EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004091 (Gene tree)
Gene ID: 360613
Gene Symbol: Cwc25
Alias: Ccdc49|LOC360613|RGD1305258
Full Name: CWC25 spliceosome-associated protein homolog
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 24671 bases
Position: chr10:85684898-85709568
Accession: 1305258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000005426	CWC25	PF12542.8	1.3e-19	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000005426	-	3199	-	ENSRNOP00000005426	415 (aa)	-	G3V6I3

Gene Model

Click here to download ENSRNOG00000004091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004091's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004091	Cwc25	100	87.765	ENSG00000273559	CWC25	94	100.000	Homo_sapiens
ENSRNOG00000004091	Cwc25	100	84.000	ENSAMEG00000004292	CWC25	100	84.471	Ailuropoda_melanoleuca
ENSRNOG00000004091	Cwc25	100	51.242	ENSATEG00000000799	cwc25	100	53.630	Anabas_testudineus
ENSRNOG00000004091	Cwc25	99	67.217	ENSAPLG00000003710	CWC25	99	68.000	Anas_platyrhynchos
ENSRNOG00000004091	Cwc25	100	68.095	ENSACAG00000013140	CWC25	100	66.110	Anolis_carolinensis
ENSRNOG00000004091	Cwc25	100	70.361	ENSANAG00000033550	CWC25	91	86.580	Aotus_nancymaae
ENSRNOG00000004091	Cwc25	100	51.020	ENSACLG00000009352	cwc25	100	53.630	Astatotilapia_calliptera
ENSRNOG00000004091	Cwc25	99	50.119	ENSAMXG00000035125	cwc25	100	51.442	Astyanax_mexicanus
ENSRNOG00000004091	Cwc25	100	87.059	ENSBTAG00000030591	CWC25	100	87.529	Bos_taurus
ENSRNOG00000004091	Cwc25	100	84.706	ENSCJAG00000008289	CWC25	100	85.412	Callithrix_jacchus
ENSRNOG00000004091	Cwc25	100	82.824	ENSCAFG00000016561	CWC25	100	83.294	Canis_familiaris
ENSRNOG00000004091	Cwc25	100	82.824	ENSCAFG00020023017	CWC25	100	83.294	Canis_lupus_dingo
ENSRNOG00000004091	Cwc25	100	86.588	ENSCHIG00000015063	CWC25	100	87.059	Capra_hircus
ENSRNOG00000004091	Cwc25	100	78.638	ENSTSYG00000011332	CWC25	100	79.577	Carlito_syrichta
ENSRNOG00000004091	Cwc25	99	76.190	ENSCAPG00000014542	CWC25	99	78.014	Cavia_aperea
ENSRNOG00000004091	Cwc25	100	78.571	ENSCPOG00000015127	CWC25	100	77.778	Cavia_porcellus
ENSRNOG00000004091	Cwc25	100	85.613	ENSCCAG00000028719	CWC25	100	86.085	Cebus_capucinus
ENSRNOG00000004091	Cwc25	100	82.670	ENSCATG00000040771	CWC25	100	83.529	Cercocebus_atys
ENSRNOG00000004091	Cwc25	100	78.095	ENSCLAG00000017102	CWC25	87	97.902	Chinchilla_lanigera
ENSRNOG00000004091	Cwc25	100	87.294	ENSCSAG00000002654	CWC25	100	87.059	Chlorocebus_sabaeus
ENSRNOG00000004091	Cwc25	99	73.397	ENSCPBG00000027490	CWC25	88	73.397	Chrysemys_picta_bellii
ENSRNOG00000004091	Cwc25	100	81.967	ENSCANG00000037099	CWC25	100	82.824	Colobus_angolensis_palliatus
ENSRNOG00000004091	Cwc25	100	92.124	ENSCGRG00001020785	Cwc25	100	92.840	Cricetulus_griseus_chok1gshd
ENSRNOG00000004091	Cwc25	100	92.124	ENSCGRG00000005085	Cwc25	100	92.840	Cricetulus_griseus_crigri
ENSRNOG00000004091	Cwc25	100	51.157	ENSCSEG00000016305	cwc25	100	52.668	Cynoglossus_semilaevis
ENSRNOG00000004091	Cwc25	100	51.011	ENSCVAG00000007828	cwc25	100	53.953	Cyprinodon_variegatus
ENSRNOG00000004091	Cwc25	100	53.972	ENSDARG00000003382	cwc25	100	53.571	Danio_rerio
ENSRNOG00000004091	Cwc25	100	85.915	ENSDNOG00000042410	CWC25	100	86.620	Dasypus_novemcinctus
ENSRNOG00000004091	Cwc25	100	87.678	ENSDORG00000003061	Cwc25	100	88.389	Dipodomys_ordii
ENSRNOG00000004091	Cwc25	64	41.451	FBgn0031452	Cwc25	54	41.489	Drosophila_melanogaster
ENSRNOG00000004091	Cwc25	100	47.418	ENSEBUG00000002947	cwc25	82	62.676	Eptatretus_burgeri
ENSRNOG00000004091	Cwc25	100	86.353	ENSEASG00005001871	CWC25	100	87.059	Equus_asinus_asinus
ENSRNOG00000004091	Cwc25	100	86.588	ENSECAG00000019122	CWC25	100	87.294	Equus_caballus
ENSRNOG00000004091	Cwc25	75	70.898	ENSEEUG00000000018	CWC25	100	72.222	Erinaceus_europaeus
ENSRNOG00000004091	Cwc25	100	84.000	ENSFCAG00000028119	CWC25	100	84.471	Felis_catus
ENSRNOG00000004091	Cwc25	99	59.016	ENSFALG00000013293	CWC25	99	58.451	Ficedula_albicollis
ENSRNOG00000004091	Cwc25	100	74.408	ENSFDAG00000007745	CWC25	100	74.645	Fukomys_damarensis
ENSRNOG00000004091	Cwc25	100	54.567	ENSFHEG00000004754	cwc25	100	53.630	Fundulus_heteroclitus
ENSRNOG00000004091	Cwc25	64	72.152	ENSGMOG00000013001	cwc25	65	71.687	Gadus_morhua
ENSRNOG00000004091	Cwc25	100	71.529	ENSGALG00000001624	CWC25	100	72.066	Gallus_gallus
ENSRNOG00000004091	Cwc25	100	73.770	ENSGAGG00000022972	CWC25	100	73.131	Gopherus_agassizii
ENSRNOG00000004091	Cwc25	100	87.294	ENSGGOG00000007083	CWC25	100	88.000	Gorilla_gorilla
ENSRNOG00000004091	Cwc25	100	50.000	ENSHBUG00000001392	cwc25	100	53.630	Haplochromis_burtoni
ENSRNOG00000004091	Cwc25	100	77.488	ENSHGLG00000014785	CWC25	100	77.283	Heterocephalus_glaber_female
ENSRNOG00000004091	Cwc25	100	75.765	ENSHGLG00100017354	CWC25	100	75.349	Heterocephalus_glaber_male
ENSRNOG00000004091	Cwc25	100	53.882	ENSIPUG00000012581	CWC25	100	52.358	Ictalurus_punctatus
ENSRNOG00000004091	Cwc25	100	87.059	ENSSTOG00000014268	CWC25	100	88.000	Ictidomys_tridecemlineatus
ENSRNOG00000004091	Cwc25	100	50.113	ENSKMAG00000015418	cwc25	99	53.864	Kryptolebias_marmoratus
ENSRNOG00000004091	Cwc25	85	51.549	ENSLACG00000001743	CWC25	100	51.130	Latimeria_chalumnae
ENSRNOG00000004091	Cwc25	100	53.953	ENSLOCG00000013707	cwc25	100	54.462	Lepisosteus_oculatus
ENSRNOG00000004091	Cwc25	100	84.561	ENSLAFG00000002238	CWC25	100	85.273	Loxodonta_africana
ENSRNOG00000004091	Cwc25	85	85.873	ENSMFAG00000002357	CWC25	100	86.427	Macaca_fascicularis
ENSRNOG00000004091	Cwc25	85	85.873	ENSMMUG00000002944	CWC25	90	86.427	Macaca_mulatta
ENSRNOG00000004091	Cwc25	100	88.000	ENSMNEG00000033729	CWC25	100	88.471	Macaca_nemestrina
ENSRNOG00000004091	Cwc25	91	87.339	ENSMLEG00000033355	CWC25	99	87.855	Mandrillus_leucophaeus
ENSRNOG00000004091	Cwc25	100	53.756	ENSMAMG00000005194	cwc25	100	53.412	Mastacembelus_armatus
ENSRNOG00000004091	Cwc25	100	51.020	ENSMZEG00005012421	cwc25	100	53.630	Maylandia_zebra
ENSRNOG00000004091	Cwc25	99	70.657	ENSMGAG00000005158	CWC25	99	70.726	Meleagris_gallopavo
ENSRNOG00000004091	Cwc25	100	87.765	ENSMICG00000003004	CWC25	100	88.471	Microcebus_murinus
ENSRNOG00000004091	Cwc25	100	91.647	ENSMOCG00000000224	Cwc25	100	92.363	Microtus_ochrogaster
ENSRNOG00000004091	Cwc25	100	79.059	ENSMODG00000012627	CWC25	100	80.000	Monodelphis_domestica
ENSRNOG00000004091	Cwc25	100	55.711	ENSMALG00000005638	cwc25	100	54.545	Monopterus_albus
ENSRNOG00000004091	Cwc25	100	91.346	MGP_CAROLIEiJ_G0017064	Cwc25	100	91.827	Mus_caroli
ENSRNOG00000004091	Cwc25	100	93.750	ENSMUSG00000018541	Cwc25	100	94.471	Mus_musculus
ENSRNOG00000004091	Cwc25	100	91.607	MGP_PahariEiJ_G0018193	Cwc25	100	91.127	Mus_pahari
ENSRNOG00000004091	Cwc25	100	93.510	MGP_SPRETEiJ_G0017910	Cwc25	100	94.231	Mus_spretus
ENSRNOG00000004091	Cwc25	100	83.765	ENSMPUG00000015077	CWC25	100	83.765	Mustela_putorius_furo
ENSRNOG00000004091	Cwc25	100	86.353	ENSMLUG00000029653	CWC25	100	86.824	Myotis_lucifugus
ENSRNOG00000004091	Cwc25	100	87.470	ENSNGAG00000007394	Cwc25	100	87.470	Nannospalax_galili
ENSRNOG00000004091	Cwc25	100	87.059	ENSNLEG00000000617	CWC25	100	87.765	Nomascus_leucogenys
ENSRNOG00000004091	Cwc25	99	79.475	ENSMEUG00000004156	CWC25	100	79.714	Notamacropus_eugenii
ENSRNOG00000004091	Cwc25	85	68.333	ENSOPRG00000001941	CWC25	100	69.444	Ochotona_princeps
ENSRNOG00000004091	Cwc25	100	79.137	ENSODEG00000017487	CWC25	100	79.245	Octodon_degus
ENSRNOG00000004091	Cwc25	100	49.774	ENSONIG00000003251	cwc25	100	53.953	Oreochromis_niloticus
ENSRNOG00000004091	Cwc25	91	69.091	ENSOANG00000001231	-	100	69.091	Ornithorhynchus_anatinus
ENSRNOG00000004091	Cwc25	100	84.471	ENSOCUG00000013906	CWC25	100	84.941	Oryctolagus_cuniculus
ENSRNOG00000004091	Cwc25	100	52.370	ENSORLG00000018569	cwc25	100	52.123	Oryzias_latipes
ENSRNOG00000004091	Cwc25	100	52.969	ENSORLG00020012087	cwc25	100	52.246	Oryzias_latipes_hni
ENSRNOG00000004091	Cwc25	100	51.896	ENSORLG00015011062	cwc25	100	51.651	Oryzias_latipes_hsok
ENSRNOG00000004091	Cwc25	100	51.313	ENSOMEG00000019365	cwc25	100	51.659	Oryzias_melastigma
ENSRNOG00000004091	Cwc25	100	77.435	ENSOGAG00000008785	CWC25	100	78.066	Otolemur_garnettii
ENSRNOG00000004091	Cwc25	100	86.353	ENSOARG00000009937	CWC25	100	86.824	Ovis_aries
ENSRNOG00000004091	Cwc25	100	87.765	ENSPPAG00000023487	CWC25	100	88.471	Pan_paniscus
ENSRNOG00000004091	Cwc25	100	84.235	ENSPPRG00000005029	CWC25	100	84.706	Panthera_pardus
ENSRNOG00000004091	Cwc25	100	84.235	ENSPTIG00000020264	CWC25	100	84.706	Panthera_tigris_altaica
ENSRNOG00000004091	Cwc25	100	87.529	ENSPTRG00000009077	CWC25	100	88.235	Pan_troglodytes
ENSRNOG00000004091	Cwc25	100	87.765	ENSPANG00000022017	CWC25	100	88.235	Papio_anubis
ENSRNOG00000004091	Cwc25	100	49.654	ENSPKIG00000007116	cwc25	100	48.499	Paramormyrops_kingsleyae
ENSRNOG00000004091	Cwc25	87	68.883	ENSPSIG00000011817	CWC25	99	67.742	Pelodiscus_sinensis
ENSRNOG00000004091	Cwc25	100	89.713	ENSPEMG00000000026	Cwc25	100	90.431	Peromyscus_maniculatus_bairdii
ENSRNOG00000004091	Cwc25	100	79.529	ENSPCIG00000002943	CWC25	100	79.529	Phascolarctos_cinereus
ENSRNOG00000004091	Cwc25	100	53.147	ENSPFOG00000017152	cwc25	100	52.336	Poecilia_formosa
ENSRNOG00000004091	Cwc25	96	51.332	ENSPLAG00000004535	cwc25	100	50.605	Poecilia_latipinna
ENSRNOG00000004091	Cwc25	100	53.271	ENSPMEG00000023752	cwc25	100	53.271	Poecilia_mexicana
ENSRNOG00000004091	Cwc25	100	86.824	ENSPPYG00000008503	CWC25	100	87.529	Pongo_abelii
ENSRNOG00000004091	Cwc25	89	78.329	ENSPCAG00000000433	CWC25	100	77.546	Procavia_capensis
ENSRNOG00000004091	Cwc25	100	87.294	ENSPCOG00000023678	CWC25	100	88.000	Propithecus_coquereli
ENSRNOG00000004091	Cwc25	99	86.396	ENSPVAG00000002273	CWC25	100	86.874	Pteropus_vampyrus
ENSRNOG00000004091	Cwc25	100	51.981	ENSPNAG00000028668	cwc25	100	51.294	Pygocentrus_nattereri
ENSRNOG00000004091	Cwc25	100	87.294	ENSRBIG00000033457	CWC25	100	87.765	Rhinopithecus_bieti
ENSRNOG00000004091	Cwc25	100	87.765	ENSRROG00000039968	CWC25	100	88.235	Rhinopithecus_roxellana
ENSRNOG00000004091	Cwc25	100	81.176	ENSSHAG00000017267	CWC25	100	81.412	Sarcophilus_harrisii
ENSRNOG00000004091	Cwc25	100	54.436	ENSSFOG00015003449	cwc25	100	53.318	Scleropages_formosus
ENSRNOG00000004091	Cwc25	100	51.740	ENSSMAG00000010953	cwc25	100	52.103	Scophthalmus_maximus
ENSRNOG00000004091	Cwc25	100	50.336	ENSSDUG00000004302	cwc25	100	53.953	Seriola_dumerili
ENSRNOG00000004091	Cwc25	100	49.888	ENSSLDG00000005761	cwc25	100	53.488	Seriola_lalandi_dorsalis
ENSRNOG00000004091	Cwc25	85	73.130	ENSSARG00000006871	CWC25	100	77.072	Sorex_araneus
ENSRNOG00000004091	Cwc25	100	71.132	ENSSPUG00000018024	CWC25	100	72.430	Sphenodon_punctatus
ENSRNOG00000004091	Cwc25	100	84.941	ENSSSCG00000021478	CWC25	100	85.412	Sus_scrofa
ENSRNOG00000004091	Cwc25	99	64.066	ENSTGUG00000003011	CWC25	100	62.353	Taeniopygia_guttata
ENSRNOG00000004091	Cwc25	100	52.914	ENSTRUG00000004650	cwc25	100	53.882	Takifugu_rubripes
ENSRNOG00000004091	Cwc25	100	50.228	ENSTNIG00000014143	cwc25	100	51.651	Tetraodon_nigroviridis
ENSRNOG00000004091	Cwc25	99	73.508	ENSTBEG00000013187	CWC25	100	73.508	Tupaia_belangeri
ENSRNOG00000004091	Cwc25	99	85.442	ENSTTRG00000006662	CWC25	100	85.919	Tursiops_truncatus
ENSRNOG00000004091	Cwc25	100	84.235	ENSUAMG00000005592	CWC25	100	84.941	Ursus_americanus
ENSRNOG00000004091	Cwc25	100	84.000	ENSUMAG00000017097	CWC25	100	84.706	Ursus_maritimus
ENSRNOG00000004091	Cwc25	99	76.386	ENSVPAG00000005680	CWC25	100	76.386	Vicugna_pacos
ENSRNOG00000004091	Cwc25	100	82.824	ENSVVUG00000002182	CWC25	100	83.294	Vulpes_vulpes
ENSRNOG00000004091	Cwc25	99	60.291	ENSXETG00000023722	cwc25	100	60.775	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component