EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000003979 (Gene tree)
Gene ID: 304761
Gene Symbol: Zranb3
Alias: LOC304761|RGD1564952
Full Name: zinc finger RANBP2-type containing 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 137146 bases
Position: chr13:44661398-44798543
Accession: 1564952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000005355	ResIII	PF04851.15	7.3e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000005355	-	4076	XM_006249701	ENSRNOP00000005355	1072 (aa)	XP_006249763	D3ZDS8

Gene Model

Click here to download ENSRNOG00000003979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000003979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000003979	Zranb3	99	75.626	ENSG00000121988	ZRANB3	94	83.416	Homo_sapiens
ENSRNOG00000003979	Zranb3	92	59.733	ENSAPOG00000020872	zranb3	99	53.038	Acanthochromis_polyacanthus
ENSRNOG00000003979	Zranb3	94	74.634	ENSAMEG00000016419	ZRANB3	99	74.634	Ailuropoda_melanoleuca
ENSRNOG00000003979	Zranb3	96	54.917	ENSACIG00000018832	zranb3	98	54.917	Amphilophus_citrinellus
ENSRNOG00000003979	Zranb3	91	59.578	ENSAOCG00000005122	zranb3	93	56.459	Amphiprion_ocellaris
ENSRNOG00000003979	Zranb3	91	59.125	ENSAPEG00000016183	zranb3	93	55.616	Amphiprion_percula
ENSRNOG00000003979	Zranb3	95	53.704	ENSATEG00000000257	zranb3	98	53.921	Anabas_testudineus
ENSRNOG00000003979	Zranb3	93	62.195	ENSAPLG00000014815	ZRANB3	99	63.093	Anas_platyrhynchos
ENSRNOG00000003979	Zranb3	97	61.679	ENSACAG00000001934	ZRANB3	99	61.679	Anolis_carolinensis
ENSRNOG00000003979	Zranb3	99	74.954	ENSANAG00000028768	ZRANB3	96	75.832	Aotus_nancymaae
ENSRNOG00000003979	Zranb3	91	61.796	ENSACLG00000027313	zranb3	98	55.386	Astatotilapia_calliptera
ENSRNOG00000003979	Zranb3	97	53.555	ENSAMXG00000003555	zranb3	98	53.740	Astyanax_mexicanus
ENSRNOG00000003979	Zranb3	98	74.976	ENSBTAG00000026842	ZRANB3	97	84.466	Bos_taurus
ENSRNOG00000003979	Zranb3	99	75.208	ENSCJAG00000011678	-	100	75.208	Callithrix_jacchus
ENSRNOG00000003979	Zranb3	55	79.496	ENSCJAG00000016365	-	98	84.387	Callithrix_jacchus
ENSRNOG00000003979	Zranb3	99	74.233	ENSCAFG00000005054	ZRANB3	99	74.233	Canis_familiaris
ENSRNOG00000003979	Zranb3	99	74.419	ENSCAFG00020016080	ZRANB3	99	82.987	Canis_lupus_dingo
ENSRNOG00000003979	Zranb3	98	74.883	ENSCHIG00000025781	ZRANB3	99	74.883	Capra_hircus
ENSRNOG00000003979	Zranb3	56	77.796	ENSCPOG00000010385	-	99	82.398	Cavia_porcellus
ENSRNOG00000003979	Zranb3	99	75.116	ENSCCAG00000012014	ZRANB3	100	75.116	Cebus_capucinus
ENSRNOG00000003979	Zranb3	99	73.173	ENSCATG00000041950	ZRANB3	100	73.173	Cercocebus_atys
ENSRNOG00000003979	Zranb3	97	73.629	ENSCLAG00000006849	ZRANB3	99	73.629	Chinchilla_lanigera
ENSRNOG00000003979	Zranb3	93	76.153	ENSCSAG00000016368	ZRANB3	100	76.153	Chlorocebus_sabaeus
ENSRNOG00000003979	Zranb3	97	62.996	ENSCPBG00000010250	ZRANB3	99	63.340	Chrysemys_picta_bellii
ENSRNOG00000003979	Zranb3	99	72.155	ENSCANG00000031772	ZRANB3	100	72.155	Colobus_angolensis_palliatus
ENSRNOG00000003979	Zranb3	99	83.551	ENSCGRG00001000424	Zranb3	99	83.551	Cricetulus_griseus_chok1gshd
ENSRNOG00000003979	Zranb3	99	83.551	ENSCGRG00000011356	Zranb3	99	83.551	Cricetulus_griseus_crigri
ENSRNOG00000003979	Zranb3	96	52.878	ENSCSEG00000009111	zranb3	94	52.878	Cynoglossus_semilaevis
ENSRNOG00000003979	Zranb3	96	55.659	ENSDARG00000091538	zranb3	99	71.103	Danio_rerio
ENSRNOG00000003979	Zranb3	93	74.733	ENSDNOG00000013613	ZRANB3	99	74.733	Dasypus_novemcinctus
ENSRNOG00000003979	Zranb3	57	71.311	ENSDORG00000004211	-	99	81.890	Dipodomys_ordii
ENSRNOG00000003979	Zranb3	99	74.930	ENSEASG00005007414	ZRANB3	100	74.930	Equus_asinus_asinus
ENSRNOG00000003979	Zranb3	99	74.930	ENSECAG00000011232	ZRANB3	100	74.930	Equus_caballus
ENSRNOG00000003979	Zranb3	83	70.000	ENSEEUG00000011221	ZRANB3	91	70.000	Erinaceus_europaeus
ENSRNOG00000003979	Zranb3	96	51.979	ENSELUG00000014333	zranb3	99	52.230	Esox_lucius
ENSRNOG00000003979	Zranb3	99	73.860	ENSFCAG00000024830	ZRANB3	99	73.860	Felis_catus
ENSRNOG00000003979	Zranb3	99	74.490	ENSFDAG00000012573	ZRANB3	100	74.490	Fukomys_damarensis
ENSRNOG00000003979	Zranb3	97	54.044	ENSFHEG00000018772	zranb3	99	54.044	Fundulus_heteroclitus
ENSRNOG00000003979	Zranb3	85	59.770	ENSGMOG00000002692	zranb3	91	59.770	Gadus_morhua
ENSRNOG00000003979	Zranb3	96	53.832	ENSGAFG00000006177	zranb3	98	53.832	Gambusia_affinis
ENSRNOG00000003979	Zranb3	96	54.757	ENSGACG00000014926	zranb3	99	55.037	Gasterosteus_aculeatus
ENSRNOG00000003979	Zranb3	97	62.986	ENSGAGG00000020998	ZRANB3	99	62.986	Gopherus_agassizii
ENSRNOG00000003979	Zranb3	99	75.393	ENSGGOG00000003782	ZRANB3	100	75.393	Gorilla_gorilla
ENSRNOG00000003979	Zranb3	91	61.948	ENSHBUG00000015687	zranb3	98	56.501	Haplochromis_burtoni
ENSRNOG00000003979	Zranb3	99	74.399	ENSHGLG00000015976	ZRANB3	98	74.399	Heterocephalus_glaber_female
ENSRNOG00000003979	Zranb3	99	74.399	ENSHGLG00100001612	ZRANB3	98	74.399	Heterocephalus_glaber_male
ENSRNOG00000003979	Zranb3	97	51.855	ENSHCOG00000013395	zranb3	99	52.339	Hippocampus_comes
ENSRNOG00000003979	Zranb3	94	53.276	ENSIPUG00000013812	zranb3	93	52.612	Ictalurus_punctatus
ENSRNOG00000003979	Zranb3	98	73.763	ENSSTOG00000010155	ZRANB3	99	73.763	Ictidomys_tridecemlineatus
ENSRNOG00000003979	Zranb3	56	79.146	ENSJJAG00000018858	-	99	83.398	Jaculus_jaculus
ENSRNOG00000003979	Zranb3	96	53.677	ENSKMAG00000013326	zranb3	99	53.677	Kryptolebias_marmoratus
ENSRNOG00000003979	Zranb3	93	61.677	ENSLBEG00000027937	zranb3	95	53.426	Labrus_bergylta
ENSRNOG00000003979	Zranb3	97	54.743	ENSLOCG00000001673	zranb3	99	54.743	Lepisosteus_oculatus
ENSRNOG00000003979	Zranb3	98	73.821	ENSLAFG00000015733	ZRANB3	97	85.210	Loxodonta_africana
ENSRNOG00000003979	Zranb3	99	75.162	ENSMFAG00000034071	ZRANB3	96	75.162	Macaca_fascicularis
ENSRNOG00000003979	Zranb3	93	76.144	ENSMMUG00000000765	ZRANB3	99	76.144	Macaca_mulatta
ENSRNOG00000003979	Zranb3	93	72.576	ENSMNEG00000015978	ZRANB3	97	72.576	Macaca_nemestrina
ENSRNOG00000003979	Zranb3	99	72.340	ENSMLEG00000028200	ZRANB3	99	75.906	Mandrillus_leucophaeus
ENSRNOG00000003979	Zranb3	91	60.653	ENSMAMG00000004740	zranb3	98	52.753	Mastacembelus_armatus
ENSRNOG00000003979	Zranb3	96	54.408	ENSMZEG00005003316	zranb3	98	54.080	Maylandia_zebra
ENSRNOG00000003979	Zranb3	91	61.395	ENSMGAG00000012454	ZRANB3	99	61.591	Meleagris_gallopavo
ENSRNOG00000003979	Zranb3	99	82.617	ENSMAUG00000002029	Zranb3	100	82.617	Mesocricetus_auratus
ENSRNOG00000003979	Zranb3	99	76.509	ENSMICG00000013893	ZRANB3	100	76.509	Microcebus_murinus
ENSRNOG00000003979	Zranb3	99	67.550	ENSMODG00000000848	ZRANB3	98	67.733	Monodelphis_domestica
ENSRNOG00000003979	Zranb3	92	58.850	ENSMALG00000009120	zranb3	89	58.850	Monopterus_albus
ENSRNOG00000003979	Zranb3	99	86.436	ENSMUSG00000036086	Zranb3	100	86.436	Mus_musculus
ENSRNOG00000003979	Zranb3	99	86.249	MGP_PahariEiJ_G0027778	Zranb3	100	86.249	Mus_pahari
ENSRNOG00000003979	Zranb3	99	86.155	MGP_SPRETEiJ_G0015349	Zranb3	100	86.155	Mus_spretus
ENSRNOG00000003979	Zranb3	99	73.981	ENSMPUG00000002528	ZRANB3	100	73.981	Mustela_putorius_furo
ENSRNOG00000003979	Zranb3	86	69.863	ENSMLUG00000009977	ZRANB3	100	69.863	Myotis_lucifugus
ENSRNOG00000003979	Zranb3	99	80.037	ENSNGAG00000010584	Zranb3	100	80.037	Nannospalax_galili
ENSRNOG00000003979	Zranb3	96	55.305	ENSNBRG00000013928	zranb3	98	55.681	Neolamprologus_brichardi
ENSRNOG00000003979	Zranb3	99	75.486	ENSNLEG00000008561	ZRANB3	100	75.486	Nomascus_leucogenys
ENSRNOG00000003979	Zranb3	92	70.423	ENSMEUG00000009722	ZRANB3	92	70.423	Notamacropus_eugenii
ENSRNOG00000003979	Zranb3	96	66.603	ENSOPRG00000001431	ZRANB3	100	66.603	Ochotona_princeps
ENSRNOG00000003979	Zranb3	91	61.876	ENSONIG00000012025	zranb3	98	70.935	Oreochromis_niloticus
ENSRNOG00000003979	Zranb3	99	62.432	ENSOANG00000007986	ZRANB3	97	62.432	Ornithorhynchus_anatinus
ENSRNOG00000003979	Zranb3	83	75.602	ENSOCUG00000007243	ZRANB3	100	75.602	Oryctolagus_cuniculus
ENSRNOG00000003979	Zranb3	96	56.695	ENSORLG00000004324	zranb3	100	55.189	Oryzias_latipes
ENSRNOG00000003979	Zranb3	96	55.464	ENSORLG00020019171	zranb3	97	55.464	Oryzias_latipes_hni
ENSRNOG00000003979	Zranb3	96	56.600	ENSORLG00015017218	zranb3	99	56.600	Oryzias_latipes_hsok
ENSRNOG00000003979	Zranb3	96	55.718	ENSOMEG00000000999	zranb3	99	54.404	Oryzias_melastigma
ENSRNOG00000003979	Zranb3	99	74.095	ENSOARG00000010922	ZRANB3	100	73.849	Ovis_aries
ENSRNOG00000003979	Zranb3	99	75.185	ENSPPAG00000029480	ZRANB3	100	75.185	Pan_paniscus
ENSRNOG00000003979	Zranb3	99	73.587	ENSPPRG00000006011	ZRANB3	100	73.587	Panthera_pardus
ENSRNOG00000003979	Zranb3	99	73.772	ENSPTIG00000014207	ZRANB3	100	73.772	Panthera_tigris_altaica
ENSRNOG00000003979	Zranb3	99	75.393	ENSPTRG00000012492	ZRANB3	100	75.906	Pan_troglodytes
ENSRNOG00000003979	Zranb3	93	74.829	ENSPANG00000007838	ZRANB3	99	74.829	Papio_anubis
ENSRNOG00000003979	Zranb3	97	56.752	ENSPKIG00000011277	zranb3	99	56.752	Paramormyrops_kingsleyae
ENSRNOG00000003979	Zranb3	97	62.726	ENSPSIG00000005377	ZRANB3	98	62.906	Pelodiscus_sinensis
ENSRNOG00000003979	Zranb3	86	57.861	ENSPMGG00000011296	zranb3	92	58.023	Periophthalmus_magnuspinnatus
ENSRNOG00000003979	Zranb3	93	83.317	ENSPEMG00000020506	-	96	83.317	Peromyscus_maniculatus_bairdii
ENSRNOG00000003979	Zranb3	96	53.376	ENSPMAG00000009550	zranb3	100	53.473	Petromyzon_marinus
ENSRNOG00000003979	Zranb3	99	67.585	ENSPCIG00000002444	ZRANB3	100	67.585	Phascolarctos_cinereus
ENSRNOG00000003979	Zranb3	96	54.762	ENSPFOG00000015201	zranb3	98	55.150	Poecilia_formosa
ENSRNOG00000003979	Zranb3	90	61.957	ENSPLAG00000018028	zranb3	98	54.054	Poecilia_latipinna
ENSRNOG00000003979	Zranb3	96	55.186	ENSPMEG00000023931	zranb3	95	54.972	Poecilia_mexicana
ENSRNOG00000003979	Zranb3	96	53.423	ENSPREG00000008183	zranb3	99	53.423	Poecilia_reticulata
ENSRNOG00000003979	Zranb3	99	74.838	ENSPPYG00000012814	ZRANB3	100	74.838	Pongo_abelii
ENSRNOG00000003979	Zranb3	93	69.638	ENSPCOG00000003732	ZRANB3	99	69.638	Propithecus_coquereli
ENSRNOG00000003979	Zranb3	98	70.522	ENSPVAG00000006096	ZRANB3	99	70.522	Pteropus_vampyrus
ENSRNOG00000003979	Zranb3	89	61.256	ENSPNYG00000008630	zranb3	98	55.650	Pundamilia_nyererei
ENSRNOG00000003979	Zranb3	93	55.513	ENSPNAG00000013880	zranb3	100	55.608	Pygocentrus_nattereri
ENSRNOG00000003979	Zranb3	93	71.988	ENSRBIG00000039852	ZRANB3	100	71.988	Rhinopithecus_bieti
ENSRNOG00000003979	Zranb3	93	75.713	ENSSBOG00000021135	ZRANB3	100	75.713	Saimiri_boliviensis_boliviensis
ENSRNOG00000003979	Zranb3	99	67.339	ENSSHAG00000016465	ZRANB3	98	82.456	Sarcophilus_harrisii
ENSRNOG00000003979	Zranb3	93	53.189	ENSSMAG00000001632	zranb3	98	53.189	Scophthalmus_maximus
ENSRNOG00000003979	Zranb3	92	59.821	ENSSDUG00000010804	zranb3	99	52.185	Seriola_dumerili
ENSRNOG00000003979	Zranb3	91	73.084	ENSSPUG00000004049	ZRANB3	99	73.084	Sphenodon_punctatus
ENSRNOG00000003979	Zranb3	97	54.887	ENSSPAG00000004802	zranb3	95	66.582	Stegastes_partitus
ENSRNOG00000003979	Zranb3	99	75.302	ENSSSCG00000015694	ZRANB3	100	75.302	Sus_scrofa
ENSRNOG00000003979	Zranb3	96	63.465	ENSTGUG00000011743	ZRANB3	100	63.396	Taeniopygia_guttata
ENSRNOG00000003979	Zranb3	94	60.829	ENSTRUG00000011885	zranb3	99	52.687	Takifugu_rubripes
ENSRNOG00000003979	Zranb3	96	55.929	ENSTNIG00000010363	zranb3	98	55.929	Tetraodon_nigroviridis
ENSRNOG00000003979	Zranb3	99	71.323	ENSTTRG00000003932	ZRANB3	100	71.323	Tursiops_truncatus
ENSRNOG00000003979	Zranb3	55	78.305	ENSUAMG00000018717	-	96	78.305	Ursus_americanus
ENSRNOG00000003979	Zranb3	99	74.605	ENSUMAG00000005407	ZRANB3	97	83.883	Ursus_maritimus
ENSRNOG00000003979	Zranb3	99	72.063	ENSVPAG00000001487	ZRANB3	100	72.063	Vicugna_pacos
ENSRNOG00000003979	Zranb3	91	82.353	ENSVVUG00000006362	ZRANB3	99	82.353	Vulpes_vulpes
ENSRNOG00000003979	Zranb3	96	53.497	ENSXMAG00000007875	zranb3	98	53.937	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000733	DNA strand renaturation	-	IEA	Process
GO:0003678	DNA helicase activity	-	ISO	Function
GO:0004520	endodeoxyribonuclease activity	21873635.	IBA	Function
GO:0004520	endodeoxyribonuclease activity	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006281	DNA repair	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0009411	response to UV	-	IEA	Process
GO:0009411	response to UV	-	ISO	Process
GO:0031297	replication fork processing	21873635.	IBA	Process
GO:0031297	replication fork processing	-	ISO	Process
GO:0036292	DNA rewinding	21873635.	IBA	Process
GO:0036292	DNA rewinding	-	ISO	Process
GO:0036310	annealing helicase activity	21873635.	IBA	Function
GO:0036310	annealing helicase activity	-	ISO	Function
GO:0043596	nuclear replication fork	21873635.	IBA	Component
GO:0043596	nuclear replication fork	-	ISO	Component
GO:0045910	negative regulation of DNA recombination	-	IEA	Process
GO:0045910	negative regulation of DNA recombination	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048478	replication fork protection	21873635.	IBA	Process
GO:0048478	replication fork protection	-	ISO	Process
GO:0070530	K63-linked polyubiquitin modification-dependent protein binding	-	IEA	Function
GO:0070530	K63-linked polyubiquitin modification-dependent protein binding	-	ISO	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process