EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003211 (Gene tree)
Gene ID: 690345
Gene Symbol: Srp9
Alias: LOC690345
Full Name: signal recognition particle 9
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 8141 bases
Position: chr13:100551307-100559447
Accession: 1597343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000004297	SRP9-21	PF05486.12	1.2e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000004297	-	1328	-	ENSRNOP00000004297	86 (aa)	-	D4A511

Gene Model

Click here to download ENSRNOG00000003211's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003211	Srp9	100	90.698	ENSG00000143742	SRP9	100	90.698	Homo_sapiens
ENSRNOG00000003211	Srp9	100	79.070	ENSAPOG00000006089	srp9	100	79.070	Acanthochromis_polyacanthus
ENSRNOG00000003211	Srp9	100	94.186	ENSAMEG00000014744	SRP9	100	94.186	Ailuropoda_melanoleuca
ENSRNOG00000003211	Srp9	100	56.977	ENSACIG00000022298	srp9	100	56.977	Amphilophus_citrinellus
ENSRNOG00000003211	Srp9	100	79.070	ENSAOCG00000014643	srp9	100	79.070	Amphiprion_ocellaris
ENSRNOG00000003211	Srp9	100	79.070	ENSAPEG00000004398	srp9	100	79.070	Amphiprion_percula
ENSRNOG00000003211	Srp9	100	80.233	ENSATEG00000014339	srp9	100	80.233	Anabas_testudineus
ENSRNOG00000003211	Srp9	81	90.000	ENSAPLG00000015368	SRP9	100	90.000	Anas_platyrhynchos
ENSRNOG00000003211	Srp9	100	91.860	ENSACAG00000005788	SRP9	100	91.860	Anolis_carolinensis
ENSRNOG00000003211	Srp9	100	93.023	ENSANAG00000022626	SRP9	100	93.023	Aotus_nancymaae
ENSRNOG00000003211	Srp9	100	80.233	ENSACLG00000018392	srp9	100	80.233	Astatotilapia_calliptera
ENSRNOG00000003211	Srp9	100	80.233	ENSAMXG00000010366	srp9	100	80.233	Astyanax_mexicanus
ENSRNOG00000003211	Srp9	100	94.186	ENSBTAG00000033322	SRP9	100	94.186	Bos_taurus
ENSRNOG00000003211	Srp9	88	52.632	WBGene00013984	ZK512.4	100	52.632	Caenorhabditis_elegans
ENSRNOG00000003211	Srp9	100	93.023	ENSCJAG00000040095	SRP9	100	93.023	Callithrix_jacchus
ENSRNOG00000003211	Srp9	100	94.186	ENSCAFG00000016162	SRP9	100	94.186	Canis_familiaris
ENSRNOG00000003211	Srp9	100	94.186	ENSCAFG00020003285	SRP9	100	94.186	Canis_lupus_dingo
ENSRNOG00000003211	Srp9	100	94.186	ENSCHIG00000006407	SRP9	100	94.186	Capra_hircus
ENSRNOG00000003211	Srp9	100	87.209	ENSTSYG00000026832	SRP9	100	87.209	Carlito_syrichta
ENSRNOG00000003211	Srp9	100	90.698	ENSCPOG00000033454	SRP9	100	90.698	Cavia_porcellus
ENSRNOG00000003211	Srp9	100	91.860	ENSCCAG00000034464	SRP9	100	91.860	Cebus_capucinus
ENSRNOG00000003211	Srp9	100	90.698	ENSCATG00000041813	SRP9	100	90.698	Cercocebus_atys
ENSRNOG00000003211	Srp9	100	91.860	ENSCLAG00000001368	-	100	91.860	Chinchilla_lanigera
ENSRNOG00000003211	Srp9	99	84.706	ENSCLAG00000017687	-	99	84.706	Chinchilla_lanigera
ENSRNOG00000003211	Srp9	58	96.000	ENSCHOG00000008435	-	100	96.000	Choloepus_hoffmanni
ENSRNOG00000003211	Srp9	100	94.186	ENSCHOG00000006096	-	100	94.186	Choloepus_hoffmanni
ENSRNOG00000003211	Srp9	100	60.465	ENSCHOG00000012912	-	100	60.465	Choloepus_hoffmanni
ENSRNOG00000003211	Srp9	100	90.698	ENSCPBG00000011999	SRP9	100	90.698	Chrysemys_picta_bellii
ENSRNOG00000003211	Srp9	100	89.535	ENSCANG00000012015	-	100	89.535	Colobus_angolensis_palliatus
ENSRNOG00000003211	Srp9	100	90.698	ENSCANG00000030765	-	100	90.698	Colobus_angolensis_palliatus
ENSRNOG00000003211	Srp9	100	97.674	ENSCGRG00001008910	Srp9	100	97.674	Cricetulus_griseus_chok1gshd
ENSRNOG00000003211	Srp9	74	93.750	ENSCGRG00000009651	Srp9	84	93.750	Cricetulus_griseus_crigri
ENSRNOG00000003211	Srp9	100	79.070	ENSCSEG00000018438	srp9	100	79.070	Cynoglossus_semilaevis
ENSRNOG00000003211	Srp9	100	81.395	ENSCVAG00000001083	srp9	100	81.395	Cyprinodon_variegatus
ENSRNOG00000003211	Srp9	100	77.907	ENSDARG00000042851	srp9	100	77.907	Danio_rerio
ENSRNOG00000003211	Srp9	100	94.186	ENSDNOG00000013412	-	100	94.186	Dasypus_novemcinctus
ENSRNOG00000003211	Srp9	85	38.356	FBgn0035827	Srp9	95	38.356	Drosophila_melanogaster
ENSRNOG00000003211	Srp9	100	83.721	ENSETEG00000012291	SRP9	100	83.721	Echinops_telfairi
ENSRNOG00000003211	Srp9	98	67.857	ENSEBUG00000009080	srp9	100	67.857	Eptatretus_burgeri
ENSRNOG00000003211	Srp9	100	94.186	ENSECAG00000033839	SRP9	100	94.186	Equus_caballus
ENSRNOG00000003211	Srp9	100	87.209	ENSEEUG00000001344	SRP9	100	87.209	Erinaceus_europaeus
ENSRNOG00000003211	Srp9	100	81.395	ENSELUG00000001506	srp9	100	81.395	Esox_lucius
ENSRNOG00000003211	Srp9	100	94.186	ENSFCAG00000010275	SRP9	62	94.186	Felis_catus
ENSRNOG00000003211	Srp9	100	89.535	ENSFALG00000011689	SRP9	100	89.535	Ficedula_albicollis
ENSRNOG00000003211	Srp9	100	93.023	ENSFDAG00000020469	SRP9	100	93.023	Fukomys_damarensis
ENSRNOG00000003211	Srp9	100	81.395	ENSFHEG00000011666	srp9	100	81.395	Fundulus_heteroclitus
ENSRNOG00000003211	Srp9	100	81.395	ENSGMOG00000003565	srp9	100	81.395	Gadus_morhua
ENSRNOG00000003211	Srp9	100	88.372	ENSGALG00000026009	SRP9	100	88.372	Gallus_gallus
ENSRNOG00000003211	Srp9	100	80.233	ENSGAFG00000009506	srp9	100	80.233	Gambusia_affinis
ENSRNOG00000003211	Srp9	100	79.070	ENSGACG00000004110	srp9	100	79.070	Gasterosteus_aculeatus
ENSRNOG00000003211	Srp9	100	90.698	ENSGAGG00000017129	SRP9	100	90.698	Gopherus_agassizii
ENSRNOG00000003211	Srp9	100	90.698	ENSGGOG00000011555	SRP9	100	90.698	Gorilla_gorilla
ENSRNOG00000003211	Srp9	100	80.233	ENSHBUG00000021430	srp9	100	80.233	Haplochromis_burtoni
ENSRNOG00000003211	Srp9	98	82.143	ENSHGLG00000006535	-	99	82.143	Heterocephalus_glaber_female
ENSRNOG00000003211	Srp9	81	88.571	ENSHGLG00000019830	-	100	88.571	Heterocephalus_glaber_female
ENSRNOG00000003211	Srp9	100	88.372	ENSHGLG00000020168	-	100	88.372	Heterocephalus_glaber_female
ENSRNOG00000003211	Srp9	93	96.250	ENSHGLG00000020925	-	100	96.250	Heterocephalus_glaber_female
ENSRNOG00000003211	Srp9	100	94.186	ENSHGLG00000002329	SRP9	100	94.186	Heterocephalus_glaber_female
ENSRNOG00000003211	Srp9	100	94.186	ENSHGLG00100019986	-	100	94.186	Heterocephalus_glaber_male
ENSRNOG00000003211	Srp9	95	92.683	ENSHGLG00100016521	-	100	92.683	Heterocephalus_glaber_male
ENSRNOG00000003211	Srp9	100	88.372	ENSHGLG00100020800	-	100	88.372	Heterocephalus_glaber_male
ENSRNOG00000003211	Srp9	98	82.143	ENSHGLG00100009760	-	99	82.143	Heterocephalus_glaber_male
ENSRNOG00000003211	Srp9	100	76.744	ENSHGLG00100011806	-	100	76.744	Heterocephalus_glaber_male
ENSRNOG00000003211	Srp9	100	58.140	ENSHCOG00000006978	srp9	100	58.140	Hippocampus_comes
ENSRNOG00000003211	Srp9	100	79.070	ENSIPUG00000020674	srp9	100	79.070	Ictalurus_punctatus
ENSRNOG00000003211	Srp9	100	94.186	ENSSTOG00000026827	SRP9	100	94.186	Ictidomys_tridecemlineatus
ENSRNOG00000003211	Srp9	100	88.372	ENSJJAG00000016583	Srp9	100	88.372	Jaculus_jaculus
ENSRNOG00000003211	Srp9	100	81.395	ENSKMAG00000014117	srp9	100	81.395	Kryptolebias_marmoratus
ENSRNOG00000003211	Srp9	100	80.233	ENSLBEG00000020620	srp9	100	80.233	Labrus_bergylta
ENSRNOG00000003211	Srp9	100	83.721	ENSLACG00000007546	SRP9	100	83.721	Latimeria_chalumnae
ENSRNOG00000003211	Srp9	100	82.558	ENSLOCG00000015903	srp9	100	82.558	Lepisosteus_oculatus
ENSRNOG00000003211	Srp9	100	95.349	ENSLAFG00000004081	SRP9	100	95.349	Loxodonta_africana
ENSRNOG00000003211	Srp9	100	90.698	ENSMFAG00000002641	SRP9	100	90.698	Macaca_fascicularis
ENSRNOG00000003211	Srp9	100	90.698	ENSMMUG00000000134	SRP9	100	90.698	Macaca_mulatta
ENSRNOG00000003211	Srp9	100	90.698	ENSMNEG00000043512	SRP9	100	90.698	Macaca_nemestrina
ENSRNOG00000003211	Srp9	100	90.698	ENSMLEG00000037309	SRP9	100	90.698	Mandrillus_leucophaeus
ENSRNOG00000003211	Srp9	100	80.233	ENSMAMG00000004755	srp9	100	80.233	Mastacembelus_armatus
ENSRNOG00000003211	Srp9	100	80.233	ENSMZEG00005015517	srp9	100	80.233	Maylandia_zebra
ENSRNOG00000003211	Srp9	100	88.372	ENSMGAG00000008061	SRP9	100	88.372	Meleagris_gallopavo
ENSRNOG00000003211	Srp9	100	97.674	ENSMAUG00000017552	Srp9	100	97.674	Mesocricetus_auratus
ENSRNOG00000003211	Srp9	100	93.023	ENSMICG00000030104	-	100	93.023	Microcebus_murinus
ENSRNOG00000003211	Srp9	100	97.674	ENSMOCG00000012590	Srp9	100	97.674	Microtus_ochrogaster
ENSRNOG00000003211	Srp9	100	77.011	ENSMMOG00000014838	srp9	100	77.011	Mola_mola
ENSRNOG00000003211	Srp9	100	94.186	ENSMODG00000025664	SRP9	100	94.186	Monodelphis_domestica
ENSRNOG00000003211	Srp9	100	77.907	ENSMALG00000004262	srp9	100	77.907	Monopterus_albus
ENSRNOG00000003211	Srp9	100	97.674	MGP_CAROLIEiJ_G0014997	Srp9	100	97.674	Mus_caroli
ENSRNOG00000003211	Srp9	100	97.674	ENSMUSG00000026511	Srp9	100	97.674	Mus_musculus
ENSRNOG00000003211	Srp9	100	95.349	MGP_PahariEiJ_G0028229	Srp9	100	95.349	Mus_pahari
ENSRNOG00000003211	Srp9	100	97.674	MGP_SPRETEiJ_G0015797	Srp9	100	97.674	Mus_spretus
ENSRNOG00000003211	Srp9	100	95.349	ENSMLUG00000014914	SRP9	100	95.349	Myotis_lucifugus
ENSRNOG00000003211	Srp9	100	98.837	ENSNGAG00000019936	Srp9	100	98.837	Nannospalax_galili
ENSRNOG00000003211	Srp9	100	80.233	ENSNBRG00000010915	srp9	100	80.233	Neolamprologus_brichardi
ENSRNOG00000003211	Srp9	100	90.698	ENSNLEG00000013740	SRP9	100	90.698	Nomascus_leucogenys
ENSRNOG00000003211	Srp9	100	94.186	ENSOPRG00000012133	SRP9	100	94.186	Ochotona_princeps
ENSRNOG00000003211	Srp9	100	85.227	ENSODEG00000010125	-	76	85.227	Octodon_degus
ENSRNOG00000003211	Srp9	100	88.372	ENSODEG00000015075	-	100	88.372	Octodon_degus
ENSRNOG00000003211	Srp9	100	79.070	ENSONIG00000011409	srp9	100	79.070	Oreochromis_niloticus
ENSRNOG00000003211	Srp9	100	93.023	ENSOANG00000001472	SRP9	100	93.023	Ornithorhynchus_anatinus
ENSRNOG00000003211	Srp9	100	94.186	ENSOCUG00000010791	SRP9	100	94.186	Oryctolagus_cuniculus
ENSRNOG00000003211	Srp9	100	79.070	ENSORLG00020003090	srp9	100	79.070	Oryzias_latipes_hni
ENSRNOG00000003211	Srp9	100	79.070	ENSORLG00015001636	srp9	89	79.070	Oryzias_latipes_hsok
ENSRNOG00000003211	Srp9	100	80.233	ENSOMEG00000020548	srp9	100	80.233	Oryzias_melastigma
ENSRNOG00000003211	Srp9	100	90.698	ENSOGAG00000031299	-	100	90.698	Otolemur_garnettii
ENSRNOG00000003211	Srp9	100	90.698	ENSOGAG00000001752	-	100	90.698	Otolemur_garnettii
ENSRNOG00000003211	Srp9	100	90.698	ENSPPAG00000042680	SRP9	100	90.698	Pan_paniscus
ENSRNOG00000003211	Srp9	100	94.186	ENSPPRG00000011732	SRP9	100	94.186	Panthera_pardus
ENSRNOG00000003211	Srp9	71	95.082	ENSPTIG00000014838	SRP9	71	95.082	Panthera_tigris_altaica
ENSRNOG00000003211	Srp9	100	90.698	ENSPTRG00000002038	SRP9	100	90.698	Pan_troglodytes
ENSRNOG00000003211	Srp9	100	90.698	ENSPANG00000030164	SRP9	100	90.698	Papio_anubis
ENSRNOG00000003211	Srp9	100	79.070	ENSPKIG00000015012	srp9	100	79.070	Paramormyrops_kingsleyae
ENSRNOG00000003211	Srp9	100	90.698	ENSPSIG00000014842	SRP9	100	90.698	Pelodiscus_sinensis
ENSRNOG00000003211	Srp9	100	58.140	ENSPMGG00000002318	srp9	100	58.140	Periophthalmus_magnuspinnatus
ENSRNOG00000003211	Srp9	100	98.837	ENSPEMG00000022774	Srp9	100	98.837	Peromyscus_maniculatus_bairdii
ENSRNOG00000003211	Srp9	100	94.186	ENSPCIG00000017399	SRP9	100	94.186	Phascolarctos_cinereus
ENSRNOG00000003211	Srp9	100	80.233	ENSPREG00000020242	srp9	100	80.233	Poecilia_reticulata
ENSRNOG00000003211	Srp9	97	90.361	ENSPPYG00000000174	SRP9	100	90.361	Pongo_abelii
ENSRNOG00000003211	Srp9	100	94.186	ENSPCAG00000014886	SRP9	100	94.186	Procavia_capensis
ENSRNOG00000003211	Srp9	71	91.803	ENSPCOG00000021743	-	98	91.803	Propithecus_coquereli
ENSRNOG00000003211	Srp9	100	73.034	ENSPCOG00000012531	-	100	73.034	Propithecus_coquereli
ENSRNOG00000003211	Srp9	100	94.186	ENSPVAG00000008142	SRP9	100	94.186	Pteropus_vampyrus
ENSRNOG00000003211	Srp9	100	80.233	ENSPNYG00000010536	srp9	100	80.233	Pundamilia_nyererei
ENSRNOG00000003211	Srp9	100	79.070	ENSPNAG00000008264	srp9	100	79.070	Pygocentrus_nattereri
ENSRNOG00000003211	Srp9	100	90.698	ENSRBIG00000040480	SRP9	100	90.698	Rhinopithecus_bieti
ENSRNOG00000003211	Srp9	100	90.698	ENSRROG00000028703	SRP9	100	90.698	Rhinopithecus_roxellana
ENSRNOG00000003211	Srp9	100	93.023	ENSSBOG00000034573	SRP9	100	93.023	Saimiri_boliviensis_boliviensis
ENSRNOG00000003211	Srp9	100	94.186	ENSSHAG00000013504	SRP9	100	94.186	Sarcophilus_harrisii
ENSRNOG00000003211	Srp9	100	77.907	ENSSFOG00015000310	srp9	100	77.907	Scleropages_formosus
ENSRNOG00000003211	Srp9	100	79.070	ENSSMAG00000001318	srp9	100	79.070	Scophthalmus_maximus
ENSRNOG00000003211	Srp9	100	79.070	ENSSDUG00000008772	srp9	100	79.070	Seriola_dumerili
ENSRNOG00000003211	Srp9	87	82.667	ENSSLDG00000019141	srp9	95	82.667	Seriola_lalandi_dorsalis
ENSRNOG00000003211	Srp9	99	69.412	ENSSPUG00000014436	SRP9	99	69.412	Sphenodon_punctatus
ENSRNOG00000003211	Srp9	100	80.233	ENSSPAG00000017244	srp9	100	80.233	Stegastes_partitus
ENSRNOG00000003211	Srp9	100	94.186	ENSSSCG00000031664	-	100	94.186	Sus_scrofa
ENSRNOG00000003211	Srp9	100	89.535	ENSTGUG00000004123	SRP9	100	89.535	Taeniopygia_guttata
ENSRNOG00000003211	Srp9	100	79.070	ENSTRUG00000024107	srp9	100	79.070	Takifugu_rubripes
ENSRNOG00000003211	Srp9	100	80.233	ENSTNIG00000007254	srp9	100	80.233	Tetraodon_nigroviridis
ENSRNOG00000003211	Srp9	100	91.860	ENSTBEG00000005634	SRP9	100	91.860	Tupaia_belangeri
ENSRNOG00000003211	Srp9	71	95.082	ENSTTRG00000010081	SRP9	98	95.082	Tursiops_truncatus
ENSRNOG00000003211	Srp9	100	94.186	ENSUAMG00000020489	SRP9	100	94.186	Ursus_americanus
ENSRNOG00000003211	Srp9	100	94.186	ENSUMAG00000015908	SRP9	100	94.186	Ursus_maritimus
ENSRNOG00000003211	Srp9	71	95.082	ENSVPAG00000001698	SRP9	98	95.082	Vicugna_pacos
ENSRNOG00000003211	Srp9	100	94.186	ENSVVUG00000002065	SRP9	100	94.186	Vulpes_vulpes
ENSRNOG00000003211	Srp9	100	79.070	ENSXCOG00000000662	srp9	100	79.070	Xiphophorus_couchianus
ENSRNOG00000003211	Srp9	100	79.070	ENSXMAG00000029514	srp9	100	79.070	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	21873635.	IBA	Component
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0008312	7S RNA binding	-	IEA	Function
GO:0045900	negative regulation of translational elongation	-	IEA	Process