EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003504 (Gene tree)
Gene ID: 364974
Gene Symbol: Rnaseh2a
Alias: LOC364974
Full Name: ribonuclease H2%2C subunit A
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 9693 bases
Position: chr19:26074987-26084679
Accession: 1307248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000049148	RNase_HII	PF01351.18	4.3e-53	1	1
ENSRNOP00000070694	RNase_HII	PF01351.18	4.3e-53	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000046181	-	1653	XM_017601331	ENSRNOP00000049148	301 (aa)	XP_017456820	Q5U209
ENSRNOT00000083159	-	1183	XM_008772414	ENSRNOP00000070694	301 (aa)	XP_008770636	Q5U209

Gene Model

Click here to download ENSRNOG00000003504's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003504	Rnaseh2a	100	85.099	ENSG00000104889	RNASEH2A	99	94.286	Homo_sapiens
ENSRNOG00000003504	Rnaseh2a	100	60.000	ENSAPOG00000004101	rnaseh2a	100	60.000	Acanthochromis_polyacanthus
ENSRNOG00000003504	Rnaseh2a	100	84.053	ENSAMEG00000012323	RNASEH2A	100	84.053	Ailuropoda_melanoleuca
ENSRNOG00000003504	Rnaseh2a	85	65.882	ENSACIG00000002658	rnaseh2a	100	65.882	Amphilophus_citrinellus
ENSRNOG00000003504	Rnaseh2a	100	58.387	ENSAOCG00000009217	rnaseh2a	100	58.387	Amphiprion_ocellaris
ENSRNOG00000003504	Rnaseh2a	100	58.387	ENSAPEG00000022937	rnaseh2a	100	58.387	Amphiprion_percula
ENSRNOG00000003504	Rnaseh2a	100	60.000	ENSATEG00000000908	rnaseh2a	100	60.000	Anabas_testudineus
ENSRNOG00000003504	Rnaseh2a	100	65.116	ENSACAG00000003338	RNASEH2A	100	65.116	Anolis_carolinensis
ENSRNOG00000003504	Rnaseh2a	100	63.844	ENSANAG00000037932	RNASEH2A	100	63.844	Aotus_nancymaae
ENSRNOG00000003504	Rnaseh2a	100	59.677	ENSACLG00000009169	rnaseh2a	100	59.677	Astatotilapia_calliptera
ENSRNOG00000003504	Rnaseh2a	100	53.465	ENSAMXG00000000436	rnaseh2a	100	53.465	Astyanax_mexicanus
ENSRNOG00000003504	Rnaseh2a	100	84.385	ENSBTAG00000009661	RNASEH2A	100	84.385	Bos_taurus
ENSRNOG00000003504	Rnaseh2a	89	51.471	WBGene00004383	rnh-2	91	51.471	Caenorhabditis_elegans
ENSRNOG00000003504	Rnaseh2a	100	83.775	ENSCJAG00000004873	RNASEH2A	100	83.775	Callithrix_jacchus
ENSRNOG00000003504	Rnaseh2a	100	83.056	ENSCAFG00000017159	RNASEH2A	100	83.056	Canis_familiaris
ENSRNOG00000003504	Rnaseh2a	100	83.056	ENSCAFG00020005190	RNASEH2A	60	83.056	Canis_lupus_dingo
ENSRNOG00000003504	Rnaseh2a	100	84.385	ENSCHIG00000014460	RNASEH2A	100	84.385	Capra_hircus
ENSRNOG00000003504	Rnaseh2a	100	85.762	ENSTSYG00000025418	RNASEH2A	100	85.762	Carlito_syrichta
ENSRNOG00000003504	Rnaseh2a	64	77.202	ENSCAPG00000003411	RNASEH2A	100	77.202	Cavia_aperea
ENSRNOG00000003504	Rnaseh2a	100	82.450	ENSCPOG00000038877	RNASEH2A	100	82.450	Cavia_porcellus
ENSRNOG00000003504	Rnaseh2a	100	84.437	ENSCCAG00000030453	RNASEH2A	100	84.437	Cebus_capucinus
ENSRNOG00000003504	Rnaseh2a	100	84.106	ENSCATG00000029609	RNASEH2A	100	84.106	Cercocebus_atys
ENSRNOG00000003504	Rnaseh2a	100	84.437	ENSCLAG00000014930	RNASEH2A	100	84.437	Chinchilla_lanigera
ENSRNOG00000003504	Rnaseh2a	100	83.775	ENSCSAG00000006567	RNASEH2A	100	83.775	Chlorocebus_sabaeus
ENSRNOG00000003504	Rnaseh2a	100	62.791	ENSCPBG00000023909	RNASEH2A	100	62.791	Chrysemys_picta_bellii
ENSRNOG00000003504	Rnaseh2a	100	51.163	ENSCING00000006190	-	100	51.163	Ciona_intestinalis
ENSRNOG00000003504	Rnaseh2a	100	50.831	ENSCSAVG00000010904	-	100	50.831	Ciona_savignyi
ENSRNOG00000003504	Rnaseh2a	100	84.106	ENSCANG00000027433	RNASEH2A	100	84.106	Colobus_angolensis_palliatus
ENSRNOG00000003504	Rnaseh2a	100	93.046	ENSCGRG00001005021	Rnaseh2a	100	93.046	Cricetulus_griseus_chok1gshd
ENSRNOG00000003504	Rnaseh2a	100	93.046	ENSCGRG00000016602	Rnaseh2a	100	93.046	Cricetulus_griseus_crigri
ENSRNOG00000003504	Rnaseh2a	100	60.390	ENSCSEG00000009842	rnaseh2a	100	60.390	Cynoglossus_semilaevis
ENSRNOG00000003504	Rnaseh2a	99	56.522	ENSCVAG00000021203	rnaseh2a	99	56.522	Cyprinodon_variegatus
ENSRNOG00000003504	Rnaseh2a	100	61.489	ENSDARG00000018891	rnaseh2a	100	63.380	Danio_rerio
ENSRNOG00000003504	Rnaseh2a	85	82.558	ENSDNOG00000036532	RNASEH2A	100	82.558	Dasypus_novemcinctus
ENSRNOG00000003504	Rnaseh2a	100	84.718	ENSDORG00000009008	Rnaseh2a	100	84.718	Dipodomys_ordii
ENSRNOG00000003504	Rnaseh2a	96	47.635	FBgn0031252	CG13690	85	47.635	Drosophila_melanogaster
ENSRNOG00000003504	Rnaseh2a	71	72.770	ENSETEG00000001956	-	100	72.770	Echinops_telfairi
ENSRNOG00000003504	Rnaseh2a	97	51.987	ENSEBUG00000003380	rnaseh2a	92	52.318	Eptatretus_burgeri
ENSRNOG00000003504	Rnaseh2a	86	87.692	ENSEASG00005004118	RNASEH2A	94	87.692	Equus_asinus_asinus
ENSRNOG00000003504	Rnaseh2a	100	83.056	ENSECAG00000007013	RNASEH2A	100	83.056	Equus_caballus
ENSRNOG00000003504	Rnaseh2a	100	76.080	ENSEEUG00000008222	RNASEH2A	100	76.080	Erinaceus_europaeus
ENSRNOG00000003504	Rnaseh2a	99	60.726	ENSELUG00000023079	rnaseh2a	100	62.791	Esox_lucius
ENSRNOG00000003504	Rnaseh2a	100	84.053	ENSFCAG00000000474	RNASEH2A	100	84.053	Felis_catus
ENSRNOG00000003504	Rnaseh2a	100	84.768	ENSFDAG00000003595	RNASEH2A	100	84.768	Fukomys_damarensis
ENSRNOG00000003504	Rnaseh2a	100	61.889	ENSFHEG00000007682	rnaseh2a	100	61.889	Fundulus_heteroclitus
ENSRNOG00000003504	Rnaseh2a	100	59.032	ENSGMOG00000005650	rnaseh2a	100	59.032	Gadus_morhua
ENSRNOG00000003504	Rnaseh2a	100	59.603	ENSGALG00000052002	RNASEH2A	73	59.603	Gallus_gallus
ENSRNOG00000003504	Rnaseh2a	99	61.056	ENSGAFG00000009624	rnaseh2a	99	61.056	Gambusia_affinis
ENSRNOG00000003504	Rnaseh2a	100	59.740	ENSGACG00000016019	rnaseh2a	100	59.740	Gasterosteus_aculeatus
ENSRNOG00000003504	Rnaseh2a	100	63.036	ENSGAGG00000013859	RNASEH2A	100	63.036	Gopherus_agassizii
ENSRNOG00000003504	Rnaseh2a	100	85.430	ENSGGOG00000005846	RNASEH2A	100	85.430	Gorilla_gorilla
ENSRNOG00000003504	Rnaseh2a	91	63.345	ENSHBUG00000005267	rnaseh2a	96	63.345	Haplochromis_burtoni
ENSRNOG00000003504	Rnaseh2a	100	83.444	ENSHGLG00000018801	RNASEH2A	100	83.444	Heterocephalus_glaber_female
ENSRNOG00000003504	Rnaseh2a	100	83.775	ENSHGLG00100015773	RNASEH2A	100	83.775	Heterocephalus_glaber_male
ENSRNOG00000003504	Rnaseh2a	100	59.283	ENSHCOG00000016593	rnaseh2a	100	59.283	Hippocampus_comes
ENSRNOG00000003504	Rnaseh2a	100	61.165	ENSIPUG00000024299	rnaseh2a	100	61.165	Ictalurus_punctatus
ENSRNOG00000003504	Rnaseh2a	100	83.056	ENSSTOG00000006224	RNASEH2A	99	86.667	Ictidomys_tridecemlineatus
ENSRNOG00000003504	Rnaseh2a	100	85.430	ENSJJAG00000017547	Rnaseh2a	100	85.430	Jaculus_jaculus
ENSRNOG00000003504	Rnaseh2a	100	61.238	ENSKMAG00000019829	rnaseh2a	100	61.238	Kryptolebias_marmoratus
ENSRNOG00000003504	Rnaseh2a	100	60.129	ENSLBEG00000020494	rnaseh2a	100	60.129	Labrus_bergylta
ENSRNOG00000003504	Rnaseh2a	85	61.176	ENSLACG00000007789	RNASEH2A	99	61.176	Latimeria_chalumnae
ENSRNOG00000003504	Rnaseh2a	100	62.541	ENSLOCG00000007890	rnaseh2a	99	62.541	Lepisosteus_oculatus
ENSRNOG00000003504	Rnaseh2a	100	83.444	ENSLAFG00000015571	RNASEH2A	100	83.444	Loxodonta_africana
ENSRNOG00000003504	Rnaseh2a	100	84.106	ENSMFAG00000002011	RNASEH2A	100	84.106	Macaca_fascicularis
ENSRNOG00000003504	Rnaseh2a	100	83.775	ENSMMUG00000005690	RNASEH2A	100	83.775	Macaca_mulatta
ENSRNOG00000003504	Rnaseh2a	100	83.775	ENSMNEG00000033054	RNASEH2A	100	83.775	Macaca_nemestrina
ENSRNOG00000003504	Rnaseh2a	100	84.106	ENSMLEG00000043654	RNASEH2A	100	84.106	Mandrillus_leucophaeus
ENSRNOG00000003504	Rnaseh2a	100	60.645	ENSMAMG00000003062	rnaseh2a	99	63.380	Mastacembelus_armatus
ENSRNOG00000003504	Rnaseh2a	100	59.032	ENSMZEG00005023857	rnaseh2a	100	59.032	Maylandia_zebra
ENSRNOG00000003504	Rnaseh2a	54	92.073	ENSMAUG00000021740	-	100	92.073	Mesocricetus_auratus
ENSRNOG00000003504	Rnaseh2a	100	85.430	ENSMICG00000016430	RNASEH2A	100	85.430	Microcebus_murinus
ENSRNOG00000003504	Rnaseh2a	100	92.691	ENSMOCG00000017408	Rnaseh2a	100	92.691	Microtus_ochrogaster
ENSRNOG00000003504	Rnaseh2a	85	64.314	ENSMMOG00000008447	rnaseh2a	100	64.314	Mola_mola
ENSRNOG00000003504	Rnaseh2a	100	68.065	ENSMODG00000006997	RNASEH2A	100	68.065	Monodelphis_domestica
ENSRNOG00000003504	Rnaseh2a	100	61.290	ENSMALG00000021607	rnaseh2a	100	62.745	Monopterus_albus
ENSRNOG00000003504	Rnaseh2a	79	96.403	MGP_CAROLIEiJ_G0031319	-	100	100.000	Mus_caroli
ENSRNOG00000003504	Rnaseh2a	100	93.023	ENSMUSG00000052926	Rnaseh2a	100	100.000	Mus_musculus
ENSRNOG00000003504	Rnaseh2a	100	93.355	MGP_PahariEiJ_G0022924	Rnaseh2a	100	100.000	Mus_pahari
ENSRNOG00000003504	Rnaseh2a	100	94.020	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	100.000	Mus_spretus
ENSRNOG00000003504	Rnaseh2a	100	83.056	ENSMPUG00000004586	RNASEH2A	100	83.056	Mustela_putorius_furo
ENSRNOG00000003504	Rnaseh2a	100	84.718	ENSMLUG00000012723	RNASEH2A	100	84.718	Myotis_lucifugus
ENSRNOG00000003504	Rnaseh2a	100	85.714	ENSNGAG00000017988	Rnaseh2a	100	85.714	Nannospalax_galili
ENSRNOG00000003504	Rnaseh2a	100	59.677	ENSNBRG00000018731	rnaseh2a	100	59.677	Neolamprologus_brichardi
ENSRNOG00000003504	Rnaseh2a	100	85.430	ENSNLEG00000012806	RNASEH2A	100	85.430	Nomascus_leucogenys
ENSRNOG00000003504	Rnaseh2a	71	74.178	ENSMEUG00000006001	RNASEH2A	100	74.178	Notamacropus_eugenii
ENSRNOG00000003504	Rnaseh2a	100	68.543	ENSOPRG00000004811	RNASEH2A	100	68.543	Ochotona_princeps
ENSRNOG00000003504	Rnaseh2a	100	83.775	ENSODEG00000009772	RNASEH2A	100	83.775	Octodon_degus
ENSRNOG00000003504	Rnaseh2a	100	59.032	ENSONIG00000018033	rnaseh2a	99	59.032	Oreochromis_niloticus
ENSRNOG00000003504	Rnaseh2a	100	60.784	ENSOANG00000009079	RNASEH2A	100	60.784	Ornithorhynchus_anatinus
ENSRNOG00000003504	Rnaseh2a	100	60.390	ENSORLG00000004042	rnaseh2a	100	60.390	Oryzias_latipes
ENSRNOG00000003504	Rnaseh2a	100	60.390	ENSORLG00020009483	rnaseh2a	100	60.390	Oryzias_latipes_hni
ENSRNOG00000003504	Rnaseh2a	100	60.390	ENSORLG00015007548	rnaseh2a	100	60.390	Oryzias_latipes_hsok
ENSRNOG00000003504	Rnaseh2a	100	59.547	ENSOMEG00000016454	rnaseh2a	98	64.822	Oryzias_melastigma
ENSRNOG00000003504	Rnaseh2a	100	80.795	ENSOGAG00000012214	RNASEH2A	100	80.795	Otolemur_garnettii
ENSRNOG00000003504	Rnaseh2a	100	84.385	ENSOARG00000010721	RNASEH2A	100	84.385	Ovis_aries
ENSRNOG00000003504	Rnaseh2a	100	85.430	ENSPPAG00000028092	RNASEH2A	100	85.430	Pan_paniscus
ENSRNOG00000003504	Rnaseh2a	100	83.721	ENSPPRG00000010585	RNASEH2A	100	83.721	Panthera_pardus
ENSRNOG00000003504	Rnaseh2a	100	83.056	ENSPTIG00000013366	RNASEH2A	100	83.056	Panthera_tigris_altaica
ENSRNOG00000003504	Rnaseh2a	100	84.768	ENSPTRG00000010542	RNASEH2A	100	84.768	Pan_troglodytes
ENSRNOG00000003504	Rnaseh2a	100	84.106	ENSPANG00000034495	RNASEH2A	100	84.106	Papio_anubis
ENSRNOG00000003504	Rnaseh2a	100	62.541	ENSPKIG00000009756	rnaseh2a	100	62.541	Paramormyrops_kingsleyae
ENSRNOG00000003504	Rnaseh2a	65	59.694	ENSPSIG00000012039	RNASEH2A	100	59.694	Pelodiscus_sinensis
ENSRNOG00000003504	Rnaseh2a	85	65.490	ENSPMGG00000023392	rnaseh2a	100	65.490	Periophthalmus_magnuspinnatus
ENSRNOG00000003504	Rnaseh2a	100	93.046	ENSPEMG00000018009	Rnaseh2a	100	93.046	Peromyscus_maniculatus_bairdii
ENSRNOG00000003504	Rnaseh2a	98	61.130	ENSPMAG00000009060	rnaseh2a	98	61.513	Petromyzon_marinus
ENSRNOG00000003504	Rnaseh2a	100	67.419	ENSPCIG00000014119	RNASEH2A	100	67.419	Phascolarctos_cinereus
ENSRNOG00000003504	Rnaseh2a	100	61.238	ENSPFOG00000012627	rnaseh2a	100	59.740	Poecilia_formosa
ENSRNOG00000003504	Rnaseh2a	85	66.667	ENSPLAG00000015901	rnaseh2a	100	66.667	Poecilia_latipinna
ENSRNOG00000003504	Rnaseh2a	67	57.212	ENSPLAG00000018723	-	90	57.212	Poecilia_latipinna
ENSRNOG00000003504	Rnaseh2a	85	67.059	ENSPMEG00000000647	rnaseh2a	100	67.059	Poecilia_mexicana
ENSRNOG00000003504	Rnaseh2a	67	57.692	ENSPMEG00000009032	-	93	57.692	Poecilia_mexicana
ENSRNOG00000003504	Rnaseh2a	100	60.465	ENSPREG00000015015	rnaseh2a	100	60.465	Poecilia_reticulata
ENSRNOG00000003504	Rnaseh2a	100	84.488	ENSPPYG00000009608	RNASEH2A	100	84.488	Pongo_abelii
ENSRNOG00000003504	Rnaseh2a	100	83.721	ENSPCAG00000015319	RNASEH2A	100	83.721	Procavia_capensis
ENSRNOG00000003504	Rnaseh2a	100	85.099	ENSPCOG00000003686	RNASEH2A	100	85.099	Propithecus_coquereli
ENSRNOG00000003504	Rnaseh2a	100	68.106	ENSPVAG00000014703	RNASEH2A	100	68.106	Pteropus_vampyrus
ENSRNOG00000003504	Rnaseh2a	100	55.911	ENSPNYG00000023986	rnaseh2a	100	55.911	Pundamilia_nyererei
ENSRNOG00000003504	Rnaseh2a	100	60.714	ENSPNAG00000021017	rnaseh2a	100	60.714	Pygocentrus_nattereri
ENSRNOG00000003504	Rnaseh2a	100	84.437	ENSRBIG00000023554	RNASEH2A	100	84.437	Rhinopithecus_bieti
ENSRNOG00000003504	Rnaseh2a	100	84.437	ENSRROG00000043799	RNASEH2A	100	84.437	Rhinopithecus_roxellana
ENSRNOG00000003504	Rnaseh2a	80	43.969	YNL072W	RNH201	81	43.969	Saccharomyces_cerevisiae
ENSRNOG00000003504	Rnaseh2a	100	85.099	ENSSBOG00000033164	RNASEH2A	100	85.099	Saimiri_boliviensis_boliviensis
ENSRNOG00000003504	Rnaseh2a	100	67.097	ENSSHAG00000015552	RNASEH2A	100	67.097	Sarcophilus_harrisii
ENSRNOG00000003504	Rnaseh2a	100	62.215	ENSSFOG00015009692	rnaseh2a	100	62.215	Scleropages_formosus
ENSRNOG00000003504	Rnaseh2a	100	58.387	ENSSMAG00000013986	rnaseh2a	100	58.387	Scophthalmus_maximus
ENSRNOG00000003504	Rnaseh2a	88	64.906	ENSSDUG00000005280	rnaseh2a	90	64.906	Seriola_dumerili
ENSRNOG00000003504	Rnaseh2a	100	59.355	ENSSLDG00000023766	rnaseh2a	100	59.355	Seriola_lalandi_dorsalis
ENSRNOG00000003504	Rnaseh2a	100	58.065	ENSSPAG00000012769	rnaseh2a	100	58.065	Stegastes_partitus
ENSRNOG00000003504	Rnaseh2a	100	84.818	ENSSSCG00000013737	RNASEH2A	100	84.818	Sus_scrofa
ENSRNOG00000003504	Rnaseh2a	100	58.199	ENSTRUG00000000049	rnaseh2a	100	58.199	Takifugu_rubripes
ENSRNOG00000003504	Rnaseh2a	100	57.508	ENSTNIG00000004533	rnaseh2a	99	57.508	Tetraodon_nigroviridis
ENSRNOG00000003504	Rnaseh2a	71	88.732	ENSTTRG00000003592	RNASEH2A	100	88.732	Tursiops_truncatus
ENSRNOG00000003504	Rnaseh2a	100	83.721	ENSUAMG00000019593	RNASEH2A	99	91.429	Ursus_americanus
ENSRNOG00000003504	Rnaseh2a	77	88.362	ENSUMAG00000006254	-	73	88.362	Ursus_maritimus
ENSRNOG00000003504	Rnaseh2a	98	61.794	ENSXETG00000004762	rnaseh2a	98	61.794	Xenopus_tropicalis
ENSRNOG00000003504	Rnaseh2a	100	60.912	ENSXCOG00000013485	rnaseh2a	99	62.857	Xiphophorus_couchianus
ENSRNOG00000003504	Rnaseh2a	100	60.912	ENSXMAG00000006953	rnaseh2a	100	60.912	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	21873635.	IBA	Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	-	ISO	Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	-	ISS	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006298	mismatch repair	21873635.	IBA	Process
GO:0006298	mismatch repair	-	ISO	Process
GO:0006401	RNA catabolic process	-	ISO	Process
GO:0006401	RNA catabolic process	-	ISS	Process
GO:0032299	ribonuclease H2 complex	21873635.	IBA	Component
GO:0032299	ribonuclease H2 complex	-	ISO	Component
GO:0032299	ribonuclease H2 complex	-	ISS	Component
GO:0043137	DNA replication, removal of RNA primer	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process