EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003434 (Gene tree)
Gene ID: 304833
Gene Symbol: Trove2
Alias: LOC304833|Ssa2|Trove2
Full Name: TROVE domain family%2C member 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 20971 bases
Position: chr13:60546912-60567882
Accession: 1305083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000004701	TROVE	PF05731.11	1.4e-60	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000004701	-	3717	-	ENSRNOP00000004701	538 (aa)	-	D3ZRN5

Gene Model

Click here to download ENSRNOG00000003434's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003434	Trove2	100	89.591	ENSG00000116747	RO60	100	89.591	Homo_sapiens
ENSRNOG00000003434	Trove2	98	53.497	ENSAPOG00000015903	trove2	99	53.497	Acanthochromis_polyacanthus
ENSRNOG00000003434	Trove2	100	89.591	ENSAMEG00000015881	TROVE2	100	89.591	Ailuropoda_melanoleuca
ENSRNOG00000003434	Trove2	100	38.376	ENSACIG00000002080	-	100	38.376	Amphilophus_citrinellus
ENSRNOG00000003434	Trove2	99	48.134	ENSACIG00000010149	trove2	99	48.582	Amphilophus_citrinellus
ENSRNOG00000003434	Trove2	98	53.308	ENSAOCG00000000143	trove2	99	53.308	Amphiprion_ocellaris
ENSRNOG00000003434	Trove2	98	53.119	ENSAPEG00000003310	trove2	99	53.119	Amphiprion_percula
ENSRNOG00000003434	Trove2	98	53.409	ENSATEG00000021195	trove2	100	52.865	Anabas_testudineus
ENSRNOG00000003434	Trove2	100	80.297	ENSAPLG00000003121	TROVE2	100	80.297	Anas_platyrhynchos
ENSRNOG00000003434	Trove2	100	79.554	ENSACAG00000008263	TROVE2	100	79.554	Anolis_carolinensis
ENSRNOG00000003434	Trove2	100	89.219	ENSANAG00000027305	TROVE2	100	89.219	Aotus_nancymaae
ENSRNOG00000003434	Trove2	98	46.703	ENSACLG00000012217	trove2	98	46.703	Astatotilapia_calliptera
ENSRNOG00000003434	Trove2	100	53.959	ENSAMXG00000002118	trove2	100	53.959	Astyanax_mexicanus
ENSRNOG00000003434	Trove2	100	90.892	ENSBTAG00000013812	TROVE2	63	90.892	Bos_taurus
ENSRNOG00000003434	Trove2	98	36.116	WBGene00004405	rop-1	91	35.945	Caenorhabditis_elegans
ENSRNOG00000003434	Trove2	100	88.848	ENSCJAG00000008566	TROVE2	100	88.848	Callithrix_jacchus
ENSRNOG00000003434	Trove2	100	89.777	ENSCAFG00000010552	TROVE2	97	89.777	Canis_familiaris
ENSRNOG00000003434	Trove2	99	89.831	ENSCAFG00020004457	TROVE2	100	89.831	Canis_lupus_dingo
ENSRNOG00000003434	Trove2	100	90.149	ENSCHIG00000018260	TROVE2	100	90.149	Capra_hircus
ENSRNOG00000003434	Trove2	100	87.918	ENSTSYG00000004227	TROVE2	100	87.918	Carlito_syrichta
ENSRNOG00000003434	Trove2	91	81.818	ENSCAPG00000009733	TROVE2	100	81.818	Cavia_aperea
ENSRNOG00000003434	Trove2	100	84.944	ENSCPOG00000000669	TROVE2	100	84.944	Cavia_porcellus
ENSRNOG00000003434	Trove2	87	91.000	ENSCCAG00000027978	TROVE2	100	91.000	Cebus_capucinus
ENSRNOG00000003434	Trove2	100	89.033	ENSCATG00000027732	TROVE2	100	89.033	Cercocebus_atys
ENSRNOG00000003434	Trove2	100	89.777	ENSCLAG00000016391	TROVE2	100	89.777	Chinchilla_lanigera
ENSRNOG00000003434	Trove2	100	89.405	ENSCSAG00000013402	TROVE2	100	89.405	Chlorocebus_sabaeus
ENSRNOG00000003434	Trove2	86	89.637	ENSCHOG00000009571	TROVE2	86	89.637	Choloepus_hoffmanni
ENSRNOG00000003434	Trove2	100	83.457	ENSCPBG00000010558	TROVE2	100	83.457	Chrysemys_picta_bellii
ENSRNOG00000003434	Trove2	69	32.368	ENSCING00000013754	-	93	32.368	Ciona_intestinalis
ENSRNOG00000003434	Trove2	58	32.803	ENSCSAVG00000008738	-	99	32.803	Ciona_savignyi
ENSRNOG00000003434	Trove2	100	89.219	ENSCANG00000041293	TROVE2	100	89.219	Colobus_angolensis_palliatus
ENSRNOG00000003434	Trove2	100	93.309	ENSCGRG00001016925	Trove2	100	93.309	Cricetulus_griseus_chok1gshd
ENSRNOG00000003434	Trove2	100	93.309	ENSCGRG00000003396	Trove2	100	93.309	Cricetulus_griseus_crigri
ENSRNOG00000003434	Trove2	100	52.495	ENSCSEG00000009989	trove2	100	52.495	Cynoglossus_semilaevis
ENSRNOG00000003434	Trove2	100	51.017	ENSCVAG00000008160	trove2	100	51.017	Cyprinodon_variegatus
ENSRNOG00000003434	Trove2	94	54.438	ENSDARG00000089225	trove2	94	54.438	Danio_rerio
ENSRNOG00000003434	Trove2	100	86.989	ENSDNOG00000002157	TROVE2	100	86.989	Dasypus_novemcinctus
ENSRNOG00000003434	Trove2	100	89.591	ENSDORG00000006152	Trove2	100	89.591	Dipodomys_ordii
ENSRNOG00000003434	Trove2	64	86.047	ENSETEG00000018261	TROVE2	100	86.047	Echinops_telfairi
ENSRNOG00000003434	Trove2	100	87.732	ENSEASG00005003388	TROVE2	100	87.732	Equus_asinus_asinus
ENSRNOG00000003434	Trove2	100	88.104	ENSECAG00000018653	TROVE2	100	88.104	Equus_caballus
ENSRNOG00000003434	Trove2	100	85.900	ENSEEUG00000014190	TROVE2	100	85.900	Erinaceus_europaeus
ENSRNOG00000003434	Trove2	98	54.253	ENSELUG00000004473	trove2	98	54.253	Esox_lucius
ENSRNOG00000003434	Trove2	100	90.149	ENSFCAG00000010161	TROVE2	100	90.149	Felis_catus
ENSRNOG00000003434	Trove2	100	76.580	ENSFALG00000002913	TROVE2	100	76.580	Ficedula_albicollis
ENSRNOG00000003434	Trove2	100	89.777	ENSFDAG00000015923	TROVE2	100	89.777	Fukomys_damarensis
ENSRNOG00000003434	Trove2	100	51.756	ENSFHEG00000016128	trove2	100	51.756	Fundulus_heteroclitus
ENSRNOG00000003434	Trove2	100	79.182	ENSGALG00000002504	TROVE2	100	79.182	Gallus_gallus
ENSRNOG00000003434	Trove2	100	51.386	ENSGAFG00000011806	trove2	100	51.386	Gambusia_affinis
ENSRNOG00000003434	Trove2	100	82.528	ENSGAGG00000017742	TROVE2	100	82.528	Gopherus_agassizii
ENSRNOG00000003434	Trove2	100	89.591	ENSGGOG00000034815	TROVE2	100	89.591	Gorilla_gorilla
ENSRNOG00000003434	Trove2	98	48.204	ENSHBUG00000014208	trove2	99	48.204	Haplochromis_burtoni
ENSRNOG00000003434	Trove2	100	89.963	ENSHGLG00000003152	TROVE2	100	89.963	Heterocephalus_glaber_female
ENSRNOG00000003434	Trove2	100	89.963	ENSHGLG00100010586	TROVE2	100	89.963	Heterocephalus_glaber_male
ENSRNOG00000003434	Trove2	100	50.000	ENSHCOG00000004153	trove2	100	50.000	Hippocampus_comes
ENSRNOG00000003434	Trove2	98	49.153	ENSIPUG00000011780	trove2	99	49.153	Ictalurus_punctatus
ENSRNOG00000003434	Trove2	100	82.156	ENSSTOG00000012307	TROVE2	100	82.156	Ictidomys_tridecemlineatus
ENSRNOG00000003434	Trove2	100	89.777	ENSJJAG00000019489	Trove2	100	89.777	Jaculus_jaculus
ENSRNOG00000003434	Trove2	98	51.229	ENSKMAG00000004951	trove2	99	51.229	Kryptolebias_marmoratus
ENSRNOG00000003434	Trove2	100	53.875	ENSLBEG00000009672	trove2	100	53.875	Labrus_bergylta
ENSRNOG00000003434	Trove2	100	74.721	ENSLACG00000007822	TROVE2	99	74.721	Latimeria_chalumnae
ENSRNOG00000003434	Trove2	99	71.536	ENSLOCG00000007384	trove2	99	71.536	Lepisosteus_oculatus
ENSRNOG00000003434	Trove2	100	88.848	ENSLAFG00000014808	TROVE2	100	88.848	Loxodonta_africana
ENSRNOG00000003434	Trove2	100	89.219	ENSMFAG00000016020	TROVE2	100	89.219	Macaca_fascicularis
ENSRNOG00000003434	Trove2	98	88.994	ENSMMUG00000022643	TROVE2	100	88.213	Macaca_mulatta
ENSRNOG00000003434	Trove2	100	89.405	ENSMNEG00000039348	TROVE2	100	89.405	Macaca_nemestrina
ENSRNOG00000003434	Trove2	100	89.033	ENSMLEG00000040042	TROVE2	100	89.033	Mandrillus_leucophaeus
ENSRNOG00000003434	Trove2	98	51.136	ENSMAMG00000002004	trove2	100	50.647	Mastacembelus_armatus
ENSRNOG00000003434	Trove2	98	46.886	ENSMZEG00005008107	trove2	98	46.886	Maylandia_zebra
ENSRNOG00000003434	Trove2	100	78.810	ENSMGAG00000005429	TROVE2	100	78.810	Meleagris_gallopavo
ENSRNOG00000003434	Trove2	100	93.494	ENSMAUG00000008125	Trove2	100	93.494	Mesocricetus_auratus
ENSRNOG00000003434	Trove2	100	90.149	ENSMICG00000011506	TROVE2	100	90.149	Microcebus_murinus
ENSRNOG00000003434	Trove2	100	91.078	ENSMOCG00000021175	Trove2	100	91.078	Microtus_ochrogaster
ENSRNOG00000003434	Trove2	100	52.495	ENSMMOG00000017049	trove2	100	52.495	Mola_mola
ENSRNOG00000003434	Trove2	100	83.829	ENSMODG00000012203	TROVE2	100	83.829	Monodelphis_domestica
ENSRNOG00000003434	Trove2	100	53.420	ENSMALG00000007367	trove2	100	53.420	Monopterus_albus
ENSRNOG00000003434	Trove2	100	95.911	MGP_CAROLIEiJ_G0014676	Trove2	100	95.911	Mus_caroli
ENSRNOG00000003434	Trove2	100	93.494	ENSMUSG00000018199	Trove2	100	93.494	Mus_musculus
ENSRNOG00000003434	Trove2	100	95.353	MGP_PahariEiJ_G0027912	Trove2	91	95.353	Mus_pahari
ENSRNOG00000003434	Trove2	100	94.424	MGP_SPRETEiJ_G0015483	Trove2	100	94.424	Mus_spretus
ENSRNOG00000003434	Trove2	100	89.405	ENSMPUG00000004631	TROVE2	100	89.405	Mustela_putorius_furo
ENSRNOG00000003434	Trove2	99	88.246	ENSMLUG00000001442	TROVE2	99	88.246	Myotis_lucifugus
ENSRNOG00000003434	Trove2	100	89.591	ENSNGAG00000015898	Trove2	100	89.591	Nannospalax_galili
ENSRNOG00000003434	Trove2	98	48.582	ENSNBRG00000005311	trove2	97	48.582	Neolamprologus_brichardi
ENSRNOG00000003434	Trove2	100	89.219	ENSNLEG00000018048	TROVE2	100	89.219	Nomascus_leucogenys
ENSRNOG00000003434	Trove2	75	90.000	ENSMEUG00000005618	-	76	90.000	Notamacropus_eugenii
ENSRNOG00000003434	Trove2	75	72.070	ENSOPRG00000017247	TROVE2	100	72.070	Ochotona_princeps
ENSRNOG00000003434	Trove2	100	89.591	ENSODEG00000010468	TROVE2	100	89.591	Octodon_degus
ENSRNOG00000003434	Trove2	98	47.802	ENSONIG00000018579	trove2	99	47.802	Oreochromis_niloticus
ENSRNOG00000003434	Trove2	100	84.230	ENSOANG00000002961	TROVE2	100	84.230	Ornithorhynchus_anatinus
ENSRNOG00000003434	Trove2	100	86.617	ENSOCUG00000012814	TROVE2	100	86.617	Oryctolagus_cuniculus
ENSRNOG00000003434	Trove2	99	49.251	ENSORLG00000010951	trove2	100	49.813	Oryzias_latipes
ENSRNOG00000003434	Trove2	99	49.438	ENSORLG00020009759	trove2	100	50.000	Oryzias_latipes_hni
ENSRNOG00000003434	Trove2	97	50.189	ENSORLG00015004497	trove2	99	50.755	Oryzias_latipes_hsok
ENSRNOG00000003434	Trove2	100	48.998	ENSOMEG00000010440	trove2	100	48.998	Oryzias_melastigma
ENSRNOG00000003434	Trove2	98	89.205	ENSOGAG00000032047	TROVE2	99	89.205	Otolemur_garnettii
ENSRNOG00000003434	Trove2	100	90.335	ENSOARG00000009462	TROVE2	96	90.335	Ovis_aries
ENSRNOG00000003434	Trove2	100	89.405	ENSPPAG00000043846	TROVE2	100	89.405	Pan_paniscus
ENSRNOG00000003434	Trove2	100	90.149	ENSPPRG00000017233	TROVE2	100	90.149	Panthera_pardus
ENSRNOG00000003434	Trove2	100	89.591	ENSPTIG00000015535	TROVE2	100	89.591	Panthera_tigris_altaica
ENSRNOG00000003434	Trove2	100	89.405	ENSPTRG00000001794	TROVE2	100	89.405	Pan_troglodytes
ENSRNOG00000003434	Trove2	100	89.033	ENSPANG00000000341	TROVE2	100	89.033	Papio_anubis
ENSRNOG00000003434	Trove2	95	58.090	ENSPKIG00000018217	trove2	98	58.090	Paramormyrops_kingsleyae
ENSRNOG00000003434	Trove2	100	81.784	ENSPSIG00000009877	TROVE2	100	81.784	Pelodiscus_sinensis
ENSRNOG00000003434	Trove2	100	92.007	ENSPEMG00000001419	Trove2	100	92.007	Peromyscus_maniculatus_bairdii
ENSRNOG00000003434	Trove2	100	83.643	ENSPCIG00000028632	TROVE2	100	83.643	Phascolarctos_cinereus
ENSRNOG00000003434	Trove2	100	50.647	ENSPFOG00000006974	trove2	100	50.647	Poecilia_formosa
ENSRNOG00000003434	Trove2	100	51.017	ENSPLAG00000009027	trove2	100	51.017	Poecilia_latipinna
ENSRNOG00000003434	Trove2	100	50.832	ENSPMEG00000015081	trove2	99	50.832	Poecilia_mexicana
ENSRNOG00000003434	Trove2	100	51.017	ENSPREG00000005674	trove2	100	51.017	Poecilia_reticulata
ENSRNOG00000003434	Trove2	100	89.405	ENSPPYG00000000397	TROVE2	100	89.405	Pongo_abelii
ENSRNOG00000003434	Trove2	100	87.546	ENSPCAG00000003959	TROVE2	100	87.546	Procavia_capensis
ENSRNOG00000003434	Trove2	100	89.591	ENSPCOG00000015951	-	100	89.591	Propithecus_coquereli
ENSRNOG00000003434	Trove2	91	85.626	ENSPVAG00000001182	TROVE2	100	85.626	Pteropus_vampyrus
ENSRNOG00000003434	Trove2	98	46.703	ENSPNYG00000020148	trove2	98	46.703	Pundamilia_nyererei
ENSRNOG00000003434	Trove2	100	53.690	ENSPNAG00000024223	trove2	100	53.690	Pygocentrus_nattereri
ENSRNOG00000003434	Trove2	100	89.405	ENSRBIG00000030073	TROVE2	100	89.405	Rhinopithecus_bieti
ENSRNOG00000003434	Trove2	100	89.405	ENSRROG00000034428	TROVE2	100	89.405	Rhinopithecus_roxellana
ENSRNOG00000003434	Trove2	100	89.405	ENSSBOG00000024070	TROVE2	100	89.405	Saimiri_boliviensis_boliviensis
ENSRNOG00000003434	Trove2	100	83.829	ENSSHAG00000013205	TROVE2	100	83.829	Sarcophilus_harrisii
ENSRNOG00000003434	Trove2	98	62.311	ENSSFOG00015011990	trove2	97	62.311	Scleropages_formosus
ENSRNOG00000003434	Trove2	98	52.930	ENSSMAG00000009058	trove2	98	52.919	Scophthalmus_maximus
ENSRNOG00000003434	Trove2	100	52.768	ENSSDUG00000009083	trove2	100	52.768	Seriola_dumerili
ENSRNOG00000003434	Trove2	100	52.768	ENSSLDG00000019857	trove2	100	52.768	Seriola_lalandi_dorsalis
ENSRNOG00000003434	Trove2	100	86.989	ENSSARG00000009347	TROVE2	100	86.989	Sorex_araneus
ENSRNOG00000003434	Trove2	100	82.342	ENSSPUG00000014304	TROVE2	100	82.342	Sphenodon_punctatus
ENSRNOG00000003434	Trove2	98	53.861	ENSSPAG00000003171	trove2	99	53.861	Stegastes_partitus
ENSRNOG00000003434	Trove2	100	88.290	ENSSSCG00000032055	TROVE2	100	88.290	Sus_scrofa
ENSRNOG00000003434	Trove2	96	79.767	ENSTGUG00000004126	TROVE2	100	79.767	Taeniopygia_guttata
ENSRNOG00000003434	Trove2	100	51.296	ENSTRUG00000009656	trove2	100	51.296	Takifugu_rubripes
ENSRNOG00000003434	Trove2	100	52.778	ENSTNIG00000007802	trove2	100	52.778	Tetraodon_nigroviridis
ENSRNOG00000003434	Trove2	75	87.755	ENSTBEG00000006806	TROVE2	83	87.755	Tupaia_belangeri
ENSRNOG00000003434	Trove2	99	88.827	ENSTTRG00000009291	TROVE2	100	88.827	Tursiops_truncatus
ENSRNOG00000003434	Trove2	100	90.335	ENSUAMG00000013365	TROVE2	100	90.335	Ursus_americanus
ENSRNOG00000003434	Trove2	100	90.520	ENSUMAG00000020464	TROVE2	100	90.520	Ursus_maritimus
ENSRNOG00000003434	Trove2	85	94.000	ENSVPAG00000010303	TROVE2	85	94.000	Vicugna_pacos
ENSRNOG00000003434	Trove2	96	89.494	ENSVVUG00000013405	TROVE2	72	89.494	Vulpes_vulpes
ENSRNOG00000003434	Trove2	100	75.465	ENSXETG00000017224	trove2	100	75.465	Xenopus_tropicalis
ENSRNOG00000003434	Trove2	100	46.350	ENSXCOG00000007527	trove2	98	47.736	Xiphophorus_couchianus
ENSRNOG00000003434	Trove2	100	51.201	ENSXMAG00000004825	trove2	100	51.201	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002520	immune system development	-	IEA	Process
GO:0002520	immune system development	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0007224	smoothened signaling pathway	-	IEA	Process
GO:0007224	smoothened signaling pathway	-	ISO	Process
GO:0009411	response to UV	-	IEA	Process
GO:0009411	response to UV	-	ISO	Process
GO:0010468	regulation of gene expression	-	IEA	Process
GO:0030620	U2 snRNA binding	-	IEA	Function
GO:0030620	U2 snRNA binding	-	ISO	Function
GO:0035457	cellular response to interferon-alpha	-	IEA	Process
GO:0060271	cilium assembly	-	IEA	Process
GO:0060271	cilium assembly	-	ISO	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component
GO:1990904	ribonucleoprotein complex	-	ISO	Component