EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000003822 (Gene tree)
Gene ID
303057
Gene Symbol
Slu7
Alias
LOC303057
Full Name
SLU7 homolog%2C splicing factor
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
14994 bases
Position
chr10:29029590-29044583
Accession
631432
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000071959Slu7PF11708.85.9e-10911
ENSRNOP00000005132Slu7PF11708.86.3e-10911
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000005132-2297XM_008767640ENSRNOP00000005132586 (aa)XP_008765862Q80ZG5
ENSRNOT00000088322-1704-ENSRNOP00000071959568 (aa)-A0A0G2K1S0
Gene Model
Click here to download ENSRNOG00000003822's gene model file
Pathways
Pathway IDPathway NameSource
rno03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003822's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000003822Slu710094.378ENSG00000164609SLU710095.222Homo_sapiens
ENSRNOG00000003822Slu79876.034ENSAPOG00000011660slu79976.552Acanthochromis_polyacanthus
ENSRNOG00000003822Slu710095.911ENSAMEG00000006613SLU710095.911Ailuropoda_melanoleuca
ENSRNOG00000003822Slu79775.263ENSACIG00000005652slu79774.182Amphilophus_citrinellus
ENSRNOG00000003822Slu79876.207ENSAPEG00000018095slu79976.379Amphiprion_percula
ENSRNOG00000003822Slu79876.389ENSATEG00000006357slu79976.389Anabas_testudineus
ENSRNOG00000003822Slu79886.458ENSAPLG00000008133SLU79886.458Anas_platyrhynchos
ENSRNOG00000003822Slu710083.503ENSACAG00000003144SLU710085.204Anolis_carolinensis
ENSRNOG00000003822Slu710094.378ENSANAG00000028320SLU710095.222Aotus_nancymaae
ENSRNOG00000003822Slu79774.914ENSACLG00000007273slu79875.086Astatotilapia_calliptera
ENSRNOG00000003822Slu79777.425ENSAMXG00000002404slu79777.153Astyanax_mexicanus
ENSRNOG00000003822Slu710095.563ENSBTAG00000008457SLU710095.563Bos_taurus
ENSRNOG00000003822Slu78545.817WBGene00010629K07C5.66548.874Caenorhabditis_elegans
ENSRNOG00000003822Slu710094.539ENSCJAG00000019132SLU710094.539Callithrix_jacchus
ENSRNOG00000003822Slu710094.719ENSCAFG00000017268SLU79395.563Canis_familiaris
ENSRNOG00000003822Slu710094.719ENSCAFG00020001456SLU79395.563Canis_lupus_dingo
ENSRNOG00000003822Slu710095.392ENSCHIG00000013793SLU710095.392Capra_hircus
ENSRNOG00000003822Slu710093.697ENSTSYG00000000157SLU710094.710Carlito_syrichta
ENSRNOG00000003822Slu710088.737ENSCAPG00000015711SLU710088.737Cavia_aperea
ENSRNOG00000003822Slu710094.027ENSCPOG00000004484SLU710094.027Cavia_porcellus
ENSRNOG00000003822Slu710094.037ENSCCAG00000035808SLU79994.881Cebus_capucinus
ENSRNOG00000003822Slu710094.208ENSCATG00000026140SLU710095.051Cercocebus_atys
ENSRNOG00000003822Slu710094.027ENSCLAG00000011915SLU710094.027Chinchilla_lanigera
ENSRNOG00000003822Slu78396.319ENSCSAG00000010383SLU79996.319Chlorocebus_sabaeus
ENSRNOG00000003822Slu710083.959ENSCHOG00000005055SLU710084.130Choloepus_hoffmanni
ENSRNOG00000003822Slu710085.179ENSCPBG00000008047SLU710085.690Chrysemys_picta_bellii
ENSRNOG00000003822Slu78560.202ENSCING00000008595zf(cchc)-127866.237Ciona_intestinalis
ENSRNOG00000003822Slu77053.052ENSCSAVG00000004927-10054.306Ciona_savignyi
ENSRNOG00000003822Slu710094.378ENSCANG00000003257SLU710095.222Colobus_angolensis_palliatus
ENSRNOG00000003822Slu79970.951ENSCGRG00001022223-9579.104Cricetulus_griseus_chok1gshd
ENSRNOG00000003822Slu710097.611ENSCGRG00001016416Slu710097.611Cricetulus_griseus_chok1gshd
ENSRNOG00000003822Slu79971.277ENSCGRG00000008655-9479.104Cricetulus_griseus_crigri
ENSRNOG00000003822Slu710097.270ENSCGRG00000005164Slu710097.270Cricetulus_griseus_crigri
ENSRNOG00000003822Slu79774.606ENSCSEG00000015522slu79875.088Cynoglossus_semilaevis
ENSRNOG00000003822Slu79776.667ENSCVAG00000019302slu79877.368Cyprinodon_variegatus
ENSRNOG00000003822Slu79778.697ENSDARG00000038870slu79078.345Danio_rerio
ENSRNOG00000003822Slu710092.833ENSDNOG00000048745SLU710093.003Dasypus_novemcinctus
ENSRNOG00000003822Slu79377.106ENSDORG00000025365-9978.022Dipodomys_ordii
ENSRNOG00000003822Slu710082.953ENSDORG00000006239-9982.953Dipodomys_ordii
ENSRNOG00000003822Slu77758.278FBgn0039626Slu79949.917Drosophila_melanogaster
ENSRNOG00000003822Slu79567.197ENSETEG00000002993-10072.829Echinops_telfairi
ENSRNOG00000003822Slu79093.573ENSETEG00000014798-10093.384Echinops_telfairi
ENSRNOG00000003822Slu79964.516ENSEBUG00000003656slu79063.959Eptatretus_burgeri
ENSRNOG00000003822Slu710093.537ENSEASG00005000613SLU710094.048Equus_asinus_asinus
ENSRNOG00000003822Slu710093.526ENSECAG00000013696SLU710094.539Equus_caballus
ENSRNOG00000003822Slu76196.386ENSEEUG00000006300-6196.386Erinaceus_europaeus
ENSRNOG00000003822Slu79873.242ENSELUG00000022607slu79973.585Esox_lucius
ENSRNOG00000003822Slu710096.252ENSFCAG00000011152SLU710096.252Felis_catus
ENSRNOG00000003822Slu76983.756ENSFALG00000014860-9784.772Ficedula_albicollis
ENSRNOG00000003822Slu710085.520ENSFALG00000013473-10085.544Ficedula_albicollis
ENSRNOG00000003822Slu710093.857ENSFDAG00000003906SLU710094.881Fukomys_damarensis
ENSRNOG00000003822Slu79776.842ENSFHEG00000012789slu79976.592Fundulus_heteroclitus
ENSRNOG00000003822Slu79668.959ENSGMOG00000016207slu79869.136Gadus_morhua
ENSRNOG00000003822Slu79986.815ENSGALG00000034414SLU78686.838Gallus_gallus
ENSRNOG00000003822Slu79974.658ENSGAFG00000007953slu79777.249Gambusia_affinis
ENSRNOG00000003822Slu79970.238ENSGACG00000018144slu79970.345Gasterosteus_aculeatus
ENSRNOG00000003822Slu710085.349ENSGAGG00000008256SLU710085.860Gopherus_agassizii
ENSRNOG00000003822Slu710094.208ENSGGOG00000005591SLU710095.051Gorilla_gorilla
ENSRNOG00000003822Slu78282.877ENSHBUG00000002296slu79283.105Haplochromis_burtoni
ENSRNOG00000003822Slu710094.198ENSHGLG00000009442-10095.222Heterocephalus_glaber_female
ENSRNOG00000003822Slu78183.087ENSHGLG00000008195-9282.158Heterocephalus_glaber_female
ENSRNOG00000003822Slu710094.198ENSHGLG00100008080-10095.222Heterocephalus_glaber_male
ENSRNOG00000003822Slu79776.316ENSHCOG00000003110slu79876.316Hippocampus_comes
ENSRNOG00000003822Slu79776.937ENSIPUG00000017949slu79876.937Ictalurus_punctatus
ENSRNOG00000003822Slu78191.579ENSSTOG00000015057SLU79891.561Ictidomys_tridecemlineatus
ENSRNOG00000003822Slu710096.075ENSJJAG00000011452Slu710095.563Jaculus_jaculus
ENSRNOG00000003822Slu79975.385ENSKMAG00000005625slu79975.897Kryptolebias_marmoratus
ENSRNOG00000003822Slu79873.529ENSLBEG00000004903slu79974.913Labrus_bergylta
ENSRNOG00000003822Slu710080.952ENSLACG00000010170SLU710080.306Latimeria_chalumnae
ENSRNOG00000003822Slu79780.952ENSLOCG00000009410slu79880.668Lepisosteus_oculatus
ENSRNOG00000003822Slu710093.345ENSLAFG00000003725SLU710093.003Loxodonta_africana
ENSRNOG00000003822Slu710094.378ENSMFAG00000002001SLU710095.222Macaca_fascicularis
ENSRNOG00000003822Slu710092.164ENSMMUG00000023075SLU710093.003Macaca_mulatta
ENSRNOG00000003822Slu710094.208ENSMNEG00000029132SLU710095.051Macaca_nemestrina
ENSRNOG00000003822Slu710094.208ENSMLEG00000037647SLU710095.051Mandrillus_leucophaeus
ENSRNOG00000003822Slu79774.350ENSMAMG00000008387slu79874.697Mastacembelus_armatus
ENSRNOG00000003822Slu710074.457ENSMZEG00005012180slu79875.880Maylandia_zebra
ENSRNOG00000003822Slu79986.473ENSMGAG00000002882SLU79986.496Meleagris_gallopavo
ENSRNOG00000003822Slu710097.952ENSMAUG00000016739Slu710097.952Mesocricetus_auratus
ENSRNOG00000003822Slu79895.122ENSMICG00000031781SLU710094.198Microcebus_murinus
ENSRNOG00000003822Slu710097.270ENSMOCG00000012963Slu710097.270Microtus_ochrogaster
ENSRNOG00000003822Slu76681.690ENSMMOG00000005988-7581.690Mola_mola
ENSRNOG00000003822Slu79776.708ENSMMOG00000004203slu79776.708Mola_mola
ENSRNOG00000003822Slu710090.614ENSMODG00000007968SLU79590.273Monodelphis_domestica
ENSRNOG00000003822Slu79774.472ENSMALG00000004247slu79874.472Monopterus_albus
ENSRNOG00000003822Slu710098.976MGP_CAROLIEiJ_G0016222Slu710099.195Mus_caroli
ENSRNOG00000003822Slu710098.294ENSMUSG00000020409Slu710098.390Mus_musculus
ENSRNOG00000003822Slu710098.805MGP_PahariEiJ_G0017358Slu710098.994Mus_pahari
ENSRNOG00000003822Slu710099.147MGP_SPRETEiJ_G0017063Slu710099.396Mus_spretus
ENSRNOG00000003822Slu710096.082ENSMPUG00000013264SLU79396.082Mustela_putorius_furo
ENSRNOG00000003822Slu710094.369ENSMLUG00000003091SLU710094.369Myotis_lucifugus
ENSRNOG00000003822Slu710096.928ENSNGAG00000015167Slu710096.928Nannospalax_galili
ENSRNOG00000003822Slu710095.051ENSNLEG00000004355SLU710095.051Nomascus_leucogenys
ENSRNOG00000003822Slu710083.618ENSMEUG00000010577SLU79983.618Notamacropus_eugenii
ENSRNOG00000003822Slu710087.734ENSOPRG00000004538SLU79987.734Ochotona_princeps
ENSRNOG00000003822Slu710086.995ENSODEG00000005892-9793.607Octodon_degus
ENSRNOG00000003822Slu710094.198ENSODEG00000010998-10094.198Octodon_degus
ENSRNOG00000003822Slu79777.544ENSONIG00000012957slu79877.544Oreochromis_niloticus
ENSRNOG00000003822Slu75890.274ENSOANG00000008090-9991.793Ornithorhynchus_anatinus
ENSRNOG00000003822Slu76585.901ENSOANG00000012329-9985.901Ornithorhynchus_anatinus
ENSRNOG00000003822Slu710094.198ENSOCUG00000011743SLU79994.198Oryctolagus_cuniculus
ENSRNOG00000003822Slu79974.536ENSORLG00000005505slu79974.536Oryzias_latipes
ENSRNOG00000003822Slu79676.896ENSORLG00020011665slu79776.896Oryzias_latipes_hni
ENSRNOG00000003822Slu79676.896ENSORLG00015002040slu79776.896Oryzias_latipes_hsok
ENSRNOG00000003822Slu79776.491ENSOMEG00000006235slu79776.491Oryzias_melastigma
ENSRNOG00000003822Slu710094.037ENSOGAG00000012301SLU710094.881Otolemur_garnettii
ENSRNOG00000003822Slu710094.710ENSOARG00000013468SLU710094.881Ovis_aries
ENSRNOG00000003822Slu710094.208ENSPPAG00000032717SLU710095.051Pan_paniscus
ENSRNOG00000003822Slu710095.911ENSPPRG00000013856SLU710095.911Panthera_pardus
ENSRNOG00000003822Slu710095.911ENSPTIG00000005434SLU710095.911Panthera_tigris_altaica
ENSRNOG00000003822Slu710094.881ENSPTRG00000017491SLU710094.881Pan_troglodytes
ENSRNOG00000003822Slu710094.539ENSPANG00000006850SLU710094.719Papio_anubis
ENSRNOG00000003822Slu79876.339ENSPKIG00000009367slu79976.511Paramormyrops_kingsleyae
ENSRNOG00000003822Slu710083.926ENSPSIG00000011216SLU710084.433Pelodiscus_sinensis
ENSRNOG00000003822Slu79775.132ENSPMGG00000015695slu79675.132Periophthalmus_magnuspinnatus
ENSRNOG00000003822Slu79977.320ENSPEMG00000000564-9976.976Peromyscus_maniculatus_bairdii
ENSRNOG00000003822Slu710097.611ENSPEMG00000016646-10097.611Peromyscus_maniculatus_bairdii
ENSRNOG00000003822Slu710088.737ENSPCIG00000018111SLU79988.927Phascolarctos_cinereus
ENSRNOG00000003822Slu79874.913ENSPFOG00000009050slu79976.125Poecilia_formosa
ENSRNOG00000003822Slu79875.130ENSPLAG00000005330slu79975.993Poecilia_latipinna
ENSRNOG00000003822Slu79775.789ENSPMEG00000024369slu79877.018Poecilia_mexicana
ENSRNOG00000003822Slu79776.232ENSPREG00000004355slu79877.113Poecilia_reticulata
ENSRNOG00000003822Slu710094.208ENSPPYG00000016008SLU710095.051Pongo_abelii
ENSRNOG00000003822Slu77797.436ENSPCAG00000003323SLU78597.436Procavia_capensis
ENSRNOG00000003822Slu710090.785ENSPCOG00000016138SLU710090.785Propithecus_coquereli
ENSRNOG00000003822Slu78293.067ENSPVAG00000015935SLU78292.593Pteropus_vampyrus
ENSRNOG00000003822Slu710073.154ENSPNYG00000000289slu79875.880Pundamilia_nyererei
ENSRNOG00000003822Slu79464.610ENSPNYG00000024087-9763.748Pundamilia_nyererei
ENSRNOG00000003822Slu79777.954ENSPNAG00000006885slu79877.329Pygocentrus_nattereri
ENSRNOG00000003822Slu710092.007ENSRBIG00000021391SLU710092.517Rhinopithecus_bieti
ENSRNOG00000003822Slu710094.378ENSRROG00000008930SLU710095.222Rhinopithecus_roxellana
ENSRNOG00000003822Slu710094.549ENSSBOG00000003225SLU710095.392Saimiri_boliviensis_boliviensis
ENSRNOG00000003822Slu710090.785ENSSHAG00000009841-10090.444Sarcophilus_harrisii
ENSRNOG00000003822Slu79981.709ENSSHAG00000007807-10081.538Sarcophilus_harrisii
ENSRNOG00000003822Slu79778.735ENSSFOG00015015923slu79779.298Scleropages_formosus
ENSRNOG00000003822Slu79973.630ENSSMAG00000004281slu79973.459Scophthalmus_maximus
ENSRNOG00000003822Slu79875.130ENSSDUG00000005127slu79876.357Seriola_dumerili
ENSRNOG00000003822Slu79875.475ENSSLDG00000014353slu79876.708Seriola_lalandi_dorsalis
ENSRNOG00000003822Slu79884.549ENSSARG00000014139-10084.375Sorex_araneus
ENSRNOG00000003822Slu79885.590ENSSARG00000014137-10084.722Sorex_araneus
ENSRNOG00000003822Slu79284.171ENSSARG00000014506-10083.799Sorex_araneus
ENSRNOG00000003822Slu77386.571ENSSARG00000006390-10087.050Sorex_araneus
ENSRNOG00000003822Slu79884.375ENSSARG00000006902-10084.028Sorex_araneus
ENSRNOG00000003822Slu76180.899ENSSARG00000006540-10080.618Sorex_araneus
ENSRNOG00000003822Slu79883.333ENSSARG00000001869-10082.812Sorex_araneus
ENSRNOG00000003822Slu78187.288ENSSARG00000014128-10087.288Sorex_araneus
ENSRNOG00000003822Slu710079.352ENSSARG00000012209-10079.352Sorex_araneus
ENSRNOG00000003822Slu710084.915ENSSPUG00000000666SLU710085.424Sphenodon_punctatus
ENSRNOG00000003822Slu79776.316ENSSPAG00000014100slu79976.190Stegastes_partitus
ENSRNOG00000003822Slu710096.422ENSSSCG00000017033SLU710096.422Sus_scrofa
ENSRNOG00000003822Slu710085.690ENSTGUG00000001410SLU79985.714Taeniopygia_guttata
ENSRNOG00000003822Slu79774.035ENSTRUG00000001335slu79874.035Takifugu_rubripes
ENSRNOG00000003822Slu79973.891ENSTNIG00000009677slu710073.830Tetraodon_nigroviridis
ENSRNOG00000003822Slu710080.034ENSTBEG00000015604SLU79980.375Tupaia_belangeri
ENSRNOG00000003822Slu79095.274ENSTTRG00000011575SLU710094.896Tursiops_truncatus
ENSRNOG00000003822Slu710096.082ENSUMAG00000000110SLU79296.082Ursus_maritimus
ENSRNOG00000003822Slu710093.174ENSVPAG00000009595SLU710093.174Vicugna_pacos
ENSRNOG00000003822Slu710096.593ENSVVUG00000003989SLU79395.734Vulpes_vulpes
ENSRNOG00000003822Slu79878.856ENSXETG00000016536slu79782.112Xenopus_tropicalis
ENSRNOG00000003822Slu79775.880ENSXCOG00000004207slu79875.838Xiphophorus_couchianus
ENSRNOG00000003822Slu79775.789ENSXMAG00000009007slu79877.018Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000375RNA splicing, via transesterification reactions-ISOProcess
GO:0000375RNA splicing, via transesterification reactions15181151.ISSProcess
GO:0000380alternative mRNA splicing, via spliceosome-ISOProcess
GO:0000380alternative mRNA splicing, via spliceosome15181151.ISSProcess
GO:0000386second spliceosomal transesterification activity21873635.IBAFunction
GO:0000386second spliceosomal transesterification activity-IEAFunction
GO:0000386second spliceosomal transesterification activity-ISOFunction
GO:0000386second spliceosomal transesterification activity15181151.ISSFunction
GO:0000389mRNA 3'-splice site recognition-ISOProcess
GO:0000389mRNA 3'-splice site recognition15181151.ISSProcess
GO:0000398mRNA splicing, via spliceosome-IEAProcess
GO:0003674molecular_function-NDFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus-ISOComponent
GO:0005634nucleus-ISSComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005681spliceosomal complex21873635.IBAComponent
GO:0005681spliceosomal complex-ISOComponent
GO:0005681spliceosomal complex15181151.ISSComponent
GO:0005737cytoplasm-ISOComponent
GO:0005737cytoplasm-ISSComponent
GO:0005829cytosol-IEAComponent
GO:0005829cytosol-ISOComponent
GO:0006886intracellular protein transport-ISOProcess
GO:0006886intracellular protein transport-ISSProcess
GO:0008150biological_process-NDProcess
GO:0008270zinc ion binding-ISOFunction
GO:0008270zinc ion binding15181151.ISSFunction
GO:0016607nuclear speck-ISOComponent
GO:0016607nuclear speck15181151.ISSComponent
GO:0030532small nuclear ribonucleoprotein complex-ISOComponent
GO:0030532small nuclear ribonucleoprotein complex15181151.ISSComponent
GO:0030628pre-mRNA 3'-splice site binding-IEAFunction
GO:0030628pre-mRNA 3'-splice site binding-ISOFunction
GO:0030628pre-mRNA 3'-splice site binding15181151.ISSFunction
GO:0034605cellular response to heat-ISOProcess
GO:0034605cellular response to heat-ISSProcess
GO:0043231intracellular membrane-bounded organelle-ISOComponent
GO:0071013catalytic step 2 spliceosome-IEAComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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