EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004004 (Gene tree)
Gene ID: 314381
Gene Symbol: Nrde2
Alias: LOC314381|RGD1565082
Full Name: NRDE-2%2C necessary for RNA interference%2C domain containing
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 35010 bases
Position: chr6:124142395-124177404
Accession: 1565082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000005369	NRDE-2	PF08424.10	5.9e-104	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000005369	-	3570	XM_234465	ENSRNOP00000005369	1054 (aa)	XP_234465	D3ZDR9

Gene Model

Click here to download ENSRNOG00000004004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004004	Nrde2	100	79.943	ENSG00000119720	NRDE2	100	86.765	Homo_sapiens
ENSRNOG00000004004	Nrde2	100	44.165	ENSAPOG00000009202	nrde2	90	43.548	Acanthochromis_polyacanthus
ENSRNOG00000004004	Nrde2	100	75.354	ENSAMEG00000001807	NRDE2	90	75.637	Ailuropoda_melanoleuca
ENSRNOG00000004004	Nrde2	90	47.077	ENSACIG00000014783	nrde2	86	49.485	Amphilophus_citrinellus
ENSRNOG00000004004	Nrde2	100	45.193	ENSAOCG00000015576	nrde2	90	44.744	Amphiprion_ocellaris
ENSRNOG00000004004	Nrde2	100	45.562	ENSAPEG00000001711	nrde2	90	44.846	Amphiprion_percula
ENSRNOG00000004004	Nrde2	100	44.704	ENSATEG00000010247	nrde2	90	44.964	Anabas_testudineus
ENSRNOG00000004004	Nrde2	98	59.583	ENSAPLG00000015870	NRDE2	90	59.583	Anas_platyrhynchos
ENSRNOG00000004004	Nrde2	100	54.963	ENSACAG00000014571	NRDE2	90	54.869	Anolis_carolinensis
ENSRNOG00000004004	Nrde2	100	75.940	ENSANAG00000025313	NRDE2	90	75.940	Aotus_nancymaae
ENSRNOG00000004004	Nrde2	100	43.812	ENSACLG00000025154	nrde2	91	43.812	Astatotilapia_calliptera
ENSRNOG00000004004	Nrde2	90	45.124	ENSAMXG00000034642	nrde2	81	46.906	Astyanax_mexicanus
ENSRNOG00000004004	Nrde2	100	73.346	ENSBTAG00000005427	NRDE2	90	73.346	Bos_taurus
ENSRNOG00000004004	Nrde2	100	79.076	ENSCJAG00000017711	NRDE2	90	79.076	Callithrix_jacchus
ENSRNOG00000004004	Nrde2	100	73.714	ENSCAFG00000017515	NRDE2	91	73.714	Canis_familiaris
ENSRNOG00000004004	Nrde2	100	76.437	ENSCAFG00020016346	NRDE2	91	76.720	Canis_lupus_dingo
ENSRNOG00000004004	Nrde2	100	73.062	ENSCHIG00000005876	NRDE2	90	73.157	Capra_hircus
ENSRNOG00000004004	Nrde2	100	75.118	ENSTSYG00000000161	NRDE2	90	74.834	Carlito_syrichta
ENSRNOG00000004004	Nrde2	98	79.712	ENSCAPG00000012039	NRDE2	90	79.712	Cavia_aperea
ENSRNOG00000004004	Nrde2	100	80.038	ENSCPOG00000002428	NRDE2	90	80.038	Cavia_porcellus
ENSRNOG00000004004	Nrde2	100	77.945	ENSCCAG00000024917	NRDE2	91	77.981	Cebus_capucinus
ENSRNOG00000004004	Nrde2	100	80.322	ENSCLAG00000015185	NRDE2	90	80.322	Chinchilla_lanigera
ENSRNOG00000004004	Nrde2	100	80.322	ENSCSAG00000011451	NRDE2	90	80.322	Chlorocebus_sabaeus
ENSRNOG00000004004	Nrde2	73	73.368	ENSCHOG00000006165	NRDE2	66	73.368	Choloepus_hoffmanni
ENSRNOG00000004004	Nrde2	100	62.782	ENSCPBG00000008537	NRDE2	88	63.252	Chrysemys_picta_bellii
ENSRNOG00000004004	Nrde2	100	79.754	ENSCANG00000029067	NRDE2	90	79.754	Colobus_angolensis_palliatus
ENSRNOG00000004004	Nrde2	100	87.500	ENSCGRG00001015658	Nrde2	91	87.406	Cricetulus_griseus_chok1gshd
ENSRNOG00000004004	Nrde2	100	87.830	ENSCGRG00000005062	Nrde2	90	87.830	Cricetulus_griseus_crigri
ENSRNOG00000004004	Nrde2	90	47.795	ENSCSEG00000000089	nrde2	88	49.692	Cynoglossus_semilaevis
ENSRNOG00000004004	Nrde2	100	44.182	ENSCVAG00000023105	nrde2	90	44.273	Cyprinodon_variegatus
ENSRNOG00000004004	Nrde2	100	48.155	ENSDARG00000074726	nrde2	90	47.996	Danio_rerio
ENSRNOG00000004004	Nrde2	100	76.771	ENSDNOG00000024057	NRDE2	90	76.771	Dasypus_novemcinctus
ENSRNOG00000004004	Nrde2	78	79.951	ENSDORG00000003197	Nrde2	88	79.951	Dipodomys_ordii
ENSRNOG00000004004	Nrde2	73	68.782	ENSETEG00000000198	NRDE2	66	68.782	Echinops_telfairi
ENSRNOG00000004004	Nrde2	99	38.038	ENSEBUG00000014552	nrde2	90	38.257	Eptatretus_burgeri
ENSRNOG00000004004	Nrde2	100	78.903	ENSEASG00005020675	NRDE2	90	78.903	Equus_asinus_asinus
ENSRNOG00000004004	Nrde2	100	78.997	ENSECAG00000003862	NRDE2	96	78.997	Equus_caballus
ENSRNOG00000004004	Nrde2	63	75.385	ENSEEUG00000004026	-	57	78.652	Erinaceus_europaeus
ENSRNOG00000004004	Nrde2	100	47.953	ENSELUG00000005973	nrde2	90	47.680	Esox_lucius
ENSRNOG00000004004	Nrde2	100	77.010	ENSFCAG00000011312	NRDE2	90	77.200	Felis_catus
ENSRNOG00000004004	Nrde2	100	59.328	ENSFALG00000012260	NRDE2	90	58.643	Ficedula_albicollis
ENSRNOG00000004004	Nrde2	100	80.057	ENSFDAG00000021350	NRDE2	90	80.057	Fukomys_damarensis
ENSRNOG00000004004	Nrde2	100	45.167	ENSFHEG00000021385	nrde2	90	45.841	Fundulus_heteroclitus
ENSRNOG00000004004	Nrde2	60	55.833	ENSGMOG00000015815	nrde2	76	55.556	Gadus_morhua
ENSRNOG00000004004	Nrde2	100	58.972	ENSGALG00000010677	NRDE2	90	59.065	Gallus_gallus
ENSRNOG00000004004	Nrde2	90	46.846	ENSGAFG00000019546	nrde2	86	49.437	Gambusia_affinis
ENSRNOG00000004004	Nrde2	100	47.339	ENSGACG00000012619	nrde2	90	46.514	Gasterosteus_aculeatus
ENSRNOG00000004004	Nrde2	100	62.406	ENSGAGG00000003252	NRDE2	90	63.064	Gopherus_agassizii
ENSRNOG00000004004	Nrde2	100	79.849	ENSGGOG00000008835	NRDE2	90	79.923	Gorilla_gorilla
ENSRNOG00000004004	Nrde2	99	44.123	ENSHBUG00000016736	nrde2	90	44.033	Haplochromis_burtoni
ENSRNOG00000004004	Nrde2	100	81.079	ENSHGLG00000006731	NRDE2	90	81.079	Heterocephalus_glaber_female
ENSRNOG00000004004	Nrde2	98	81.081	ENSHGLG00100017736	NRDE2	89	81.081	Heterocephalus_glaber_male
ENSRNOG00000004004	Nrde2	90	43.044	ENSHCOG00000009559	nrde2	88	43.731	Hippocampus_comes
ENSRNOG00000004004	Nrde2	100	44.496	ENSIPUG00000016129	nrde2	90	44.403	Ictalurus_punctatus
ENSRNOG00000004004	Nrde2	100	80.322	ENSSTOG00000001678	NRDE2	90	80.322	Ictidomys_tridecemlineatus
ENSRNOG00000004004	Nrde2	100	80.773	ENSJJAG00000000907	Nrde2	90	80.773	Jaculus_jaculus
ENSRNOG00000004004	Nrde2	86	48.229	ENSKMAG00000008647	nrde2	91	44.563	Kryptolebias_marmoratus
ENSRNOG00000004004	Nrde2	95	44.186	ENSLBEG00000021428	nrde2	98	44.856	Labrus_bergylta
ENSRNOG00000004004	Nrde2	68	58.856	ENSLACG00000013921	NRDE2	87	58.856	Latimeria_chalumnae
ENSRNOG00000004004	Nrde2	100	51.268	ENSLOCG00000009037	nrde2	90	50.687	Lepisosteus_oculatus
ENSRNOG00000004004	Nrde2	98	74.736	ENSLAFG00000004966	NRDE2	90	74.736	Loxodonta_africana
ENSRNOG00000004004	Nrde2	78	82.260	ENSMMUG00000010442	NRDE2	100	87.255	Macaca_mulatta
ENSRNOG00000004004	Nrde2	100	43.324	ENSMAMG00000013452	nrde2	90	43.590	Mastacembelus_armatus
ENSRNOG00000004004	Nrde2	100	43.902	ENSMZEG00005008319	nrde2	91	43.722	Maylandia_zebra
ENSRNOG00000004004	Nrde2	83	62.955	ENSMGAG00000013052	NRDE2	89	62.955	Meleagris_gallopavo
ENSRNOG00000004004	Nrde2	100	88.302	ENSMAUG00000018578	Nrde2	90	88.302	Mesocricetus_auratus
ENSRNOG00000004004	Nrde2	100	79.943	ENSMICG00000016741	NRDE2	90	79.943	Microcebus_murinus
ENSRNOG00000004004	Nrde2	99	87.285	ENSMOCG00000014472	Nrde2	91	87.285	Microtus_ochrogaster
ENSRNOG00000004004	Nrde2	76	48.900	ENSMMOG00000004703	nrde2	87	48.533	Mola_mola
ENSRNOG00000004004	Nrde2	99	66.759	ENSMODG00000002711	NRDE2	96	66.759	Monodelphis_domestica
ENSRNOG00000004004	Nrde2	87	47.216	ENSMALG00000021869	nrde2	84	47.003	Monopterus_albus
ENSRNOG00000004004	Nrde2	100	91.792	MGP_CAROLIEiJ_G0018020	Nrde2	91	91.792	Mus_caroli
ENSRNOG00000004004	Nrde2	100	90.952	ENSMUSG00000021179	Nrde2	91	91.046	Mus_musculus
ENSRNOG00000004004	Nrde2	100	91.509	MGP_PahariEiJ_G0029778	Nrde2	91	91.509	Mus_pahari
ENSRNOG00000004004	Nrde2	100	91.848	MGP_SPRETEiJ_G0018865	Nrde2	93	95.767	Mus_spretus
ENSRNOG00000004004	Nrde2	100	73.560	ENSMPUG00000008135	NRDE2	90	73.560	Mustela_putorius_furo
ENSRNOG00000004004	Nrde2	100	77.841	ENSMLUG00000007484	NRDE2	90	77.841	Myotis_lucifugus
ENSRNOG00000004004	Nrde2	100	82.925	ENSNGAG00000002993	Nrde2	90	82.925	Nannospalax_galili
ENSRNOG00000004004	Nrde2	86	47.128	ENSNBRG00000010184	nrde2	88	47.234	Neolamprologus_brichardi
ENSRNOG00000004004	Nrde2	100	79.754	ENSNLEG00000017032	NRDE2	94	79.754	Nomascus_leucogenys
ENSRNOG00000004004	Nrde2	74	61.923	ENSMEUG00000011097	NRDE2	68	61.941	Notamacropus_eugenii
ENSRNOG00000004004	Nrde2	57	74.007	ENSOPRG00000001375	-	52	74.007	Ochotona_princeps
ENSRNOG00000004004	Nrde2	98	78.668	ENSODEG00000012422	NRDE2	90	79.247	Octodon_degus
ENSRNOG00000004004	Nrde2	100	44.220	ENSONIG00000019512	nrde2	90	44.271	Oreochromis_niloticus
ENSRNOG00000004004	Nrde2	100	76.938	ENSOCUG00000010083	NRDE2	90	76.938	Oryctolagus_cuniculus
ENSRNOG00000004004	Nrde2	87	47.543	ENSORLG00000017730	nrde2	89	46.113	Oryzias_latipes
ENSRNOG00000004004	Nrde2	100	43.986	ENSORLG00020015965	nrde2	91	44.047	Oryzias_latipes_hni
ENSRNOG00000004004	Nrde2	100	43.011	ENSORLG00015012437	nrde2	91	43.599	Oryzias_latipes_hsok
ENSRNOG00000004004	Nrde2	100	44.374	ENSOMEG00000010890	nrde2	91	44.964	Oryzias_melastigma
ENSRNOG00000004004	Nrde2	100	78.565	ENSOGAG00000006624	NRDE2	90	78.565	Otolemur_garnettii
ENSRNOG00000004004	Nrde2	98	71.360	ENSOARG00000003475	NRDE2	91	71.553	Ovis_aries
ENSRNOG00000004004	Nrde2	98	79.633	ENSPPAG00000034133	NRDE2	88	82.382	Pan_paniscus
ENSRNOG00000004004	Nrde2	100	77.200	ENSPPRG00000006422	NRDE2	90	77.389	Panthera_pardus
ENSRNOG00000004004	Nrde2	100	77.105	ENSPTIG00000009989	NRDE2	90	77.294	Panthera_tigris_altaica
ENSRNOG00000004004	Nrde2	100	80.132	ENSPTRG00000023399	NRDE2	90	80.212	Pan_troglodytes
ENSRNOG00000004004	Nrde2	100	45.868	ENSPKIG00000009331	nrde2	90	45.564	Paramormyrops_kingsleyae
ENSRNOG00000004004	Nrde2	100	61.632	ENSPSIG00000005588	NRDE2	91	61.372	Pelodiscus_sinensis
ENSRNOG00000004004	Nrde2	86	45.134	ENSPMGG00000024089	nrde2	82	44.762	Periophthalmus_magnuspinnatus
ENSRNOG00000004004	Nrde2	100	88.407	ENSPEMG00000023707	Nrde2	91	88.407	Peromyscus_maniculatus_bairdii
ENSRNOG00000004004	Nrde2	60	44.528	ENSPMAG00000003270	-	99	44.012	Petromyzon_marinus
ENSRNOG00000004004	Nrde2	100	67.075	ENSPCIG00000018567	NRDE2	90	68.932	Phascolarctos_cinereus
ENSRNOG00000004004	Nrde2	100	43.756	ENSPFOG00000013217	nrde2	90	43.704	Poecilia_formosa
ENSRNOG00000004004	Nrde2	100	44.054	ENSPLAG00000022350	nrde2	90	44.004	Poecilia_latipinna
ENSRNOG00000004004	Nrde2	100	44.194	ENSPMEG00000000778	nrde2	90	44.144	Poecilia_mexicana
ENSRNOG00000004004	Nrde2	87	45.940	ENSPREG00000009066	nrde2	90	43.688	Poecilia_reticulata
ENSRNOG00000004004	Nrde2	82	79.608	ENSPPYG00000006245	NRDE2	88	79.608	Pongo_abelii
ENSRNOG00000004004	Nrde2	84	72.472	ENSPCAG00000016399	NRDE2	76	72.472	Procavia_capensis
ENSRNOG00000004004	Nrde2	100	79.659	ENSPCOG00000024684	NRDE2	96	79.659	Propithecus_coquereli
ENSRNOG00000004004	Nrde2	100	74.740	ENSPVAG00000010023	NRDE2	94	74.740	Pteropus_vampyrus
ENSRNOG00000004004	Nrde2	98	43.733	ENSPNYG00000022833	nrde2	83	48.439	Pundamilia_nyererei
ENSRNOG00000004004	Nrde2	86	49.345	ENSPNAG00000015807	nrde2	83	49.129	Pygocentrus_nattereri
ENSRNOG00000004004	Nrde2	100	78.808	ENSSBOG00000024346	NRDE2	90	78.808	Saimiri_boliviensis_boliviensis
ENSRNOG00000004004	Nrde2	100	68.019	ENSSHAG00000016736	NRDE2	88	68.019	Sarcophilus_harrisii
ENSRNOG00000004004	Nrde2	100	47.575	ENSSFOG00015011794	nrde2	90	47.481	Scleropages_formosus
ENSRNOG00000004004	Nrde2	100	44.246	ENSSMAG00000011671	nrde2	90	44.128	Scophthalmus_maximus
ENSRNOG00000004004	Nrde2	100	44.831	ENSSDUG00000017948	nrde2	90	45.714	Seriola_dumerili
ENSRNOG00000004004	Nrde2	88	47.708	ENSSLDG00000023798	nrde2	87	49.136	Seriola_lalandi_dorsalis
ENSRNOG00000004004	Nrde2	90	62.369	ENSSPUG00000006348	NRDE2	86	64.868	Sphenodon_punctatus
ENSRNOG00000004004	Nrde2	86	48.220	ENSSPAG00000000539	nrde2	88	48.771	Stegastes_partitus
ENSRNOG00000004004	Nrde2	100	78.733	ENSSSCG00000002434	NRDE2	90	78.733	Sus_scrofa
ENSRNOG00000004004	Nrde2	98	60.694	ENSTGUG00000012462	-	90	60.790	Taeniopygia_guttata
ENSRNOG00000004004	Nrde2	74	48.246	ENSTRUG00000002798	nrde2	84	47.995	Takifugu_rubripes
ENSRNOG00000004004	Nrde2	94	74.150	ENSTBEG00000011834	NRDE2	85	74.150	Tupaia_belangeri
ENSRNOG00000004004	Nrde2	100	77.105	ENSTTRG00000013583	NRDE2	90	77.105	Tursiops_truncatus
ENSRNOG00000004004	Nrde2	96	73.994	ENSUAMG00000004159	NRDE2	90	73.333	Ursus_americanus
ENSRNOG00000004004	Nrde2	96	74.412	ENSUMAG00000006393	NRDE2	97	76.702	Ursus_maritimus
ENSRNOG00000004004	Nrde2	100	75.585	ENSVVUG00000018202	NRDE2	91	76.052	Vulpes_vulpes
ENSRNOG00000004004	Nrde2	100	52.260	ENSXETG00000015708	nrde2	90	51.507	Xenopus_tropicalis
ENSRNOG00000004004	Nrde2	90	45.502	ENSXCOG00000013298	nrde2	83	46.790	Xiphophorus_couchianus
ENSRNOG00000004004	Nrde2	100	44.564	ENSXMAG00000009320	nrde2	91	44.104	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process
GO:0016246	RNA interference	21873635.	IBA	Process
GO:0031048	chromatin silencing by small RNA	21873635.	IBA	Process