EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003599 (Gene tree)
Gene ID: 305258
Gene Symbol: Utp3
Alias: Crlz1|LOC305258
Full Name: UTP3%2C small subunit processome component
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 1653 bases
Position: chr14:21154000-21155652
Accession: 1308540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000004787	Sas10_Utp3	PF04000.15	4.5e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000004787	-	1653	-	ENSRNOP00000004787	470 (aa)	-	Q6AXX4

Gene Model

Click here to download ENSRNOG00000003599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003599	Utp3	100	82.463	ENSG00000132467	UTP3	100	84.134	Homo_sapiens
ENSRNOG00000003599	Utp3	93	54.425	ENSAPOG00000018006	utp3	93	54.967	Acanthochromis_polyacanthus
ENSRNOG00000003599	Utp3	100	82.390	ENSAMEG00000019540	UTP3	100	82.809	Ailuropoda_melanoleuca
ENSRNOG00000003599	Utp3	93	48.858	ENSACIG00000010913	utp3	92	52.719	Amphilophus_citrinellus
ENSRNOG00000003599	Utp3	93	54.286	ENSAOCG00000016134	utp3	93	55.338	Amphiprion_ocellaris
ENSRNOG00000003599	Utp3	93	53.626	ENSAPEG00000003914	utp3	93	54.684	Amphiprion_percula
ENSRNOG00000003599	Utp3	93	50.885	ENSATEG00000024940	utp3	99	51.092	Anabas_testudineus
ENSRNOG00000003599	Utp3	77	54.617	ENSACAG00000012860	UTP3	99	52.331	Anolis_carolinensis
ENSRNOG00000003599	Utp3	100	83.299	ENSANAG00000031723	UTP3	100	82.881	Aotus_nancymaae
ENSRNOG00000003599	Utp3	97	51.440	ENSACLG00000015170	utp3	99	51.745	Astatotilapia_calliptera
ENSRNOG00000003599	Utp3	74	55.313	ENSAMXG00000032941	utp3	89	55.313	Astyanax_mexicanus
ENSRNOG00000003599	Utp3	100	81.172	ENSBTAG00000009310	UTP3	100	81.172	Bos_taurus
ENSRNOG00000003599	Utp3	100	82.573	ENSCJAG00000042824	UTP3	100	82.365	Callithrix_jacchus
ENSRNOG00000003599	Utp3	100	82.390	ENSCAFG00000002913	UTP3	100	81.971	Canis_familiaris
ENSRNOG00000003599	Utp3	100	77.244	ENSCAFG00020027071	UTP3	100	76.618	Canis_lupus_dingo
ENSRNOG00000003599	Utp3	100	81.381	ENSCHIG00000002276	UTP3	100	81.381	Capra_hircus
ENSRNOG00000003599	Utp3	99	82.166	ENSCPOG00000005869	UTP3	99	80.851	Cavia_porcellus
ENSRNOG00000003599	Utp3	100	84.937	ENSCCAG00000032341	UTP3	100	84.310	Cebus_capucinus
ENSRNOG00000003599	Utp3	100	84.486	ENSCATG00000016403	UTP3	100	84.277	Cercocebus_atys
ENSRNOG00000003599	Utp3	97	83.261	ENSCLAG00000017606	UTP3	100	84.000	Chinchilla_lanigera
ENSRNOG00000003599	Utp3	100	82.952	ENSCSAG00000000420	UTP3	100	82.952	Chlorocebus_sabaeus
ENSRNOG00000003599	Utp3	99	53.550	ENSCPBG00000019489	UTP3	99	54.049	Chrysemys_picta_bellii
ENSRNOG00000003599	Utp3	100	34.232	ENSCING00000007582	-	100	36.175	Ciona_intestinalis
ENSRNOG00000003599	Utp3	93	33.921	ENSCSAVG00000010608	-	94	35.412	Ciona_savignyi
ENSRNOG00000003599	Utp3	100	80.833	ENSCANG00000016915	UTP3	100	82.708	Colobus_angolensis_palliatus
ENSRNOG00000003599	Utp3	100	90.105	ENSCGRG00001001299	Utp3	100	90.105	Cricetulus_griseus_chok1gshd
ENSRNOG00000003599	Utp3	100	89.895	ENSCGRG00000019120	Utp3	100	89.895	Cricetulus_griseus_crigri
ENSRNOG00000003599	Utp3	86	45.610	ENSCSEG00000021698	utp3	89	49.153	Cynoglossus_semilaevis
ENSRNOG00000003599	Utp3	93	50.439	ENSCVAG00000011971	utp3	93	51.316	Cyprinodon_variegatus
ENSRNOG00000003599	Utp3	93	52.018	ENSDARG00000056720	utp3	93	50.559	Danio_rerio
ENSRNOG00000003599	Utp3	100	80.842	ENSDNOG00000002962	UTP3	100	80.421	Dasypus_novemcinctus
ENSRNOG00000003599	Utp3	100	81.933	ENSDORG00000023913	Utp3	100	82.353	Dipodomys_ordii
ENSRNOG00000003599	Utp3	74	38.719	FBgn0029755	Sas10	80	40.278	Drosophila_melanogaster
ENSRNOG00000003599	Utp3	93	38.661	ENSEBUG00000015686	utp3	93	38.661	Eptatretus_burgeri
ENSRNOG00000003599	Utp3	100	82.600	ENSEASG00005016702	UTP3	100	83.891	Equus_asinus_asinus
ENSRNOG00000003599	Utp3	100	82.600	ENSECAG00000005387	UTP3	100	83.891	Equus_caballus
ENSRNOG00000003599	Utp3	93	50.667	ENSELUG00000001527	utp3	94	52.643	Esox_lucius
ENSRNOG00000003599	Utp3	100	81.913	ENSFCAG00000007268	UTP3	100	82.121	Felis_catus
ENSRNOG00000003599	Utp3	78	54.315	ENSFALG00000014560	UTP3	77	56.383	Ficedula_albicollis
ENSRNOG00000003599	Utp3	91	51.333	ENSFHEG00000018565	utp3	86	51.786	Fundulus_heteroclitus
ENSRNOG00000003599	Utp3	84	49.626	ENSGMOG00000001824	utp3	92	52.044	Gadus_morhua
ENSRNOG00000003599	Utp3	74	58.537	ENSGALG00000047103	UTP3	69	59.079	Gallus_gallus
ENSRNOG00000003599	Utp3	93	50.000	ENSGAFG00000012330	utp3	93	51.535	Gambusia_affinis
ENSRNOG00000003599	Utp3	77	56.183	ENSGACG00000007417	utp3	90	56.720	Gasterosteus_aculeatus
ENSRNOG00000003599	Utp3	99	53.441	ENSGAGG00000003975	UTP3	99	52.429	Gopherus_agassizii
ENSRNOG00000003599	Utp3	100	82.636	ENSGGOG00000025335	UTP3	100	84.728	Gorilla_gorilla
ENSRNOG00000003599	Utp3	97	51.852	ENSHBUG00000003276	utp3	99	50.509	Haplochromis_burtoni
ENSRNOG00000003599	Utp3	97	82.675	ENSHGLG00000020163	UTP3	100	81.953	Heterocephalus_glaber_female
ENSRNOG00000003599	Utp3	97	82.456	ENSHGLG00100020125	UTP3	100	81.741	Heterocephalus_glaber_male
ENSRNOG00000003599	Utp3	78	53.421	ENSHCOG00000020540	utp3	80	55.096	Hippocampus_comes
ENSRNOG00000003599	Utp3	93	50.780	ENSIPUG00000014510	Utp3	93	51.448	Ictalurus_punctatus
ENSRNOG00000003599	Utp3	100	80.462	ENSSTOG00000029126	UTP3	100	81.092	Ictidomys_tridecemlineatus
ENSRNOG00000003599	Utp3	100	80.973	ENSJJAG00000014891	Utp3	100	80.042	Jaculus_jaculus
ENSRNOG00000003599	Utp3	93	51.860	ENSKMAG00000004879	utp3	93	53.201	Kryptolebias_marmoratus
ENSRNOG00000003599	Utp3	93	50.893	ENSLBEG00000024055	utp3	93	53.333	Labrus_bergylta
ENSRNOG00000003599	Utp3	93	50.325	ENSLACG00000009975	utp3	94	49.574	Latimeria_chalumnae
ENSRNOG00000003599	Utp3	82	54.863	ENSLOCG00000001449	utp3	97	58.516	Lepisosteus_oculatus
ENSRNOG00000003599	Utp3	100	75.527	ENSLAFG00000017017	UTP3	100	74.895	Loxodonta_africana
ENSRNOG00000003599	Utp3	100	81.172	ENSMFAG00000013579	UTP3	100	83.264	Macaca_fascicularis
ENSRNOG00000003599	Utp3	100	80.962	ENSMMUG00000014229	UTP3	100	83.054	Macaca_mulatta
ENSRNOG00000003599	Utp3	100	81.172	ENSMNEG00000005112	UTP3	100	83.264	Macaca_nemestrina
ENSRNOG00000003599	Utp3	100	81.799	ENSMLEG00000022236	UTP3	100	83.891	Mandrillus_leucophaeus
ENSRNOG00000003599	Utp3	93	53.642	ENSMAMG00000015467	utp3	93	53.744	Mastacembelus_armatus
ENSRNOG00000003599	Utp3	97	51.440	ENSMZEG00005014455	utp3	99	51.745	Maylandia_zebra
ENSRNOG00000003599	Utp3	72	47.514	ENSMGAG00000009998	UTP3	88	48.571	Meleagris_gallopavo
ENSRNOG00000003599	Utp3	100	88.559	ENSMAUG00000017935	Utp3	100	88.983	Mesocricetus_auratus
ENSRNOG00000003599	Utp3	100	86.864	ENSMOCG00000005434	Utp3	100	86.864	Microtus_ochrogaster
ENSRNOG00000003599	Utp3	88	51.174	ENSMMOG00000010804	utp3	80	54.839	Mola_mola
ENSRNOG00000003599	Utp3	93	70.510	ENSMODG00000019084	UTP3	99	68.951	Monodelphis_domestica
ENSRNOG00000003599	Utp3	92	49.891	ENSMALG00000003443	utp3	93	51.087	Monopterus_albus
ENSRNOG00000003599	Utp3	100	91.949	MGP_CAROLIEiJ_G0027375	Utp3	100	91.102	Mus_caroli
ENSRNOG00000003599	Utp3	100	91.915	ENSMUSG00000070697	Utp3	100	91.915	Mus_musculus
ENSRNOG00000003599	Utp3	74	92.000	MGP_PahariEiJ_G0017153	-	75	93.143	Mus_pahari
ENSRNOG00000003599	Utp3	100	92.553	MGP_SPRETEiJ_G0028372	Utp3	100	92.553	Mus_spretus
ENSRNOG00000003599	Utp3	100	81.551	ENSMPUG00000019074	UTP3	100	80.922	Mustela_putorius_furo
ENSRNOG00000003599	Utp3	100	84.034	ENSMLUG00000003722	UTP3	100	84.244	Myotis_lucifugus
ENSRNOG00000003599	Utp3	100	87.021	ENSNGAG00000012521	Utp3	100	86.809	Nannospalax_galili
ENSRNOG00000003599	Utp3	97	51.646	ENSNBRG00000020374	utp3	99	50.713	Neolamprologus_brichardi
ENSRNOG00000003599	Utp3	100	82.218	ENSNLEG00000018563	UTP3	100	84.100	Nomascus_leucogenys
ENSRNOG00000003599	Utp3	97	82.237	ENSODEG00000018723	UTP3	100	80.042	Octodon_degus
ENSRNOG00000003599	Utp3	97	52.381	ENSONIG00000003918	utp3	99	51.230	Oreochromis_niloticus
ENSRNOG00000003599	Utp3	75	91.892	ENSOANG00000013694	-	100	91.892	Ornithorhynchus_anatinus
ENSRNOG00000003599	Utp3	100	78.737	ENSOCUG00000010003	UTP3	100	78.737	Oryctolagus_cuniculus
ENSRNOG00000003599	Utp3	97	49.895	ENSORLG00000004019	utp3	99	49.791	Oryzias_latipes
ENSRNOG00000003599	Utp3	97	49.487	ENSORLG00020020306	utp3	99	48.240	Oryzias_latipes_hni
ENSRNOG00000003599	Utp3	93	52.434	ENSORLG00015016052	utp3	93	52.203	Oryzias_latipes_hsok
ENSRNOG00000003599	Utp3	93	53.097	ENSOMEG00000022073	utp3	93	53.097	Oryzias_melastigma
ENSRNOG00000003599	Utp3	100	81.971	ENSOGAG00000012878	UTP3	100	81.971	Otolemur_garnettii
ENSRNOG00000003599	Utp3	100	81.590	ENSOARG00000007800	UTP3	100	81.590	Ovis_aries
ENSRNOG00000003599	Utp3	100	82.463	ENSPPAG00000019684	UTP3	100	84.342	Pan_paniscus
ENSRNOG00000003599	Utp3	100	83.193	ENSPPRG00000015468	UTP3	100	83.403	Panthera_pardus
ENSRNOG00000003599	Utp3	100	82.983	ENSPTIG00000006703	UTP3	100	83.193	Panthera_tigris_altaica
ENSRNOG00000003599	Utp3	100	83.891	ENSPANG00000008263	UTP3	100	83.682	Papio_anubis
ENSRNOG00000003599	Utp3	93	48.451	ENSPKIG00000012883	utp3	93	49.336	Paramormyrops_kingsleyae
ENSRNOG00000003599	Utp3	77	59.791	ENSPSIG00000000105	UTP3	59	61.370	Pelodiscus_sinensis
ENSRNOG00000003599	Utp3	93	50.794	ENSPMGG00000023527	utp3	95	49.552	Periophthalmus_magnuspinnatus
ENSRNOG00000003599	Utp3	100	91.083	ENSPEMG00000019223	Utp3	100	91.083	Peromyscus_maniculatus_bairdii
ENSRNOG00000003599	Utp3	94	50.531	ENSPFOG00000014528	utp3	96	52.229	Poecilia_formosa
ENSRNOG00000003599	Utp3	94	48.620	ENSPLAG00000005600	utp3	96	51.380	Poecilia_latipinna
ENSRNOG00000003599	Utp3	94	49.257	ENSPMEG00000019359	utp3	96	51.380	Poecilia_mexicana
ENSRNOG00000003599	Utp3	94	49.465	ENSPREG00000005341	utp3	96	51.606	Poecilia_reticulata
ENSRNOG00000003599	Utp3	100	84.342	ENSPPYG00000014810	UTP3	100	83.925	Pongo_abelii
ENSRNOG00000003599	Utp3	100	79.210	ENSPCAG00000012879	UTP3	100	79.002	Procavia_capensis
ENSRNOG00000003599	Utp3	100	80.376	ENSPVAG00000004333	UTP3	100	80.793	Pteropus_vampyrus
ENSRNOG00000003599	Utp3	93	51.242	ENSPNYG00000017771	utp3	93	50.794	Pundamilia_nyererei
ENSRNOG00000003599	Utp3	93	50.766	ENSPNAG00000000182	utp3	93	51.974	Pygocentrus_nattereri
ENSRNOG00000003599	Utp3	100	84.696	ENSRBIG00000030025	UTP3	100	84.486	Rhinopithecus_bieti
ENSRNOG00000003599	Utp3	100	84.696	ENSRROG00000006709	UTP3	100	84.486	Rhinopithecus_roxellana
ENSRNOG00000003599	Utp3	100	83.925	ENSSBOG00000019914	UTP3	100	83.716	Saimiri_boliviensis_boliviensis
ENSRNOG00000003599	Utp3	91	68.468	ENSSHAG00000018226	UTP3	99	66.667	Sarcophilus_harrisii
ENSRNOG00000003599	Utp3	93	49.888	ENSSFOG00015007775	utp3	93	50.559	Scleropages_formosus
ENSRNOG00000003599	Utp3	93	52.876	ENSSMAG00000015156	utp3	93	52.851	Scophthalmus_maximus
ENSRNOG00000003599	Utp3	93	50.220	ENSSDUG00000014843	utp3	93	50.655	Seriola_dumerili
ENSRNOG00000003599	Utp3	74	53.117	ENSSPUG00000007404	UTP3	74	54.201	Sphenodon_punctatus
ENSRNOG00000003599	Utp3	93	52.915	ENSSPAG00000007106	utp3	93	54.505	Stegastes_partitus
ENSRNOG00000003599	Utp3	100	82.316	ENSSSCG00000028466	UTP3	100	82.526	Sus_scrofa
ENSRNOG00000003599	Utp3	93	50.670	ENSTRUG00000014591	utp3	93	51.116	Takifugu_rubripes
ENSRNOG00000003599	Utp3	95	47.921	ENSTNIG00000014783	utp3	94	53.056	Tetraodon_nigroviridis
ENSRNOG00000003599	Utp3	100	83.298	ENSTTRG00000008390	UTP3	100	82.875	Tursiops_truncatus
ENSRNOG00000003599	Utp3	100	81.342	ENSUAMG00000008914	UTP3	100	81.551	Ursus_americanus
ENSRNOG00000003599	Utp3	100	80.632	ENSUMAG00000003743	UTP3	100	81.971	Ursus_maritimus
ENSRNOG00000003599	Utp3	79	78.933	ENSVVUG00000004285	UTP3	91	78.667	Vulpes_vulpes
ENSRNOG00000003599	Utp3	97	53.448	ENSXETG00000026859	utp3	92	54.483	Xenopus_tropicalis
ENSRNOG00000003599	Utp3	93	51.101	ENSXMAG00000017071	utp3	93	51.322	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0007420	brain development	-	ISO	Process
GO:0007420	brain development	-	ISS	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component