EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003208 (Gene tree)
Gene ID: 317252
Gene Symbol: Ercc6l
Alias: LOC317252|RGD1565734
Full Name: ERCC excision repair 6 like%2C spindle assembly checkpoint helicase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 15727 bases
Position: chrX:72018373-72034099
Accession: 1565734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000004310	ResIII	PF04851.15	5.4e-14	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000004310	-	3959	-	ENSRNOP00000004310	1230 (aa)	-	D4A0G9

Gene Model

Click here to download ENSRNOG00000003208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003208	Ercc6l	99	72.771	ENSG00000186871	ERCC6L	99	72.611	Homo_sapiens
ENSRNOG00000003208	Ercc6l	54	62.481	ENSAPOG00000011392	ercc6l	97	62.481	Acanthochromis_polyacanthus
ENSRNOG00000003208	Ercc6l	99	70.406	ENSAMEG00000005804	ERCC6L	100	70.406	Ailuropoda_melanoleuca
ENSRNOG00000003208	Ercc6l	98	46.123	ENSAOCG00000016323	ercc6l	97	46.556	Amphiprion_ocellaris
ENSRNOG00000003208	Ercc6l	62	57.584	ENSAOCG00000016285	-	97	45.919	Amphiprion_ocellaris
ENSRNOG00000003208	Ercc6l	80	59.444	ENSAPEG00000022533	ERCC6L	99	59.444	Amphiprion_percula
ENSRNOG00000003208	Ercc6l	97	45.888	ENSAPEG00000022499	ercc6l	98	45.447	Amphiprion_percula
ENSRNOG00000003208	Ercc6l	75	62.027	ENSATEG00000012969	ercc6l	88	61.757	Anabas_testudineus
ENSRNOG00000003208	Ercc6l	54	65.875	ENSACAG00000029354	-	93	67.023	Anolis_carolinensis
ENSRNOG00000003208	Ercc6l	91	50.042	ENSACAG00000001226	-	95	51.243	Anolis_carolinensis
ENSRNOG00000003208	Ercc6l	53	66.918	ENSACAG00000028866	-	89	68.118	Anolis_carolinensis
ENSRNOG00000003208	Ercc6l	100	71.679	ENSANAG00000022378	ERCC6L	100	71.679	Aotus_nancymaae
ENSRNOG00000003208	Ercc6l	81	60.489	ENSACLG00000006555	ercc6l	85	60.360	Astatotilapia_calliptera
ENSRNOG00000003208	Ercc6l	79	59.806	ENSAMXG00000004780	ercc6l	89	59.806	Astyanax_mexicanus
ENSRNOG00000003208	Ercc6l	99	70.288	ENSBTAG00000005607	ERCC6L	99	70.128	Bos_taurus
ENSRNOG00000003208	Ercc6l	100	71.019	ENSCJAG00000022332	ERCC6L	100	70.780	Callithrix_jacchus
ENSRNOG00000003208	Ercc6l	99	69.316	ENSCAFG00000023690	ERCC6L	98	69.237	Canis_familiaris
ENSRNOG00000003208	Ercc6l	90	68.458	ENSCAFG00020021313	ERCC6L	99	68.370	Canis_lupus_dingo
ENSRNOG00000003208	Ercc6l	99	69.721	ENSCHIG00000009967	ERCC6L	99	69.562	Capra_hircus
ENSRNOG00000003208	Ercc6l	100	71.258	ENSTSYG00000013701	ERCC6L	100	71.258	Carlito_syrichta
ENSRNOG00000003208	Ercc6l	99	69.792	ENSCPOG00000011407	ERCC6L	99	69.792	Cavia_porcellus
ENSRNOG00000003208	Ercc6l	100	71.758	ENSCCAG00000023790	ERCC6L	100	71.599	Cebus_capucinus
ENSRNOG00000003208	Ercc6l	99	72.532	ENSCATG00000038031	ERCC6L	99	72.373	Cercocebus_atys
ENSRNOG00000003208	Ercc6l	99	69.808	ENSCLAG00000015218	-	99	70.128	Chinchilla_lanigera
ENSRNOG00000003208	Ercc6l	99	68.404	ENSCLAG00000017785	-	99	68.324	Chinchilla_lanigera
ENSRNOG00000003208	Ercc6l	98	72.896	ENSCSAG00000011173	ERCC6L	98	72.735	Chlorocebus_sabaeus
ENSRNOG00000003208	Ercc6l	99	52.129	ENSCPBG00000011965	ERCC6L	82	71.984	Chrysemys_picta_bellii
ENSRNOG00000003208	Ercc6l	99	72.054	ENSCANG00000016909	ERCC6L	99	71.895	Colobus_angolensis_palliatus
ENSRNOG00000003208	Ercc6l	99	83.641	ENSCGRG00001016668	Ercc6l	99	83.641	Cricetulus_griseus_chok1gshd
ENSRNOG00000003208	Ercc6l	99	83.641	ENSCGRG00000006223	Ercc6l	99	83.641	Cricetulus_griseus_crigri
ENSRNOG00000003208	Ercc6l	80	63.649	ENSCSEG00000010268	ercc6l	85	64.080	Cynoglossus_semilaevis
ENSRNOG00000003208	Ercc6l	56	60.965	ENSCVAG00000008090	ercc6l	96	60.965	Cyprinodon_variegatus
ENSRNOG00000003208	Ercc6l	66	62.119	ENSDARG00000002479	ercc6l	57	62.483	Danio_rerio
ENSRNOG00000003208	Ercc6l	99	70.382	ENSDNOG00000032356	ERCC6L	99	70.382	Dasypus_novemcinctus
ENSRNOG00000003208	Ercc6l	99	71.888	ENSDORG00000007865	Ercc6l	99	72.061	Dipodomys_ordii
ENSRNOG00000003208	Ercc6l	82	82.633	ENSETEG00000018007	ERCC6L	94	82.633	Echinops_telfairi
ENSRNOG00000003208	Ercc6l	90	71.996	ENSEASG00005007025	ERCC6L	99	71.996	Equus_asinus_asinus
ENSRNOG00000003208	Ercc6l	99	72.430	ENSECAG00000002513	ERCC6L	99	72.430	Equus_caballus
ENSRNOG00000003208	Ercc6l	93	82.496	ENSEEUG00000015724	ERCC6L	93	82.496	Erinaceus_europaeus
ENSRNOG00000003208	Ercc6l	81	64.674	ENSELUG00000007917	ercc6l	99	46.340	Esox_lucius
ENSRNOG00000003208	Ercc6l	99	69.675	ENSFCAG00000012038	ERCC6L	99	69.817	Felis_catus
ENSRNOG00000003208	Ercc6l	96	48.236	ENSFALG00000011797	ERCC6L	99	49.102	Ficedula_albicollis
ENSRNOG00000003208	Ercc6l	99	71.394	ENSFDAG00000019713	ERCC6L	99	71.291	Fukomys_damarensis
ENSRNOG00000003208	Ercc6l	53	61.051	ENSFHEG00000007269	-	94	60.896	Fundulus_heteroclitus
ENSRNOG00000003208	Ercc6l	68	63.649	ENSFHEG00000007205	ercc6l	69	61.342	Fundulus_heteroclitus
ENSRNOG00000003208	Ercc6l	98	50.614	ENSGALG00000003881	ERCC6L	99	50.884	Gallus_gallus
ENSRNOG00000003208	Ercc6l	90	49.830	ENSGAGG00000018784	ERCC6L	99	50.340	Gopherus_agassizii
ENSRNOG00000003208	Ercc6l	99	72.771	ENSGGOG00000022367	ERCC6L	99	72.611	Gorilla_gorilla
ENSRNOG00000003208	Ercc6l	79	62.046	ENSHBUG00000007810	ercc6l	81	61.911	Haplochromis_burtoni
ENSRNOG00000003208	Ercc6l	99	71.910	ENSHGLG00000016594	ERCC6L	99	71.910	Heterocephalus_glaber_female
ENSRNOG00000003208	Ercc6l	99	71.910	ENSHGLG00100003339	ERCC6L	99	71.910	Heterocephalus_glaber_male
ENSRNOG00000003208	Ercc6l	98	45.673	ENSHCOG00000001051	ercc6l	98	45.927	Hippocampus_comes
ENSRNOG00000003208	Ercc6l	60	60.000	ENSIPUG00000016117	ercc6l	60	60.000	Ictalurus_punctatus
ENSRNOG00000003208	Ercc6l	98	73.892	ENSJJAG00000022875	Ercc6l	98	73.563	Jaculus_jaculus
ENSRNOG00000003208	Ercc6l	63	61.074	ENSKMAG00000011587	ercc6l	99	45.078	Kryptolebias_marmoratus
ENSRNOG00000003208	Ercc6l	78	58.068	ENSLBEG00000000091	ercc6l	93	58.068	Labrus_bergylta
ENSRNOG00000003208	Ercc6l	98	49.052	ENSLACG00000002634	ERCC6L	99	49.052	Latimeria_chalumnae
ENSRNOG00000003208	Ercc6l	98	46.148	ENSLOCG00000013925	ercc6l	99	46.479	Lepisosteus_oculatus
ENSRNOG00000003208	Ercc6l	99	68.054	ENSLAFG00000014985	ERCC6L	100	67.974	Loxodonta_africana
ENSRNOG00000003208	Ercc6l	99	72.532	ENSMFAG00000045509	ERCC6L	99	72.373	Macaca_fascicularis
ENSRNOG00000003208	Ercc6l	99	72.373	ENSMMUG00000012957	ERCC6L	99	72.213	Macaca_mulatta
ENSRNOG00000003208	Ercc6l	99	72.611	ENSMNEG00000030867	ERCC6L	99	72.452	Macaca_nemestrina
ENSRNOG00000003208	Ercc6l	99	72.373	ENSMLEG00000000190	ERCC6L	99	72.213	Mandrillus_leucophaeus
ENSRNOG00000003208	Ercc6l	65	59.407	ENSMAMG00000018595	ercc6l	82	59.278	Mastacembelus_armatus
ENSRNOG00000003208	Ercc6l	61	60.489	ENSMZEG00005001556	ercc6l	61	60.360	Maylandia_zebra
ENSRNOG00000003208	Ercc6l	98	51.675	ENSMGAG00000002094	ERCC6L	99	52.153	Meleagris_gallopavo
ENSRNOG00000003208	Ercc6l	98	84.571	ENSMAUG00000015560	Ercc6l	98	84.323	Mesocricetus_auratus
ENSRNOG00000003208	Ercc6l	99	71.429	ENSMICG00000035415	ERCC6L	99	71.429	Microcebus_murinus
ENSRNOG00000003208	Ercc6l	99	81.708	ENSMOCG00000021344	Ercc6l	99	81.547	Microtus_ochrogaster
ENSRNOG00000003208	Ercc6l	71	63.286	ENSMMOG00000020762	ercc6l	93	75.177	Mola_mola
ENSRNOG00000003208	Ercc6l	99	57.282	ENSMODG00000010916	ERCC6L	98	57.282	Monodelphis_domestica
ENSRNOG00000003208	Ercc6l	56	62.304	ENSMALG00000003561	-	53	62.162	Monopterus_albus
ENSRNOG00000003208	Ercc6l	99	87.823	MGP_CAROLIEiJ_G0033297	Ercc6l	99	87.903	Mus_caroli
ENSRNOG00000003208	Ercc6l	99	88.226	ENSMUSG00000051220	Ercc6l	99	88.468	Mus_musculus
ENSRNOG00000003208	Ercc6l	99	87.752	MGP_PahariEiJ_G0031835	Ercc6l	99	87.994	Mus_pahari
ENSRNOG00000003208	Ercc6l	99	88.216	MGP_SPRETEiJ_G0034461	Ercc6l	99	88.701	Mus_spretus
ENSRNOG00000003208	Ercc6l	99	68.576	ENSMPUG00000005291	ERCC6L	99	68.815	Mustela_putorius_furo
ENSRNOG00000003208	Ercc6l	98	71.440	ENSMLUG00000011670	ERCC6L	99	71.197	Myotis_lucifugus
ENSRNOG00000003208	Ercc6l	99	77.751	ENSNGAG00000021063	Ercc6l	99	77.590	Nannospalax_galili
ENSRNOG00000003208	Ercc6l	99	72.373	ENSNLEG00000036284	ERCC6L	99	72.213	Nomascus_leucogenys
ENSRNOG00000003208	Ercc6l	98	69.104	ENSODEG00000002328	ERCC6L	99	69.104	Octodon_degus
ENSRNOG00000003208	Ercc6l	59	62.032	ENSONIG00000000589	ercc6l	99	47.335	Oreochromis_niloticus
ENSRNOG00000003208	Ercc6l	98	54.123	ENSOANG00000014708	ERCC6L	98	54.203	Ornithorhynchus_anatinus
ENSRNOG00000003208	Ercc6l	98	71.890	ENSOCUG00000008724	ERCC6L	99	71.971	Oryctolagus_cuniculus
ENSRNOG00000003208	Ercc6l	56	58.129	ENSORLG00000024240	ercc6l	98	58.273	Oryzias_latipes
ENSRNOG00000003208	Ercc6l	76	62.901	ENSORLG00020014999	ercc6l	98	45.946	Oryzias_latipes_hni
ENSRNOG00000003208	Ercc6l	64	61.570	ENSOMEG00000009481	ercc6l	63	61.299	Oryzias_melastigma
ENSRNOG00000003208	Ercc6l	98	70.989	ENSOGAG00000034301	-	100	71.556	Otolemur_garnettii
ENSRNOG00000003208	Ercc6l	99	70.406	ENSOGAG00000031470	-	99	70.963	Otolemur_garnettii
ENSRNOG00000003208	Ercc6l	98	69.960	ENSOARG00000005908	ERCC6L	99	69.798	Ovis_aries
ENSRNOG00000003208	Ercc6l	99	72.691	ENSPPAG00000031861	ERCC6L	99	72.532	Pan_paniscus
ENSRNOG00000003208	Ercc6l	98	69.548	ENSPPRG00000012408	ERCC6L	99	69.692	Panthera_pardus
ENSRNOG00000003208	Ercc6l	99	72.691	ENSPTRG00000022023	ERCC6L	99	72.532	Pan_troglodytes
ENSRNOG00000003208	Ercc6l	99	72.611	ENSPANG00000011598	ERCC6L	99	72.452	Papio_anubis
ENSRNOG00000003208	Ercc6l	61	64.930	ENSPKIG00000022325	ercc6l	78	64.648	Paramormyrops_kingsleyae
ENSRNOG00000003208	Ercc6l	98	51.823	ENSPSIG00000004789	ERCC6L	99	51.354	Pelodiscus_sinensis
ENSRNOG00000003208	Ercc6l	57	62.942	ENSPMGG00000023343	ercc6l	68	63.225	Periophthalmus_magnuspinnatus
ENSRNOG00000003208	Ercc6l	100	83.897	ENSPEMG00000007920	Ercc6l	99	83.414	Peromyscus_maniculatus_bairdii
ENSRNOG00000003208	Ercc6l	62	54.650	ENSPMAG00000005064	ercc6l	98	57.525	Petromyzon_marinus
ENSRNOG00000003208	Ercc6l	99	58.401	ENSPCIG00000026973	ERCC6L	96	58.401	Phascolarctos_cinereus
ENSRNOG00000003208	Ercc6l	59	61.653	ENSPFOG00000010410	ercc6l	66	58.655	Poecilia_formosa
ENSRNOG00000003208	Ercc6l	84	64.877	ENSPLAG00000005575	ercc6l	96	64.731	Poecilia_latipinna
ENSRNOG00000003208	Ercc6l	59	61.789	ENSPMEG00000016911	ercc6l	61	61.653	Poecilia_mexicana
ENSRNOG00000003208	Ercc6l	55	64.464	ENSPREG00000017617	ercc6l	87	64.317	Poecilia_reticulata
ENSRNOG00000003208	Ercc6l	99	72.930	ENSPPYG00000020461	ERCC6L	99	72.771	Pongo_abelii
ENSRNOG00000003208	Ercc6l	62	79.630	ENSPCAG00000002981	-	68	79.630	Procavia_capensis
ENSRNOG00000003208	Ercc6l	99	72.032	ENSPCOG00000024286	ERCC6L	99	72.032	Propithecus_coquereli
ENSRNOG00000003208	Ercc6l	100	64.524	ENSPVAG00000013596	ERCC6L	99	64.133	Pteropus_vampyrus
ENSRNOG00000003208	Ercc6l	84	61.387	ENSPNYG00000013185	ercc6l	93	61.257	Pundamilia_nyererei
ENSRNOG00000003208	Ercc6l	58	66.257	ENSPNAG00000006556	ercc6l	97	50.171	Pygocentrus_nattereri
ENSRNOG00000003208	Ercc6l	97	71.803	ENSRBIG00000036588	ERCC6L	99	71.639	Rhinopithecus_bieti
ENSRNOG00000003208	Ercc6l	99	72.293	ENSRROG00000042561	ERCC6L	99	72.134	Rhinopithecus_roxellana
ENSRNOG00000003208	Ercc6l	100	71.997	ENSSBOG00000029416	ERCC6L	100	71.838	Saimiri_boliviensis_boliviensis
ENSRNOG00000003208	Ercc6l	99	56.856	ENSSHAG00000012578	-	99	56.694	Sarcophilus_harrisii
ENSRNOG00000003208	Ercc6l	90	57.825	ENSSHAG00000001331	-	97	59.509	Sarcophilus_harrisii
ENSRNOG00000003208	Ercc6l	81	63.434	ENSSFOG00015009709	ercc6l	72	63.303	Scleropages_formosus
ENSRNOG00000003208	Ercc6l	51	42.163	ENSSFOG00015014557	-	50	42.031	Scleropages_formosus
ENSRNOG00000003208	Ercc6l	57	62.801	ENSSDUG00000013307	ercc6l	60	62.659	Seriola_dumerili
ENSRNOG00000003208	Ercc6l	57	62.801	ENSSLDG00000014910	ercc6l	63	62.659	Seriola_lalandi_dorsalis
ENSRNOG00000003208	Ercc6l	79	63.648	ENSSPUG00000005866	ERCC6L	89	66.265	Sphenodon_punctatus
ENSRNOG00000003208	Ercc6l	98	44.049	ENSSPAG00000018472	ercc6l	99	44.375	Stegastes_partitus
ENSRNOG00000003208	Ercc6l	99	70.883	ENSSSCG00000021834	ERCC6L	99	71.065	Sus_scrofa
ENSRNOG00000003208	Ercc6l	98	44.287	ENSTRUG00000012053	ercc6l	99	45.690	Takifugu_rubripes
ENSRNOG00000003208	Ercc6l	99	71.065	ENSTTRG00000010777	ERCC6L	99	71.065	Tursiops_truncatus
ENSRNOG00000003208	Ercc6l	90	69.665	ENSUAMG00000015605	ERCC6L	99	69.665	Ursus_americanus
ENSRNOG00000003208	Ercc6l	90	69.665	ENSUMAG00000004863	ERCC6L	99	69.665	Ursus_maritimus
ENSRNOG00000003208	Ercc6l	99	71.360	ENSVPAG00000010950	ERCC6L	99	71.360	Vicugna_pacos
ENSRNOG00000003208	Ercc6l	99	69.261	ENSVVUG00000025512	ERCC6L	98	69.182	Vulpes_vulpes
ENSRNOG00000003208	Ercc6l	98	48.456	ENSXETG00000022574	ercc6l	99	48.298	Xenopus_tropicalis
ENSRNOG00000003208	Ercc6l	51	63.391	ENSXCOG00000011494	ercc6l	90	63.391	Xiphophorus_couchianus
ENSRNOG00000003208	Ercc6l	80	63.764	ENSXMAG00000000948	ercc6l	92	63.624	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0015616	DNA translocase activity	-	IEA	Function
GO:0015616	DNA translocase activity	-	ISO	Function