EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004059 (Gene tree)
Gene ID: 298861
Gene Symbol: Ptrhd1
Alias: LOC298861|RGD1561792
Full Name: peptidyl-tRNA hydrolase domain containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 3386 bases
Position: chr6:28663602-28666987
Accession: 1561792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000005402	PTH2	PF01981.16	6.6e-24	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000005402	-	916	-	ENSRNOP00000005402	140 (aa)	-	D3ZBG6

Gene Model

Click here to download ENSRNOG00000004059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004059	Ptrhd1	100	87.143	ENSG00000184924	PTRHD1	100	87.143	Homo_sapiens
ENSRNOG00000004059	Ptrhd1	89	58.400	ENSAPOG00000024433	ptrhd1	98	58.400	Acanthochromis_polyacanthus
ENSRNOG00000004059	Ptrhd1	100	84.286	ENSAMEG00000002651	PTRHD1	100	84.286	Ailuropoda_melanoleuca
ENSRNOG00000004059	Ptrhd1	90	57.480	ENSACIG00000002596	ptrhd1	100	57.480	Amphilophus_citrinellus
ENSRNOG00000004059	Ptrhd1	89	58.400	ENSAOCG00000007632	ptrhd1	98	58.400	Amphiprion_ocellaris
ENSRNOG00000004059	Ptrhd1	89	58.400	ENSAPEG00000011491	ptrhd1	98	58.400	Amphiprion_percula
ENSRNOG00000004059	Ptrhd1	90	59.055	ENSATEG00000019199	ptrhd1	100	59.055	Anabas_testudineus
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSANAG00000019089	PTRHD1	100	85.714	Aotus_nancymaae
ENSRNOG00000004059	Ptrhd1	90	58.268	ENSACLG00000000814	ptrhd1	100	58.268	Astatotilapia_calliptera
ENSRNOG00000004059	Ptrhd1	89	58.871	ENSAMXG00000034266	ptrhd1	85	58.871	Astyanax_mexicanus
ENSRNOG00000004059	Ptrhd1	100	85.000	ENSBTAG00000015012	PTRHD1	100	85.000	Bos_taurus
ENSRNOG00000004059	Ptrhd1	81	45.614	WBGene00050885	Y94H6A.12	100	46.774	Caenorhabditis_elegans
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSCJAG00000008012	PTRHD1	100	85.714	Callithrix_jacchus
ENSRNOG00000004059	Ptrhd1	100	87.857	ENSCAFG00000024865	PTRHD1	100	87.857	Canis_familiaris
ENSRNOG00000004059	Ptrhd1	100	85.000	ENSCHIG00000014757	PTRHD1	100	85.000	Capra_hircus
ENSRNOG00000004059	Ptrhd1	100	85.000	ENSTSYG00000009995	PTRHD1	100	85.000	Carlito_syrichta
ENSRNOG00000004059	Ptrhd1	100	84.286	ENSCPOG00000005561	PTRHD1	100	84.286	Cavia_porcellus
ENSRNOG00000004059	Ptrhd1	100	86.429	ENSCCAG00000033856	PTRHD1	100	86.429	Cebus_capucinus
ENSRNOG00000004059	Ptrhd1	100	86.429	ENSCATG00000033690	PTRHD1	100	86.429	Cercocebus_atys
ENSRNOG00000004059	Ptrhd1	100	88.571	ENSCLAG00000006505	PTRHD1	97	88.571	Chinchilla_lanigera
ENSRNOG00000004059	Ptrhd1	100	87.143	ENSCSAG00000008490	PTRHD1	100	87.143	Chlorocebus_sabaeus
ENSRNOG00000004059	Ptrhd1	91	74.219	ENSCHOG00000001920	PTRHD1	93	74.219	Choloepus_hoffmanni
ENSRNOG00000004059	Ptrhd1	91	64.062	ENSCPBG00000022276	PTRHD1	91	64.062	Chrysemys_picta_bellii
ENSRNOG00000004059	Ptrhd1	83	54.310	ENSCING00000019647	-	97	54.310	Ciona_intestinalis
ENSRNOG00000004059	Ptrhd1	100	86.429	ENSCANG00000034444	PTRHD1	100	86.429	Colobus_angolensis_palliatus
ENSRNOG00000004059	Ptrhd1	100	90.000	ENSCGRG00001003289	Ptrhd1	66	90.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000004059	Ptrhd1	100	90.000	ENSCGRG00000011834	Ptrhd1	100	90.000	Cricetulus_griseus_crigri
ENSRNOG00000004059	Ptrhd1	90	58.594	ENSCSEG00000006943	ptrhd1	100	58.594	Cynoglossus_semilaevis
ENSRNOG00000004059	Ptrhd1	90	57.480	ENSCVAG00000016345	ptrhd1	100	57.480	Cyprinodon_variegatus
ENSRNOG00000004059	Ptrhd1	89	58.871	ENSDARG00000016122	ptrhd1	97	58.871	Danio_rerio
ENSRNOG00000004059	Ptrhd1	100	84.286	ENSDNOG00000043646	PTRHD1	93	84.286	Dasypus_novemcinctus
ENSRNOG00000004059	Ptrhd1	97	89.209	ENSDORG00000026776	Ptrhd1	96	90.226	Dipodomys_ordii
ENSRNOG00000004059	Ptrhd1	83	52.586	FBgn0038446	CG14903	97	52.586	Drosophila_melanogaster
ENSRNOG00000004059	Ptrhd1	60	78.571	ENSETEG00000001615	-	100	78.571	Echinops_telfairi
ENSRNOG00000004059	Ptrhd1	92	67.442	ENSETEG00000009379	-	96	67.442	Echinops_telfairi
ENSRNOG00000004059	Ptrhd1	83	61.207	ENSEBUG00000002249	ptrhd1	95	61.207	Eptatretus_burgeri
ENSRNOG00000004059	Ptrhd1	96	59.701	ENSEASG00005001302	-	95	56.716	Equus_asinus_asinus
ENSRNOG00000004059	Ptrhd1	91	62.992	ENSECAG00000005314	-	87	58.268	Equus_caballus
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSECAG00000017730	PTRHD1	100	85.714	Equus_caballus
ENSRNOG00000004059	Ptrhd1	100	82.857	ENSEEUG00000004263	PTRHD1	100	82.857	Erinaceus_europaeus
ENSRNOG00000004059	Ptrhd1	90	57.480	ENSELUG00000003837	ptrhd1	100	57.480	Esox_lucius
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSFCAG00000003648	PTRHD1	100	85.714	Felis_catus
ENSRNOG00000004059	Ptrhd1	100	87.857	ENSFDAG00000004017	PTRHD1	100	87.857	Fukomys_damarensis
ENSRNOG00000004059	Ptrhd1	89	58.065	ENSFHEG00000009135	ptrhd1	97	58.065	Fundulus_heteroclitus
ENSRNOG00000004059	Ptrhd1	83	59.483	ENSGALG00000016610	PTRHD1	88	56.000	Gallus_gallus
ENSRNOG00000004059	Ptrhd1	89	56.452	ENSGAFG00000005717	ptrhd1	97	56.452	Gambusia_affinis
ENSRNOG00000004059	Ptrhd1	90	56.349	ENSGACG00000006743	ptrhd1	98	56.349	Gasterosteus_aculeatus
ENSRNOG00000004059	Ptrhd1	89	65.600	ENSGAGG00000023951	PTRHD1	98	65.600	Gopherus_agassizii
ENSRNOG00000004059	Ptrhd1	90	91.270	ENSGGOG00000043870	PTRHD1	100	91.270	Gorilla_gorilla
ENSRNOG00000004059	Ptrhd1	90	58.268	ENSHBUG00000014289	ptrhd1	100	58.268	Haplochromis_burtoni
ENSRNOG00000004059	Ptrhd1	100	82.857	ENSHGLG00000008203	PTRHD1	100	82.857	Heterocephalus_glaber_female
ENSRNOG00000004059	Ptrhd1	100	82.143	ENSHGLG00100012553	PTRHD1	100	82.143	Heterocephalus_glaber_male
ENSRNOG00000004059	Ptrhd1	91	86.614	ENSHGLG00100004341	-	93	86.614	Heterocephalus_glaber_male
ENSRNOG00000004059	Ptrhd1	90	57.031	ENSHCOG00000013504	ptrhd1	100	57.031	Hippocampus_comes
ENSRNOG00000004059	Ptrhd1	83	57.759	ENSIPUG00000004885	ptrhd1	97	57.759	Ictalurus_punctatus
ENSRNOG00000004059	Ptrhd1	100	87.857	ENSSTOG00000006030	PTRHD1	100	87.857	Ictidomys_tridecemlineatus
ENSRNOG00000004059	Ptrhd1	95	86.466	ENSJJAG00000024180	Ptrhd1	96	86.466	Jaculus_jaculus
ENSRNOG00000004059	Ptrhd1	81	57.522	ENSKMAG00000016961	ptrhd1	99	57.522	Kryptolebias_marmoratus
ENSRNOG00000004059	Ptrhd1	90	57.480	ENSLBEG00000024406	ptrhd1	100	57.480	Labrus_bergylta
ENSRNOG00000004059	Ptrhd1	81	58.772	ENSLACG00000018052	PTRHD1	95	56.800	Latimeria_chalumnae
ENSRNOG00000004059	Ptrhd1	93	57.692	ENSLOCG00000015890	ptrhd1	100	57.692	Lepisosteus_oculatus
ENSRNOG00000004059	Ptrhd1	100	85.000	ENSLAFG00000014453	PTRHD1	100	85.000	Loxodonta_africana
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSMFAG00000040267	PTRHD1	100	85.714	Macaca_fascicularis
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSMMUG00000009598	PTRHD1	100	85.714	Macaca_mulatta
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSMNEG00000035044	PTRHD1	100	85.714	Macaca_nemestrina
ENSRNOG00000004059	Ptrhd1	100	84.286	ENSMLEG00000030314	PTRHD1	100	84.286	Mandrillus_leucophaeus
ENSRNOG00000004059	Ptrhd1	90	55.118	ENSMAMG00000021201	ptrhd1	100	55.118	Mastacembelus_armatus
ENSRNOG00000004059	Ptrhd1	90	58.268	ENSMZEG00005021808	ptrhd1	100	58.268	Maylandia_zebra
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSMAUG00000019251	Ptrhd1	100	85.714	Mesocricetus_auratus
ENSRNOG00000004059	Ptrhd1	100	84.286	ENSMICG00000001578	PTRHD1	100	84.286	Microcebus_murinus
ENSRNOG00000004059	Ptrhd1	100	90.000	ENSMOCG00000001204	Ptrhd1	100	90.000	Microtus_ochrogaster
ENSRNOG00000004059	Ptrhd1	90	56.693	ENSMMOG00000015284	ptrhd1	100	56.693	Mola_mola
ENSRNOG00000004059	Ptrhd1	89	71.774	ENSMODG00000015895	PTRHD1	91	71.774	Monodelphis_domestica
ENSRNOG00000004059	Ptrhd1	90	55.118	ENSMALG00000003471	ptrhd1	100	55.118	Monopterus_albus
ENSRNOG00000004059	Ptrhd1	100	96.429	MGP_CAROLIEiJ_G0017582	Ptrhd1	100	96.429	Mus_caroli
ENSRNOG00000004059	Ptrhd1	100	96.429	ENSMUSG00000096199	Ptrhd1	100	96.429	Mus_musculus
ENSRNOG00000004059	Ptrhd1	100	96.429	MGP_SPRETEiJ_G0018426	Ptrhd1	100	96.429	Mus_spretus
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSMPUG00000014016	PTRHD1	100	85.714	Mustela_putorius_furo
ENSRNOG00000004059	Ptrhd1	100	81.429	ENSMLUG00000014127	PTRHD1	100	81.429	Myotis_lucifugus
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSNGAG00000016335	Ptrhd1	100	85.714	Nannospalax_galili
ENSRNOG00000004059	Ptrhd1	90	58.268	ENSNBRG00000009690	ptrhd1	100	58.268	Neolamprologus_brichardi
ENSRNOG00000004059	Ptrhd1	100	87.143	ENSNLEG00000000990	PTRHD1	100	87.143	Nomascus_leucogenys
ENSRNOG00000004059	Ptrhd1	52	73.973	ENSMEUG00000010482	-	88	73.973	Notamacropus_eugenii
ENSRNOG00000004059	Ptrhd1	100	78.571	ENSOPRG00000008600	PTRHD1	100	78.571	Ochotona_princeps
ENSRNOG00000004059	Ptrhd1	100	86.429	ENSODEG00000007805	PTRHD1	97	86.429	Octodon_degus
ENSRNOG00000004059	Ptrhd1	96	56.618	ENSONIG00000015722	ptrhd1	99	57.037	Oreochromis_niloticus
ENSRNOG00000004059	Ptrhd1	100	81.429	ENSOCUG00000015432	PTRHD1	100	81.429	Oryctolagus_cuniculus
ENSRNOG00000004059	Ptrhd1	83	56.410	ENSORLG00000028768	ptrhd1	98	56.410	Oryzias_latipes
ENSRNOG00000004059	Ptrhd1	83	57.265	ENSORLG00020002857	ptrhd1	98	57.265	Oryzias_latipes_hni
ENSRNOG00000004059	Ptrhd1	83	56.410	ENSORLG00015018271	ptrhd1	99	56.410	Oryzias_latipes_hsok
ENSRNOG00000004059	Ptrhd1	90	54.688	ENSOMEG00000017594	ptrhd1	100	54.688	Oryzias_melastigma
ENSRNOG00000004059	Ptrhd1	100	77.857	ENSOGAG00000000756	PTRHD1	100	77.857	Otolemur_garnettii
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSOARG00000018052	PTRHD1	100	85.714	Ovis_aries
ENSRNOG00000004059	Ptrhd1	100	87.143	ENSPPAG00000035395	PTRHD1	100	87.143	Pan_paniscus
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSPPRG00000022961	PTRHD1	100	85.714	Panthera_pardus
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSPTIG00000012136	PTRHD1	100	85.714	Panthera_tigris_altaica
ENSRNOG00000004059	Ptrhd1	100	87.143	ENSPTRG00000011716	PTRHD1	100	87.143	Pan_troglodytes
ENSRNOG00000004059	Ptrhd1	100	86.429	ENSPANG00000006781	PTRHD1	100	86.429	Papio_anubis
ENSRNOG00000004059	Ptrhd1	83	59.483	ENSPKIG00000015207	ptrhd1	78	59.483	Paramormyrops_kingsleyae
ENSRNOG00000004059	Ptrhd1	83	60.345	ENSPMGG00000020297	ptrhd1	100	58.268	Periophthalmus_magnuspinnatus
ENSRNOG00000004059	Ptrhd1	75	59.048	ENSPMAG00000007352	ptrhd1	91	58.621	Petromyzon_marinus
ENSRNOG00000004059	Ptrhd1	84	75.424	ENSPCIG00000025242	PTRHD1	94	75.424	Phascolarctos_cinereus
ENSRNOG00000004059	Ptrhd1	96	54.412	ENSPFOG00000004468	ptrhd1	96	54.412	Poecilia_formosa
ENSRNOG00000004059	Ptrhd1	89	56.452	ENSPLAG00000018019	ptrhd1	97	56.452	Poecilia_latipinna
ENSRNOG00000004059	Ptrhd1	89	56.452	ENSPMEG00000001321	ptrhd1	97	56.452	Poecilia_mexicana
ENSRNOG00000004059	Ptrhd1	89	56.452	ENSPREG00000017624	ptrhd1	97	56.452	Poecilia_reticulata
ENSRNOG00000004059	Ptrhd1	100	85.000	ENSPPYG00000012597	PTRHD1	100	85.000	Pongo_abelii
ENSRNOG00000004059	Ptrhd1	100	82.857	ENSPCAG00000007535	PTRHD1	100	82.857	Procavia_capensis
ENSRNOG00000004059	Ptrhd1	100	84.286	ENSPCOG00000003110	PTRHD1	100	84.286	Propithecus_coquereli
ENSRNOG00000004059	Ptrhd1	100	83.571	ENSPVAG00000017514	PTRHD1	100	83.571	Pteropus_vampyrus
ENSRNOG00000004059	Ptrhd1	90	58.268	ENSPNYG00000016755	ptrhd1	100	58.268	Pundamilia_nyererei
ENSRNOG00000004059	Ptrhd1	89	57.258	ENSPNAG00000028214	ptrhd1	97	57.258	Pygocentrus_nattereri
ENSRNOG00000004059	Ptrhd1	100	87.143	ENSRBIG00000032190	PTRHD1	100	87.143	Rhinopithecus_bieti
ENSRNOG00000004059	Ptrhd1	100	87.143	ENSRROG00000029627	PTRHD1	100	87.143	Rhinopithecus_roxellana
ENSRNOG00000004059	Ptrhd1	100	85.714	ENSSBOG00000031751	PTRHD1	100	85.714	Saimiri_boliviensis_boliviensis
ENSRNOG00000004059	Ptrhd1	91	72.441	ENSSHAG00000005774	PTRHD1	82	72.441	Sarcophilus_harrisii
ENSRNOG00000004059	Ptrhd1	83	57.759	ENSSFOG00015000526	ptrhd1	94	57.759	Scleropages_formosus
ENSRNOG00000004059	Ptrhd1	83	58.621	ENSSMAG00000004450	ptrhd1	97	56.452	Scophthalmus_maximus
ENSRNOG00000004059	Ptrhd1	91	58.594	ENSSDUG00000004610	ptrhd1	85	58.594	Seriola_dumerili
ENSRNOG00000004059	Ptrhd1	90	59.055	ENSSLDG00000006231	ptrhd1	100	59.055	Seriola_lalandi_dorsalis
ENSRNOG00000004059	Ptrhd1	84	69.231	ENSSPUG00000002905	PTRHD1	94	66.400	Sphenodon_punctatus
ENSRNOG00000004059	Ptrhd1	89	58.400	ENSSPAG00000000997	ptrhd1	98	58.400	Stegastes_partitus
ENSRNOG00000004059	Ptrhd1	94	61.069	ENSSSCG00000040441	-	99	61.069	Sus_scrofa
ENSRNOG00000004059	Ptrhd1	84	58.120	ENSTGUG00000015169	-	85	58.120	Taeniopygia_guttata
ENSRNOG00000004059	Ptrhd1	90	55.118	ENSTRUG00000007201	ptrhd1	100	55.118	Takifugu_rubripes
ENSRNOG00000004059	Ptrhd1	90	57.480	ENSTNIG00000019143	ptrhd1	100	57.480	Tetraodon_nigroviridis
ENSRNOG00000004059	Ptrhd1	100	75.714	ENSTTRG00000015128	PTRHD1	100	75.714	Tursiops_truncatus
ENSRNOG00000004059	Ptrhd1	100	87.143	ENSUAMG00000007305	PTRHD1	100	87.143	Ursus_americanus
ENSRNOG00000004059	Ptrhd1	100	86.429	ENSVPAG00000005556	PTRHD1	100	86.429	Vicugna_pacos
ENSRNOG00000004059	Ptrhd1	75	73.333	ENSXETG00000021176	ptrhd1	83	72.414	Xenopus_tropicalis
ENSRNOG00000004059	Ptrhd1	89	56.452	ENSXCOG00000019083	ptrhd1	97	56.452	Xiphophorus_couchianus
ENSRNOG00000004059	Ptrhd1	89	56.452	ENSXMAG00000024458	ptrhd1	97	56.452	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004045	aminoacyl-tRNA hydrolase activity	-	IEA	Function