EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003424 (Gene tree)
Gene ID: 282826
Gene Symbol: Elac2
Alias: -
Full Name: elaC ribonuclease Z 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 22788 bases
Position: chr10:51478378-51501165
Accession: 628882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000004722	Lactamase_B_4	PF13691.6	1.3e-15	1	1
ENSRNOP00000004722	Lactamase_B	PF00753.27	1.8e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000004722	-	2919	-	ENSRNOP00000004722	827 (aa)	-	G3V6F5

Gene Model

Click here to download ENSRNOG00000003424's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003424	Elac2	100	81.894	ENSG00000006744	ELAC2	98	85.714	Homo_sapiens
ENSRNOG00000003424	Elac2	88	61.295	ENSAPOG00000002563	elac2	92	59.787	Acanthochromis_polyacanthus
ENSRNOG00000003424	Elac2	100	78.204	ENSAMEG00000010418	ELAC2	100	77.964	Ailuropoda_melanoleuca
ENSRNOG00000003424	Elac2	90	61.682	ENSAOCG00000003756	elac2	93	59.975	Amphiprion_ocellaris
ENSRNOG00000003424	Elac2	90	61.682	ENSAPEG00000019425	elac2	91	59.774	Amphiprion_percula
ENSRNOG00000003424	Elac2	92	59.975	ENSATEG00000020251	elac2	92	60.075	Anabas_testudineus
ENSRNOG00000003424	Elac2	98	67.836	ENSACAG00000017398	ELAC2	98	67.676	Anolis_carolinensis
ENSRNOG00000003424	Elac2	100	83.094	ENSANAG00000036642	ELAC2	100	83.094	Aotus_nancymaae
ENSRNOG00000003424	Elac2	90	61.008	ENSACLG00000020349	elac2	93	60.881	Astatotilapia_calliptera
ENSRNOG00000003424	Elac2	100	79.493	ENSBTAG00000021939	ELAC2	100	79.493	Bos_taurus
ENSRNOG00000003424	Elac2	100	82.974	ENSCJAG00000004542	ELAC2	100	83.094	Callithrix_jacchus
ENSRNOG00000003424	Elac2	98	82.945	ENSCAFG00000017886	ELAC2	100	82.410	Canis_familiaris
ENSRNOG00000003424	Elac2	98	81.595	ENSCAFG00020000574	ELAC2	100	81.084	Canis_lupus_dingo
ENSRNOG00000003424	Elac2	100	80.024	ENSCHIG00000025992	ELAC2	100	80.024	Capra_hircus
ENSRNOG00000003424	Elac2	100	85.870	ENSTSYG00000005202	ELAC2	100	85.870	Carlito_syrichta
ENSRNOG00000003424	Elac2	99	83.433	ENSCPOG00000009098	ELAC2	99	83.433	Cavia_porcellus
ENSRNOG00000003424	Elac2	100	82.614	ENSCCAG00000036307	ELAC2	100	82.614	Cebus_capucinus
ENSRNOG00000003424	Elac2	100	82.734	ENSCATG00000030564	ELAC2	100	82.734	Cercocebus_atys
ENSRNOG00000003424	Elac2	99	84.053	ENSCLAG00000007156	ELAC2	100	84.053	Chinchilla_lanigera
ENSRNOG00000003424	Elac2	100	81.415	ENSCSAG00000009057	ELAC2	100	81.415	Chlorocebus_sabaeus
ENSRNOG00000003424	Elac2	96	69.554	ENSCPBG00000027769	ELAC2	98	69.361	Chrysemys_picta_bellii
ENSRNOG00000003424	Elac2	100	82.254	ENSCANG00000040743	ELAC2	100	82.254	Colobus_angolensis_palliatus
ENSRNOG00000003424	Elac2	99	89.238	ENSCGRG00001023086	Elac2	97	89.238	Cricetulus_griseus_chok1gshd
ENSRNOG00000003424	Elac2	90	83.356	ENSCGRG00000011564	Elac2	99	83.356	Cricetulus_griseus_crigri
ENSRNOG00000003424	Elac2	95	56.234	ENSCSEG00000020630	elac2	95	56.234	Cynoglossus_semilaevis
ENSRNOG00000003424	Elac2	91	60.370	ENSCVAG00000003649	elac2	97	58.333	Cyprinodon_variegatus
ENSRNOG00000003424	Elac2	93	58.915	ENSDARG00000034060	elac2	95	59.241	Danio_rerio
ENSRNOG00000003424	Elac2	100	73.430	ENSDNOG00000004242	ELAC2	99	74.455	Dasypus_novemcinctus
ENSRNOG00000003424	Elac2	90	86.620	ENSDORG00000005592	Elac2	96	86.620	Dipodomys_ordii
ENSRNOG00000003424	Elac2	96	33.135	FBgn0028426	JhI-1	99	33.133	Drosophila_melanogaster
ENSRNOG00000003424	Elac2	95	46.760	ENSEBUG00000011361	elac2	92	46.633	Eptatretus_burgeri
ENSRNOG00000003424	Elac2	100	85.042	ENSEASG00005016922	ELAC2	100	85.042	Equus_asinus_asinus
ENSRNOG00000003424	Elac2	91	61.039	ENSELUG00000018265	elac2	94	61.118	Esox_lucius
ENSRNOG00000003424	Elac2	100	80.700	ENSFCAG00000008407	ELAC2	100	80.700	Felis_catus
ENSRNOG00000003424	Elac2	99	83.575	ENSFDAG00000010293	ELAC2	100	83.575	Fukomys_damarensis
ENSRNOG00000003424	Elac2	90	60.239	ENSFHEG00000015744	elac2	93	58.801	Fundulus_heteroclitus
ENSRNOG00000003424	Elac2	82	67.105	ENSGMOG00000008574	elac2	96	65.789	Gadus_morhua
ENSRNOG00000003424	Elac2	99	61.290	ENSGALG00000001036	ELAC2	99	60.812	Gallus_gallus
ENSRNOG00000003424	Elac2	91	59.577	ENSGAFG00000005456	elac2	75	74.561	Gambusia_affinis
ENSRNOG00000003424	Elac2	90	60.160	ENSGACG00000014454	elac2	99	58.220	Gasterosteus_aculeatus
ENSRNOG00000003424	Elac2	96	68.080	ENSGAGG00000017133	ELAC2	97	68.491	Gopherus_agassizii
ENSRNOG00000003424	Elac2	100	82.374	ENSGGOG00000015850	ELAC2	100	82.374	Gorilla_gorilla
ENSRNOG00000003424	Elac2	90	60.875	ENSHBUG00000017777	elac2	93	58.591	Haplochromis_burtoni
ENSRNOG00000003424	Elac2	99	82.515	ENSHGLG00000005718	ELAC2	100	82.515	Heterocephalus_glaber_female
ENSRNOG00000003424	Elac2	99	82.275	ENSHGLG00100003619	ELAC2	100	82.275	Heterocephalus_glaber_male
ENSRNOG00000003424	Elac2	90	60.695	ENSHCOG00000006972	elac2	95	61.248	Hippocampus_comes
ENSRNOG00000003424	Elac2	91	62.302	ENSIPUG00000022303	elac2	95	60.173	Ictalurus_punctatus
ENSRNOG00000003424	Elac2	99	86.077	ENSSTOG00000006680	ELAC2	100	86.077	Ictidomys_tridecemlineatus
ENSRNOG00000003424	Elac2	52	58.102	ENSKMAG00000019598	elac2	99	55.306	Kryptolebias_marmoratus
ENSRNOG00000003424	Elac2	91	61.873	ENSLBEG00000027524	elac2	92	60.247	Labrus_bergylta
ENSRNOG00000003424	Elac2	97	62.607	ENSLOCG00000012146	elac2	97	63.313	Lepisosteus_oculatus
ENSRNOG00000003424	Elac2	99	81.896	ENSLAFG00000009404	ELAC2	100	81.896	Loxodonta_africana
ENSRNOG00000003424	Elac2	100	82.374	ENSMFAG00000041840	ELAC2	100	82.734	Macaca_fascicularis
ENSRNOG00000003424	Elac2	100	82.374	ENSMMUG00000014450	ELAC2	100	82.734	Macaca_mulatta
ENSRNOG00000003424	Elac2	100	82.134	ENSMNEG00000044872	ELAC2	100	82.494	Macaca_nemestrina
ENSRNOG00000003424	Elac2	90	60.933	ENSMAMG00000019957	elac2	97	57.320	Mastacembelus_armatus
ENSRNOG00000003424	Elac2	90	61.008	ENSMZEG00005000530	elac2	93	58.714	Maylandia_zebra
ENSRNOG00000003424	Elac2	100	90.734	ENSMAUG00000019006	Elac2	100	90.734	Mesocricetus_auratus
ENSRNOG00000003424	Elac2	100	85.386	ENSMICG00000002428	ELAC2	100	85.386	Microcebus_murinus
ENSRNOG00000003424	Elac2	100	91.898	ENSMOCG00000014060	Elac2	100	91.898	Microtus_ochrogaster
ENSRNOG00000003424	Elac2	91	56.133	ENSMMOG00000020227	elac2	97	54.534	Mola_mola
ENSRNOG00000003424	Elac2	98	73.374	ENSMODG00000008064	ELAC2	98	73.374	Monodelphis_domestica
ENSRNOG00000003424	Elac2	98	54.217	ENSMALG00000020125	elac2	95	55.542	Monopterus_albus
ENSRNOG00000003424	Elac2	100	95.647	MGP_CAROLIEiJ_G0016509	Elac2	100	95.320	Mus_caroli
ENSRNOG00000003424	Elac2	100	95.042	ENSMUSG00000020549	Elac2	100	94.680	Mus_musculus
ENSRNOG00000003424	Elac2	100	94.438	MGP_PahariEiJ_G0017638	Elac2	100	94.075	Mus_pahari
ENSRNOG00000003424	Elac2	100	95.163	MGP_SPRETEiJ_G0017346	Elac2	100	94.800	Mus_spretus
ENSRNOG00000003424	Elac2	100	81.588	ENSMPUG00000003608	ELAC2	100	81.588	Mustela_putorius_furo
ENSRNOG00000003424	Elac2	100	87.831	ENSNGAG00000021585	Elac2	100	87.470	Nannospalax_galili
ENSRNOG00000003424	Elac2	84	59.130	ENSNBRG00000010410	elac2	98	59.130	Neolamprologus_brichardi
ENSRNOG00000003424	Elac2	100	80.622	ENSNLEG00000014599	ELAC2	100	80.622	Nomascus_leucogenys
ENSRNOG00000003424	Elac2	63	88.194	ENSMEUG00000000013	ELAC2	65	88.194	Notamacropus_eugenii
ENSRNOG00000003424	Elac2	91	88.715	ENSOPRG00000011156	ELAC2	91	88.715	Ochotona_princeps
ENSRNOG00000003424	Elac2	99	84.625	ENSODEG00000000449	ELAC2	100	84.625	Octodon_degus
ENSRNOG00000003424	Elac2	90	61.671	ENSONIG00000009569	elac2	97	58.838	Oreochromis_niloticus
ENSRNOG00000003424	Elac2	96	82.811	ENSOCUG00000012703	ELAC2	96	82.811	Oryctolagus_cuniculus
ENSRNOG00000003424	Elac2	92	58.344	ENSORLG00000001024	elac2	93	57.319	Oryzias_latipes
ENSRNOG00000003424	Elac2	93	58.056	ENSORLG00015008761	elac2	92	58.032	Oryzias_latipes_hsok
ENSRNOG00000003424	Elac2	90	59.463	ENSOMEG00000015065	elac2	95	57.280	Oryzias_melastigma
ENSRNOG00000003424	Elac2	98	84.108	ENSOGAG00000012628	ELAC2	99	84.108	Otolemur_garnettii
ENSRNOG00000003424	Elac2	91	80.713	ENSOARG00000015747	ELAC2	99	80.305	Ovis_aries
ENSRNOG00000003424	Elac2	100	82.374	ENSPPAG00000011633	ELAC2	100	82.374	Pan_paniscus
ENSRNOG00000003424	Elac2	100	81.205	ENSPPRG00000023801	ELAC2	100	81.205	Panthera_pardus
ENSRNOG00000003424	Elac2	100	82.254	ENSPTRG00000008788	ELAC2	100	82.254	Pan_troglodytes
ENSRNOG00000003424	Elac2	100	82.494	ENSPANG00000023751	ELAC2	100	82.494	Papio_anubis
ENSRNOG00000003424	Elac2	90	60.910	ENSPKIG00000014594	elac2	99	56.824	Paramormyrops_kingsleyae
ENSRNOG00000003424	Elac2	92	52.356	ENSPMGG00000007330	elac2	94	52.430	Periophthalmus_magnuspinnatus
ENSRNOG00000003424	Elac2	100	92.261	ENSPEMG00000001670	Elac2	99	92.261	Peromyscus_maniculatus_bairdii
ENSRNOG00000003424	Elac2	99	71.875	ENSPCIG00000009347	ELAC2	98	71.789	Phascolarctos_cinereus
ENSRNOG00000003424	Elac2	91	59.713	ENSPFOG00000003750	elac2	95	59.463	Poecilia_formosa
ENSRNOG00000003424	Elac2	52	61.163	ENSPLAG00000015161	elac2	93	60.762	Poecilia_latipinna
ENSRNOG00000003424	Elac2	91	59.790	ENSPMEG00000023756	elac2	78	74.561	Poecilia_mexicana
ENSRNOG00000003424	Elac2	91	59.658	ENSPREG00000003349	elac2	91	59.407	Poecilia_reticulata
ENSRNOG00000003424	Elac2	100	79.137	ENSPPYG00000007997	ELAC2	100	79.137	Pongo_abelii
ENSRNOG00000003424	Elac2	100	85.266	ENSPCOG00000014581	ELAC2	100	85.266	Propithecus_coquereli
ENSRNOG00000003424	Elac2	78	82.123	ENSPVAG00000017570	ELAC2	80	82.123	Pteropus_vampyrus
ENSRNOG00000003424	Elac2	90	60.823	ENSPNYG00000010837	elac2	97	56.538	Pundamilia_nyererei
ENSRNOG00000003424	Elac2	91	62.269	ENSPNAG00000018524	elac2	95	60.442	Pygocentrus_nattereri
ENSRNOG00000003424	Elac2	100	82.014	ENSRBIG00000021596	ELAC2	100	82.014	Rhinopithecus_bieti
ENSRNOG00000003424	Elac2	100	82.254	ENSRROG00000033226	ELAC2	100	82.254	Rhinopithecus_roxellana
ENSRNOG00000003424	Elac2	100	82.134	ENSSBOG00000016993	ELAC2	100	82.134	Saimiri_boliviensis_boliviensis
ENSRNOG00000003424	Elac2	94	59.821	ENSSFOG00015004103	elac2	90	59.975	Scleropages_formosus
ENSRNOG00000003424	Elac2	91	59.867	ENSSMAG00000012868	elac2	94	59.873	Scophthalmus_maximus
ENSRNOG00000003424	Elac2	93	60.858	ENSSDUG00000023129	elac2	91	60.858	Seriola_dumerili
ENSRNOG00000003424	Elac2	91	61.008	ENSSLDG00000005645	elac2	91	61.118	Seriola_lalandi_dorsalis
ENSRNOG00000003424	Elac2	90	59.358	ENSSPAG00000005674	elac2	91	59.413	Stegastes_partitus
ENSRNOG00000003424	Elac2	100	79.688	ENSSSCG00000028465	ELAC2	100	79.688	Sus_scrofa
ENSRNOG00000003424	Elac2	90	61.415	ENSTRUG00000004076	elac2	94	61.680	Takifugu_rubripes
ENSRNOG00000003424	Elac2	90	60.294	ENSTNIG00000011271	elac2	98	59.949	Tetraodon_nigroviridis
ENSRNOG00000003424	Elac2	100	76.024	ENSTTRG00000002898	ELAC2	100	75.663	Tursiops_truncatus
ENSRNOG00000003424	Elac2	89	73.819	ENSUMAG00000021393	ELAC2	91	73.684	Ursus_maritimus
ENSRNOG00000003424	Elac2	98	79.487	ENSVVUG00000029905	ELAC2	100	79.023	Vulpes_vulpes
ENSRNOG00000003424	Elac2	93	58.809	ENSXETG00000012596	elac2	100	58.933	Xenopus_tropicalis
ENSRNOG00000003424	Elac2	52	60.648	ENSXCOG00000004282	elac2	93	60.714	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0004549	tRNA-specific ribonuclease activity	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005739	mitochondrion	-	ISS	Component
GO:0008150	biological_process	-	ND	Process
GO:0042645	mitochondrial nucleoid	-	IEA	Component
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	21873635.	IBA	Process
GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	-	IEA	Process
GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	-	ISO	Process
GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	-	ISS	Process