	91.732	ENSOARG00000009991	FARSA	94	91.732	Ovis_aries
ENSRNOG00000003149	Farsa	100	92.717	ENSPPAG00000034266	FARSA	100	92.717	Pan_paniscus
ENSRNOG00000003149	Farsa	100	91.929	ENSPPRG00000000346	FARSA	100	91.929	Panthera_pardus
ENSRNOG00000003149	Farsa	93	92.766	ENSPTIG00000011502	FARSA	97	92.766	Panthera_tigris_altaica
ENSRNOG00000003149	Farsa	100	92.717	ENSPTRG00000010550	FARSA	100	92.717	Pan_troglodytes
ENSRNOG00000003149	Farsa	100	92.717	ENSPANG00000010978	FARSA	100	87.598	Papio_anubis
ENSRNOG00000003149	Farsa	98	75.605	ENSPKIG00000007170	farsa	99	77.016	Paramormyrops_kingsleyae
ENSRNOG00000003149	Farsa	88	75.893	ENSPSIG00000012701	FARSA	99	74.836	Pelodiscus_sinensis
ENSRNOG00000003149	Farsa	98	71.774	ENSPMGG00000001401	farsa	99	71.774	Periophthalmus_magnuspinnatus
ENSRNOG00000003149	Farsa	100	96.063	ENSPEMG00000012560	Farsa	100	96.063	Peromyscus_maniculatus_bairdii
ENSRNOG00000003149	Farsa	98	75.202	ENSPMAG00000008453	farsa	99	75.202	Petromyzon_marinus
ENSRNOG00000003149	Farsa	98	85.887	ENSPCIG00000019294	FARSA	99	85.887	Phascolarctos_cinereus
ENSRNOG00000003149	Farsa	98	77.419	ENSPFOG00000001201	farsa	99	77.419	Poecilia_formosa
ENSRNOG00000003149	Farsa	98	77.419	ENSPLAG00000018191	farsa	99	77.419	Poecilia_latipinna
ENSRNOG00000003149	Farsa	98	77.621	ENSPMEG00000013547	farsa	99	77.621	Poecilia_mexicana
ENSRNOG00000003149	Farsa	98	72.782	ENSPREG00000013620	farsa	99	72.782	Poecilia_reticulata
ENSRNOG00000003149	Farsa	100	92.913	ENSPPYG00000009615	FARSA	100	92.913	Pongo_abelii
ENSRNOG00000003149	Farsa	100	91.535	ENSPCAG00000015721	FARSA	100	91.535	Procavia_capensis
ENSRNOG00000003149	Farsa	100	92.520	ENSPCOG00000014412	FARSA	100	92.520	Propithecus_coquereli
ENSRNOG00000003149	Farsa	86	94.222	ENSPVAG00000014714	FARSA	86	94.222	Pteropus_vampyrus
ENSRNOG00000003149	Farsa	98	77.218	ENSPNYG00000002144	farsa	99	77.218	Pundamilia_nyererei
ENSRNOG00000003149	Farsa	98	78.831	ENSPNAG00000000869	farsa	99	78.831	Pygocentrus_nattereri
ENSRNOG00000003149	Farsa	100	92.520	ENSRBIG00000025585	FARSA	100	92.520	Rhinopithecus_bieti
ENSRNOG00000003149	Farsa	100	92.520	ENSRROG00000040046	FARSA	100	87.402	Rhinopithecus_roxellana
ENSRNOG00000003149	Farsa	91	50.424	YFL022C	FRS2	93	50.424	Saccharomyces_cerevisiae
ENSRNOG00000003149	Farsa	100	92.323	ENSSBOG00000031362	FARSA	100	92.323	Saimiri_boliviensis_boliviensis
ENSRNOG00000003149	Farsa	88	85.906	ENSSHAG00000015006	FARSA	100	85.906	Sarcophilus_harrisii
ENSRNOG00000003149	Farsa	98	75.605	ENSSFOG00015014864	farsa	99	75.605	Scleropages_formosus
ENSRNOG00000003149	Farsa	98	76.815	ENSSMAG00000002358	farsa	99	76.815	Scophthalmus_maximus
ENSRNOG00000003149	Farsa	98	76.008	ENSSDUG00000008631	farsa	99	76.008	Seriola_dumerili
ENSRNOG00000003149	Farsa	98	76.008	ENSSLDG00000017108	farsa	99	76.008	Seriola_lalandi_dorsalis
ENSRNOG00000003149	Farsa	66	96.970	ENSSARG00000006579	-	70	88.997	Sorex_araneus
ENSRNOG00000003149	Farsa	88	66.593	ENSSPUG00000012509	FARSA	99	65.953	Sphenodon_punctatus
ENSRNOG00000003149	Farsa	98	77.016	ENSSPAG00000018292	farsa	92	77.016	Stegastes_partitus
ENSRNOG00000003149	Farsa	100	91.339	ENSSSCG00000013745	FARSA	100	91.339	Sus_scrofa
ENSRNOG00000003149	Farsa	98	66.532	ENSTRUG00000010624	farsa	99	66.532	Takifugu_rubripes
ENSRNOG00000003149	Farsa	98	71.169	ENSTNIG00000008330	farsa	99	71.169	Tetraodon_nigroviridis
ENSRNOG00000003149	Farsa	90	88.235	ENSTBEG00000000396	FARSA	100	88.235	Tupaia_belangeri
ENSRNOG00000003149	Farsa	87	90.201	ENSTTRG00000003599	FARSA	87	90.201	Tursiops_truncatus
ENSRNOG00000003149	Farsa	99	91.124	ENSUAMG00000010230	FARSA	99	91.124	Ursus_americanus
ENSRNOG00000003149	Farsa	99	90.927	ENSUMAG00000006110	FARSA	99	90.927	Ursus_maritimus
ENSRNOG00000003149	Farsa	100	91.732	ENSVVUG00000024145	FARSA	100	91.732	Vulpes_vulpes
ENSRNOG00000003149	Farsa	98	76.353	ENSXETG00000007936	farsa	99	76.353	Xenopus_tropicalis
ENSRNOG00000003149	Farsa	98	69.014	ENSXCOG00000015512	farsa	99	69.014	Xiphophorus_couchianus
ENSRNOG00000003149	Farsa	98	76.210	ENSXMAG00000008832	farsa	99	76.210	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0004826	phenylalanine-tRNA ligase activity	21873635.	IBA	Function
GO:0004826	phenylalanine-tRNA ligase activity	-	ISO	Function
GO:0004826	phenylalanine-tRNA ligase activity	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	3880707.	IDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006432	phenylalanyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	-	ISO	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	-	ISS	Process
GO:0009328	phenylalanine-tRNA ligase complex	21873635.	IBA	Component
GO:0009328	phenylalanine-tRNA ligase complex	-	ISO	Component
GO:0009328	phenylalanine-tRNA ligase complex	-	ISS	Component
GO:0051290	protein heterotetramerization	-	ISO	Process
GO:0051290	protein heterotetramerization	-	ISS	Process