EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003392 (Gene tree)
Gene ID: 305256
Gene Symbol: Grsf1
Alias: LOC305256
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 16463 bases
Position: chr14:21039990-21056452
Accession: 1310858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000068892	RRM_1	PF00076.22	2e-23	1	1
ENSRNOP00000004551	RRM_1	PF00076.22	5.7e-23	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000004551	-	2694	XM_006250775	ENSRNOP00000004551	479 (aa)	XP_006250837	F1LRK4
ENSRNOT00000086571	-	2599	XM_017599178	ENSRNOP00000068892	381 (aa)	XP_017454667	A0A0G2JTY6

Gene Model

Click here to download ENSRNOG00000003392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000003392	Grsf1	70	65.333	ENSRNOG00000003399	Hnrnph1	60	64.474
ENSRNOG00000003392	Grsf1	70	64.000	ENSRNOG00000011661	Hnrnph2	60	63.158
ENSRNOG00000003392	Grsf1	67	67.532	ENSRNOG00000048193	Hnrnph3	79	42.238
ENSRNOG00000003392	Grsf1	88	42.033	ENSRNOG00000014562	Hnrnpf	87	42.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003392	Grsf1	100	90.208	ENSG00000132463	GRSF1	98	97.297	Homo_sapiens
ENSRNOG00000003392	Grsf1	95	93.352	ENSAMEG00000005896	GRSF1	100	93.094	Ailuropoda_melanoleuca
ENSRNOG00000003392	Grsf1	94	71.229	ENSACAG00000012921	GRSF1	91	61.077	Anolis_carolinensis
ENSRNOG00000003392	Grsf1	100	91.441	ENSANAG00000022114	GRSF1	98	94.595	Aotus_nancymaae
ENSRNOG00000003392	Grsf1	100	92.100	ENSBTAG00000008577	GRSF1	99	94.183	Bos_taurus
ENSRNOG00000003392	Grsf1	100	91.023	ENSCJAG00000014477	GRSF1	98	94.595	Callithrix_jacchus
ENSRNOG00000003392	Grsf1	87	94.306	ENSCAFG00000002922	GRSF1	100	94.306	Canis_familiaris
ENSRNOG00000003392	Grsf1	100	91.511	ENSCAFG00020027060	GRSF1	100	97.619	Canis_lupus_dingo
ENSRNOG00000003392	Grsf1	100	92.083	ENSCHIG00000021580	GRSF1	100	92.083	Capra_hircus
ENSRNOG00000003392	Grsf1	97	75.741	ENSTSYG00000028860	-	99	77.222	Carlito_syrichta
ENSRNOG00000003392	Grsf1	99	90.526	ENSTSYG00000008487	-	100	94.025	Carlito_syrichta
ENSRNOG00000003392	Grsf1	87	88.312	ENSCAPG00000000156	GRSF1	100	88.312	Cavia_aperea
ENSRNOG00000003392	Grsf1	95	88.089	ENSCPOG00000011662	GRSF1	100	88.089	Cavia_porcellus
ENSRNOG00000003392	Grsf1	100	90.188	ENSCCAG00000028735	-	100	90.188	Cebus_capucinus
ENSRNOG00000003392	Grsf1	87	79.923	ENSCCAG00000024189	-	87	76.277	Cebus_capucinus
ENSRNOG00000003392	Grsf1	100	91.441	ENSCATG00000035808	GRSF1	99	92.903	Cercocebus_atys
ENSRNOG00000003392	Grsf1	95	88.643	ENSCLAG00000003057	GRSF1	100	88.643	Chinchilla_lanigera
ENSRNOG00000003392	Grsf1	100	91.023	ENSCSAG00000004856	GRSF1	100	91.023	Chlorocebus_sabaeus
ENSRNOG00000003392	Grsf1	95	70.442	ENSCPBG00000019502	GRSF1	86	66.528	Chrysemys_picta_bellii
ENSRNOG00000003392	Grsf1	87	92.903	ENSCANG00000037992	GRSF1	100	92.767	Colobus_angolensis_palliatus
ENSRNOG00000003392	Grsf1	100	92.872	ENSCGRG00001019953	Grsf1	99	95.014	Cricetulus_griseus_chok1gshd
ENSRNOG00000003392	Grsf1	95	95.014	ENSCGRG00000005357	Grsf1	100	95.014	Cricetulus_griseus_crigri
ENSRNOG00000003392	Grsf1	95	95.568	ENSDORG00000015145	Grsf1	100	96.350	Dipodomys_ordii
ENSRNOG00000003392	Grsf1	91	92.464	ENSETEG00000013786	GRSF1	100	92.464	Echinops_telfairi
ENSRNOG00000003392	Grsf1	100	91.458	ENSEASG00005016685	GRSF1	94	91.250	Equus_asinus_asinus
ENSRNOG00000003392	Grsf1	100	91.649	ENSECAG00000024208	GRSF1	94	91.649	Equus_caballus
ENSRNOG00000003392	Grsf1	99	41.799	ENSELUG00000011613	-	95	41.799	Esox_lucius
ENSRNOG00000003392	Grsf1	100	92.902	ENSFCAG00000007270	GRSF1	100	92.902	Felis_catus
ENSRNOG00000003392	Grsf1	88	55.457	ENSFALG00000008394	GRSF1	98	55.457	Ficedula_albicollis
ENSRNOG00000003392	Grsf1	73	89.051	ENSFDAG00000008167	-	100	89.051	Fukomys_damarensis
ENSRNOG00000003392	Grsf1	88	51.335	ENSGALG00000031160	GRSF1	77	49.072	Gallus_gallus
ENSRNOG00000003392	Grsf1	95	71.429	ENSGAGG00000006013	GRSF1	99	66.189	Gopherus_agassizii
ENSRNOG00000003392	Grsf1	87	91.509	ENSGGOG00000014852	-	100	91.509	Gorilla_gorilla
ENSRNOG00000003392	Grsf1	100	83.299	ENSHGLG00000000661	GRSF1	100	87.812	Heterocephalus_glaber_female
ENSRNOG00000003392	Grsf1	95	87.812	ENSHGLG00100005974	GRSF1	100	92.701	Heterocephalus_glaber_male
ENSRNOG00000003392	Grsf1	99	91.339	ENSSTOG00000011569	GRSF1	100	97.674	Ictidomys_tridecemlineatus
ENSRNOG00000003392	Grsf1	93	90.435	ENSJJAG00000005325	Grsf1	100	93.431	Jaculus_jaculus
ENSRNOG00000003392	Grsf1	93	52.825	ENSLACG00000009507	GRSF1	97	52.825	Latimeria_chalumnae
ENSRNOG00000003392	Grsf1	92	47.009	ENSLOCG00000011589	GRSF1	77	47.009	Lepisosteus_oculatus
ENSRNOG00000003392	Grsf1	100	89.876	ENSLAFG00000017032	-	100	90.083	Loxodonta_africana
ENSRNOG00000003392	Grsf1	100	91.441	ENSMFAG00000037346	GRSF1	99	92.903	Macaca_fascicularis
ENSRNOG00000003392	Grsf1	100	91.441	ENSMMUG00000000380	GRSF1	99	93.182	Macaca_mulatta
ENSRNOG00000003392	Grsf1	100	85.177	ENSMNEG00000023162	GRSF1	100	95.238	Macaca_nemestrina
ENSRNOG00000003392	Grsf1	95	92.798	ENSMLEG00000007180	GRSF1	99	92.903	Mandrillus_leucophaeus
ENSRNOG00000003392	Grsf1	88	52.226	ENSMGAG00000009940	GRSF1	98	52.226	Meleagris_gallopavo
ENSRNOG00000003392	Grsf1	100	91.232	ENSMICG00000005385	GRSF1	99	92.521	Microcebus_murinus
ENSRNOG00000003392	Grsf1	73	94.161	ENSMOCG00000012769	-	100	94.161	Microtus_ochrogaster
ENSRNOG00000003392	Grsf1	100	80.041	ENSMODG00000019088	GRSF1	90	80.206	Monodelphis_domestica
ENSRNOG00000003392	Grsf1	100	96.451	MGP_CAROLIEiJ_G0027377	Grsf1	100	98.540	Mus_caroli
ENSRNOG00000003392	Grsf1	100	96.660	ENSMUSG00000044221	Grsf1	100	98.540	Mus_musculus
ENSRNOG00000003392	Grsf1	100	94.990	MGP_PahariEiJ_G0017155	Grsf1	100	97.810	Mus_pahari
ENSRNOG00000003392	Grsf1	100	96.242	MGP_SPRETEiJ_G0028374	Grsf1	100	96.242	Mus_spretus
ENSRNOG00000003392	Grsf1	95	93.352	ENSMPUG00000009499	GRSF1	97	92.623	Mustela_putorius_furo
ENSRNOG00000003392	Grsf1	95	91.758	ENSMLUG00000028158	GRSF1	100	91.507	Myotis_lucifugus
ENSRNOG00000003392	Grsf1	73	94.891	ENSNGAG00000022132	-	100	94.891	Nannospalax_galili
ENSRNOG00000003392	Grsf1	94	91.586	ENSNLEG00000007721	-	99	91.290	Nomascus_leucogenys
ENSRNOG00000003392	Grsf1	94	71.788	ENSMEUG00000015942	GRSF1	99	71.788	Notamacropus_eugenii
ENSRNOG00000003392	Grsf1	93	89.000	ENSOPRG00000010148	-	78	89.000	Ochotona_princeps
ENSRNOG00000003392	Grsf1	100	84.760	ENSODEG00000001826	-	100	84.760	Octodon_degus
ENSRNOG00000003392	Grsf1	95	76.454	ENSODEG00000004897	-	100	76.454	Octodon_degus
ENSRNOG00000003392	Grsf1	90	76.901	ENSODEG00000010775	-	100	76.901	Octodon_degus
ENSRNOG00000003392	Grsf1	88	63.008	ENSOANG00000013696	-	100	63.008	Ornithorhynchus_anatinus
ENSRNOG00000003392	Grsf1	96	93.956	ENSOCUG00000010029	GRSF1	100	80.842	Oryctolagus_cuniculus
ENSRNOG00000003392	Grsf1	97	80.707	ENSOGAG00000026370	-	99	71.247	Otolemur_garnettii
ENSRNOG00000003392	Grsf1	95	90.934	ENSOGAG00000000141	-	100	90.685	Otolemur_garnettii
ENSRNOG00000003392	Grsf1	95	93.681	ENSOARG00000011898	GRSF1	100	93.425	Ovis_aries
ENSRNOG00000003392	Grsf1	87	91.935	ENSPPAG00000042456	-	100	91.824	Pan_paniscus
ENSRNOG00000003392	Grsf1	100	92.902	ENSPPRG00000022913	GRSF1	100	92.902	Panthera_pardus
ENSRNOG00000003392	Grsf1	96	93.151	ENSPTIG00000008060	GRSF1	99	93.629	Panthera_tigris_altaica
ENSRNOG00000003392	Grsf1	98	89.429	ENSPTRG00000016136	GRSF1	99	91.935	Pan_troglodytes
ENSRNOG00000003392	Grsf1	100	91.023	ENSPANG00000018597	GRSF1	99	92.258	Papio_anubis
ENSRNOG00000003392	Grsf1	93	74.500	ENSPSIG00000014267	-	96	74.500	Pelodiscus_sinensis
ENSRNOG00000003392	Grsf1	95	95.568	ENSPEMG00000012814	Grsf1	99	95.568	Peromyscus_maniculatus_bairdii
ENSRNOG00000003392	Grsf1	100	79.626	ENSPCIG00000000627	GRSF1	100	79.626	Phascolarctos_cinereus
ENSRNOG00000003392	Grsf1	100	76.923	ENSPPYG00000014812	GRSF1	100	77.547	Pongo_abelii
ENSRNOG00000003392	Grsf1	95	92.798	ENSPCAG00000013949	GRSF1	100	84.778	Procavia_capensis
ENSRNOG00000003392	Grsf1	95	94.183	ENSPVAG00000004338	GRSF1	100	86.221	Pteropus_vampyrus
ENSRNOG00000003392	Grsf1	100	91.441	ENSRBIG00000036494	GRSF1	99	92.903	Rhinopithecus_bieti
ENSRNOG00000003392	Grsf1	100	91.649	ENSRROG00000035735	GRSF1	99	93.226	Rhinopithecus_roxellana
ENSRNOG00000003392	Grsf1	87	92.857	ENSSBOG00000032141	GRSF1	100	65.204	Saimiri_boliviensis_boliviensis
ENSRNOG00000003392	Grsf1	99	81.316	ENSSHAG00000018365	GRSF1	98	82.850	Sarcophilus_harrisii
ENSRNOG00000003392	Grsf1	87	92.857	ENSSARG00000011681	GRSF1	100	92.857	Sorex_araneus
ENSRNOG00000003392	Grsf1	98	57.051	ENSSPUG00000007576	GRSF1	99	57.783	Sphenodon_punctatus
ENSRNOG00000003392	Grsf1	100	92.484	ENSSSCG00000008940	GRSF1	100	92.484	Sus_scrofa
ENSRNOG00000003392	Grsf1	90	54.755	ENSTGUG00000001644	GRSF1	99	54.755	Taeniopygia_guttata
ENSRNOG00000003392	Grsf1	87	94.156	ENSTBEG00000010173	GRSF1	100	94.156	Tupaia_belangeri
ENSRNOG00000003392	Grsf1	95	88.643	ENSTTRG00000008405	GRSF1	97	88.451	Tursiops_truncatus
ENSRNOG00000003392	Grsf1	93	94.208	ENSUAMG00000008901	GRSF1	93	94.208	Ursus_americanus
ENSRNOG00000003392	Grsf1	96	93.425	ENSUMAG00000003757	GRSF1	88	93.425	Ursus_maritimus
ENSRNOG00000003392	Grsf1	95	81.163	ENSVPAG00000011889	GRSF1	100	81.163	Vicugna_pacos
ENSRNOG00000003392	Grsf1	90	93.605	ENSVVUG00000004150	GRSF1	100	93.605	Vulpes_vulpes
ENSRNOG00000003392	Grsf1	94	52.044	ENSXETG00000013850	grsf1	99	52.044	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0009952	anterior/posterior pattern specification	-	IEA	Process
GO:0009952	anterior/posterior pattern specification	-	ISO	Process
GO:0016331	morphogenesis of embryonic epithelium	-	IEA	Process
GO:0016331	morphogenesis of embryonic epithelium	-	ISO	Process
GO:0035770	ribonucleoprotein granule	-	IEA	Component
GO:0035770	ribonucleoprotein granule	-	ISO	Component
GO:0042645	mitochondrial nucleoid	-	IEA	Component
GO:0042645	mitochondrial nucleoid	-	ISO	Component