EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003213 (Gene tree)
Gene ID: 287773
Gene Symbol: Helz
Alias: LOC287773
Full Name: helicase with zinc finger
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 136774 bases
Position: chr10:95770154-95906927
Accession: 1307049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000038016	zf-CCCH	PF00642.24	1.3e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000030300	-	6193	XM_006247562	ENSRNOP00000038016	1964 (aa)	XP_006247624	D4ADZ6

Gene Model

Click here to download ENSRNOG00000003213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003213	Helz	100	90.733	ENSG00000198265	HELZ	98	95.414	Homo_sapiens
ENSRNOG00000003213	Helz	100	57.808	ENSAPOG00000001626	helz	100	58.120	Acanthochromis_polyacanthus
ENSRNOG00000003213	Helz	100	89.980	ENSAMEG00000018396	HELZ	100	90.031	Ailuropoda_melanoleuca
ENSRNOG00000003213	Helz	71	73.029	ENSAOCG00000018131	helz	83	72.854	Amphiprion_ocellaris
ENSRNOG00000003213	Helz	100	58.412	ENSATEG00000007191	helz	100	57.927	Anabas_testudineus
ENSRNOG00000003213	Helz	100	81.606	ENSAPLG00000007762	HELZ	100	81.402	Anas_platyrhynchos
ENSRNOG00000003213	Helz	100	79.211	ENSACAG00000000206	HELZ	100	79.160	Anolis_carolinensis
ENSRNOG00000003213	Helz	100	90.224	ENSANAG00000037949	HELZ	100	90.173	Aotus_nancymaae
ENSRNOG00000003213	Helz	99	60.778	ENSAMXG00000020742	helz	100	60.623	Astyanax_mexicanus
ENSRNOG00000003213	Helz	100	88.199	ENSBTAG00000004746	HELZ	100	88.352	Bos_taurus
ENSRNOG00000003213	Helz	100	90.377	ENSCJAG00000032527	HELZ	100	90.326	Callithrix_jacchus
ENSRNOG00000003213	Helz	100	89.929	ENSCAFG00000011422	HELZ	100	89.980	Canis_familiaris
ENSRNOG00000003213	Helz	100	89.426	ENSCAFG00020026103	HELZ	100	89.476	Canis_lupus_dingo
ENSRNOG00000003213	Helz	100	86.419	ENSCHIG00000002760	HELZ	100	86.521	Capra_hircus
ENSRNOG00000003213	Helz	92	93.309	ENSTSYG00000009414	HELZ	94	93.139	Carlito_syrichta
ENSRNOG00000003213	Helz	76	80.000	ENSCAPG00000013940	HELZ	96	80.417	Cavia_aperea
ENSRNOG00000003213	Helz	94	90.448	ENSCPOG00000014911	HELZ	98	90.394	Cavia_porcellus
ENSRNOG00000003213	Helz	100	90.479	ENSCATG00000037268	HELZ	100	90.428	Cercocebus_atys
ENSRNOG00000003213	Helz	100	89.562	ENSCLAG00000004638	HELZ	100	89.409	Chinchilla_lanigera
ENSRNOG00000003213	Helz	100	90.682	ENSCSAG00000004152	HELZ	100	90.631	Chlorocebus_sabaeus
ENSRNOG00000003213	Helz	100	81.961	ENSCPBG00000009548	HELZ	100	81.786	Chrysemys_picta_bellii
ENSRNOG00000003213	Helz	96	91.709	ENSCANG00000029169	HELZ	99	91.709	Colobus_angolensis_palliatus
ENSRNOG00000003213	Helz	100	93.635	ENSCGRG00001015066	Helz	100	93.483	Cricetulus_griseus_chok1gshd
ENSRNOG00000003213	Helz	100	93.585	ENSCGRG00000012094	Helz	100	93.432	Cricetulus_griseus_crigri
ENSRNOG00000003213	Helz	95	71.737	ENSCSEG00000012232	helz	100	57.044	Cynoglossus_semilaevis
ENSRNOG00000003213	Helz	100	60.702	ENSDARG00000030560	helz	100	60.140	Danio_rerio
ENSRNOG00000003213	Helz	100	89.064	ENSDNOG00000007899	HELZ	100	88.911	Dasypus_novemcinctus
ENSRNOG00000003213	Helz	50	95.960	ENSEASG00005015902	HELZ	95	95.960	Equus_asinus_asinus
ENSRNOG00000003213	Helz	100	89.827	ENSECAG00000010404	HELZ	100	89.878	Equus_caballus
ENSRNOG00000003213	Helz	52	96.970	ENSEEUG00000010327	-	56	96.970	Erinaceus_europaeus
ENSRNOG00000003213	Helz	100	59.920	ENSELUG00000014335	helz	100	59.921	Esox_lucius
ENSRNOG00000003213	Helz	100	89.059	ENSFCAG00000011711	HELZ	100	89.160	Felis_catus
ENSRNOG00000003213	Helz	100	81.066	ENSFALG00000002404	HELZ	100	81.015	Ficedula_albicollis
ENSRNOG00000003213	Helz	100	89.766	ENSFDAG00000008065	HELZ	100	90.224	Fukomys_damarensis
ENSRNOG00000003213	Helz	94	66.043	ENSFHEG00000016609	helz	98	65.953	Fundulus_heteroclitus
ENSRNOG00000003213	Helz	68	71.747	ENSGMOG00000009758	helz	97	68.754	Gadus_morhua
ENSRNOG00000003213	Helz	96	81.919	ENSGALG00000027152	HELZ	99	81.707	Gallus_gallus
ENSRNOG00000003213	Helz	70	69.943	ENSGACG00000018530	helz	97	68.483	Gasterosteus_aculeatus
ENSRNOG00000003213	Helz	76	81.074	ENSGAGG00000006506	-	98	83.034	Gopherus_agassizii
ENSRNOG00000003213	Helz	100	90.530	ENSGGOG00000012312	HELZ	100	90.479	Gorilla_gorilla
ENSRNOG00000003213	Helz	100	58.188	ENSHBUG00000015322	helz	100	57.413	Haplochromis_burtoni
ENSRNOG00000003213	Helz	97	93.939	ENSHGLG00000000732	HELZ	100	93.939	Heterocephalus_glaber_female
ENSRNOG00000003213	Helz	100	90.275	ENSHGLG00100002144	HELZ	100	90.173	Heterocephalus_glaber_male
ENSRNOG00000003213	Helz	100	58.573	ENSHCOG00000019617	helz	100	68.300	Hippocampus_comes
ENSRNOG00000003213	Helz	91	72.714	ENSIPUG00000003010	helz	97	71.367	Ictalurus_punctatus
ENSRNOG00000003213	Helz	100	90.530	ENSSTOG00000007818	HELZ	100	90.428	Ictidomys_tridecemlineatus
ENSRNOG00000003213	Helz	100	87.678	ENSJJAG00000019941	Helz	100	87.780	Jaculus_jaculus
ENSRNOG00000003213	Helz	94	71.916	ENSKMAG00000017251	helz	97	61.305	Kryptolebias_marmoratus
ENSRNOG00000003213	Helz	99	69.536	ENSLACG00000010742	HELZ	100	69.176	Latimeria_chalumnae
ENSRNOG00000003213	Helz	100	65.818	ENSLOCG00000013617	helz	100	65.916	Lepisosteus_oculatus
ENSRNOG00000003213	Helz	100	88.651	ENSLAFG00000003860	HELZ	100	88.550	Loxodonta_africana
ENSRNOG00000003213	Helz	100	90.682	ENSMFAG00000045166	HELZ	100	90.631	Macaca_fascicularis
ENSRNOG00000003213	Helz	100	90.682	ENSMMUG00000002959	HELZ	100	90.631	Macaca_mulatta
ENSRNOG00000003213	Helz	100	90.580	ENSMNEG00000037121	HELZ	100	90.530	Macaca_nemestrina
ENSRNOG00000003213	Helz	100	90.682	ENSMLEG00000039575	HELZ	100	90.631	Mandrillus_leucophaeus
ENSRNOG00000003213	Helz	99	62.059	ENSMAMG00000016108	helz	97	61.396	Mastacembelus_armatus
ENSRNOG00000003213	Helz	100	58.235	ENSMZEG00005001957	helz	100	57.454	Maylandia_zebra
ENSRNOG00000003213	Helz	100	80.183	ENSMGAG00000007422	HELZ	100	80.365	Meleagris_gallopavo
ENSRNOG00000003213	Helz	100	92.366	ENSMAUG00000013803	Helz	100	92.163	Mesocricetus_auratus
ENSRNOG00000003213	Helz	100	90.835	ENSMICG00000013321	HELZ	100	90.682	Microcebus_murinus
ENSRNOG00000003213	Helz	97	87.412	ENSMODG00000004034	HELZ	99	87.412	Monodelphis_domestica
ENSRNOG00000003213	Helz	100	96.029	MGP_CAROLIEiJ_G0017337	Helz	100	96.029	Mus_caroli
ENSRNOG00000003213	Helz	100	96.336	ENSMUSG00000020721	Helz	100	96.336	Mus_musculus
ENSRNOG00000003213	Helz	100	96.079	MGP_PahariEiJ_G0018467	Helz	100	96.079	Mus_pahari
ENSRNOG00000003213	Helz	100	95.115	MGP_SPRETEiJ_G0018181	Helz	100	95.165	Mus_spretus
ENSRNOG00000003213	Helz	100	87.436	ENSMPUG00000014672	HELZ	100	87.538	Mustela_putorius_furo
ENSRNOG00000003213	Helz	100	89.268	ENSMLUG00000000962	HELZ	100	89.030	Myotis_lucifugus
ENSRNOG00000003213	Helz	100	90.428	ENSNGAG00000023219	Helz	100	90.631	Nannospalax_galili
ENSRNOG00000003213	Helz	70	63.839	ENSNBRG00000003933	helz	94	63.288	Neolamprologus_brichardi
ENSRNOG00000003213	Helz	100	90.428	ENSNLEG00000000218	HELZ	100	90.377	Nomascus_leucogenys
ENSRNOG00000003213	Helz	100	59.479	ENSONIG00000006486	helz	100	58.265	Oreochromis_niloticus
ENSRNOG00000003213	Helz	100	81.754	ENSOANG00000008056	HELZ	100	81.722	Ornithorhynchus_anatinus
ENSRNOG00000003213	Helz	97	88.417	ENSOCUG00000008856	HELZ	100	88.174	Oryctolagus_cuniculus
ENSRNOG00000003213	Helz	100	58.800	ENSORLG00000013894	helz	100	58.457	Oryzias_latipes
ENSRNOG00000003213	Helz	100	59.265	ENSORLG00020021251	helz	99	60.826	Oryzias_latipes_hni
ENSRNOG00000003213	Helz	100	58.270	ENSORLG00015022086	helz	100	58.077	Oryzias_latipes_hsok
ENSRNOG00000003213	Helz	98	58.821	ENSOMEG00000008739	helz	99	58.488	Oryzias_melastigma
ENSRNOG00000003213	Helz	100	90.020	ENSOGAG00000002482	HELZ	100	90.275	Otolemur_garnettii
ENSRNOG00000003213	Helz	100	86.521	ENSOARG00000015884	HELZ	100	86.623	Ovis_aries
ENSRNOG00000003213	Helz	100	90.682	ENSPPAG00000036899	HELZ	100	90.631	Pan_paniscus
ENSRNOG00000003213	Helz	100	89.155	ENSPPRG00000024752	HELZ	100	89.206	Panthera_pardus
ENSRNOG00000003213	Helz	100	88.651	ENSPTIG00000020571	HELZ	100	88.753	Panthera_tigris_altaica
ENSRNOG00000003213	Helz	100	90.479	ENSPTRG00000009562	HELZ	100	90.428	Pan_troglodytes
ENSRNOG00000003213	Helz	91	90.720	ENSPANG00000020569	HELZ	100	90.664	Papio_anubis
ENSRNOG00000003213	Helz	100	63.732	ENSPKIG00000006157	helz	100	63.714	Paramormyrops_kingsleyae
ENSRNOG00000003213	Helz	100	82.188	ENSPSIG00000005225	HELZ	100	82.012	Pelodiscus_sinensis
ENSRNOG00000003213	Helz	88	58.586	ENSPMGG00000002314	helz	73	71.055	Periophthalmus_magnuspinnatus
ENSRNOG00000003213	Helz	100	60.236	ENSPFOG00000013386	helz	100	59.655	Poecilia_formosa
ENSRNOG00000003213	Helz	99	58.627	ENSPLAG00000020664	helz	98	58.166	Poecilia_latipinna
ENSRNOG00000003213	Helz	97	70.070	ENSPMEG00000011144	helz	100	58.809	Poecilia_mexicana
ENSRNOG00000003213	Helz	97	70.056	ENSPREG00000000245	helz	100	58.576	Poecilia_reticulata
ENSRNOG00000003213	Helz	79	93.682	ENSPPYG00000008564	-	100	91.053	Pongo_abelii
ENSRNOG00000003213	Helz	95	89.580	ENSPCAG00000001731	HELZ	95	89.580	Procavia_capensis
ENSRNOG00000003213	Helz	100	89.358	ENSPCOG00000016213	HELZ	100	89.257	Propithecus_coquereli
ENSRNOG00000003213	Helz	100	58.282	ENSPNYG00000018395	helz	100	57.480	Pundamilia_nyererei
ENSRNOG00000003213	Helz	94	70.984	ENSPNAG00000016575	helz	100	60.777	Pygocentrus_nattereri
ENSRNOG00000003213	Helz	100	89.781	ENSRBIG00000026299	HELZ	100	90.607	Rhinopithecus_bieti
ENSRNOG00000003213	Helz	100	90.631	ENSRROG00000038961	HELZ	100	90.580	Rhinopithecus_roxellana
ENSRNOG00000003213	Helz	100	90.173	ENSSBOG00000033082	HELZ	100	90.122	Saimiri_boliviensis_boliviensis
ENSRNOG00000003213	Helz	100	62.965	ENSSFOG00015005413	helz	100	62.750	Scleropages_formosus
ENSRNOG00000003213	Helz	99	60.631	ENSSMAG00000018328	helz	96	60.718	Scophthalmus_maximus
ENSRNOG00000003213	Helz	100	57.169	ENSSDUG00000011381	helz	100	57.525	Seriola_dumerili
ENSRNOG00000003213	Helz	100	57.057	ENSSLDG00000000611	helz	88	73.886	Seriola_lalandi_dorsalis
ENSRNOG00000003213	Helz	73	85.294	ENSSARG00000004508	HELZ	73	85.294	Sorex_araneus
ENSRNOG00000003213	Helz	100	81.180	ENSSPUG00000011226	HELZ	100	81.129	Sphenodon_punctatus
ENSRNOG00000003213	Helz	95	71.223	ENSSPAG00000012867	helz	96	61.513	Stegastes_partitus
ENSRNOG00000003213	Helz	100	89.980	ENSSSCG00000017272	HELZ	99	91.716	Sus_scrofa
ENSRNOG00000003213	Helz	100	81.250	ENSTGUG00000004401	HELZ	100	81.199	Taeniopygia_guttata
ENSRNOG00000003213	Helz	92	58.515	ENSTRUG00000000488	helz	99	58.633	Takifugu_rubripes
ENSRNOG00000003213	Helz	100	58.847	ENSTNIG00000014131	helz	100	57.991	Tetraodon_nigroviridis
ENSRNOG00000003213	Helz	80	95.122	ENSTBEG00000003140	HELZ	82	95.122	Tupaia_belangeri
ENSRNOG00000003213	Helz	100	88.211	ENSTTRG00000016778	HELZ	100	88.211	Tursiops_truncatus
ENSRNOG00000003213	Helz	89	90.376	ENSUAMG00000005560	HELZ	99	90.346	Ursus_americanus
ENSRNOG00000003213	Helz	100	88.917	ENSUMAG00000018753	HELZ	99	91.409	Ursus_maritimus
ENSRNOG00000003213	Helz	96	88.907	ENSVPAG00000001848	HELZ	100	88.818	Vicugna_pacos
ENSRNOG00000003213	Helz	100	89.929	ENSVVUG00000006563	HELZ	100	89.980	Vulpes_vulpes
ENSRNOG00000003213	Helz	100	73.506	ENSXETG00000015395	helz	100	72.939	Xenopus_tropicalis
ENSRNOG00000003213	Helz	97	70.070	ENSXMAG00000006535	helz	100	58.135	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005829	cytosol	21873635.	IBA	Component
GO:0035194	posttranscriptional gene silencing by RNA	21873635.	IBA	Process
GO:0043186	P granule	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function