EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003377 (Gene tree)
Gene ID: 302780
Gene Symbol: Rbm31y
Alias: LOC302780|RGD1562219
Full Name: RNA binding motif 31%2C Y-linked
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 1950 bases
Position: chrX:98093714-98095663
Accession: 1562219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000066307	RRM_1	PF00076.22	6e-25	1	2
ENSRNOP00000066307	RRM_1	PF00076.22	6e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000004491	-	1950	XM_001066404	ENSRNOP00000066307	565 (aa)	XP_001066404	M0R9X3

Gene Model

Click here to download ENSRNOG00000003377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003377	Rbm31y	72	48.475	ENSFDAG00000002891	-	76	48.475	Fukomys_damarensis
ENSRNOG00000003377	Rbm31y	94	76.316	MGP_CAROLIEiJ_G0033376	-	94	78.759	Mus_caroli
ENSRNOG00000003377	Rbm31y	100	81.770	ENSMUSG00000095365	Rbm31y	100	81.770	Mus_musculus
ENSRNOG00000003377	Rbm31y	100	79.646	MGP_PahariEiJ_G0031916	-	100	81.947	Mus_pahari
ENSRNOG00000003377	Rbm31y	100	76.814	MGP_SPRETEiJ_G0034541	-	100	79.292	Mus_spretus
ENSRNOG00000003377	Rbm31y	56	61.135	ENSSSCG00000012473	-	86	61.135	Sus_scrofa

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005686	U2 snRNP	21873635.	IBA	Component
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component