EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004247 (Gene tree)
Gene ID: 287273
Gene Symbol: Nhp2
Alias: LOC100910210|LOC287273|Nola2
Full Name: NHP2 ribonucleoprotein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 3375 bases
Position: chr10:34975708-34979082
Accession: 1309435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000063697	Ribosomal_L7Ae	PF01248.26	1.1e-23	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000064984	-	666	XM_003750818	ENSRNOP00000063697	121 (aa)	XP_003750866	D3ZVC6

Gene Model

Click here to download ENSRNOG00000004247's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000004247	Nhp2	81	39.252	ENSRNOG00000025154	LOC100359574	84	39.252
ENSRNOG00000004247	Nhp2	100	100.000	ENSRNOG00000049622	LOC103690013	100	100.000
ENSRNOG00000004247	Nhp2	81	39.252	ENSRNOG00000005681	AABR07042323.1	84	39.252
ENSRNOG00000004247	Nhp2	81	39.252	ENSRNOG00000006762	Snu13	84	39.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004247	Nhp2	89	93.519	ENSG00000145912	NHP2	69	98.305	Homo_sapiens
ENSRNOG00000004247	Nhp2	89	75.000	ENSAPOG00000004742	nhp2	71	75.000	Acanthochromis_polyacanthus
ENSRNOG00000004247	Nhp2	89	92.593	ENSAMEG00000006471	NHP2	71	92.593	Ailuropoda_melanoleuca
ENSRNOG00000004247	Nhp2	96	73.276	ENSACIG00000007968	nhp2	73	73.276	Amphilophus_citrinellus
ENSRNOG00000004247	Nhp2	89	75.000	ENSAOCG00000016311	nhp2	71	75.000	Amphiprion_ocellaris
ENSRNOG00000004247	Nhp2	89	75.000	ENSAPEG00000008765	nhp2	71	75.000	Amphiprion_percula
ENSRNOG00000004247	Nhp2	79	80.000	ENSATEG00000009651	nhp2	70	78.704	Anabas_testudineus
ENSRNOG00000004247	Nhp2	89	84.259	ENSACAG00000006692	NHP2	71	84.259	Anolis_carolinensis
ENSRNOG00000004247	Nhp2	89	77.778	ENSANAG00000031552	-	83	77.778	Aotus_nancymaae
ENSRNOG00000004247	Nhp2	89	92.593	ENSANAG00000023290	NHP2	71	92.593	Aotus_nancymaae
ENSRNOG00000004247	Nhp2	79	77.895	ENSACLG00000001082	nhp2	70	76.852	Astatotilapia_calliptera
ENSRNOG00000004247	Nhp2	89	79.630	ENSAMXG00000005845	nhp2	72	79.630	Astyanax_mexicanus
ENSRNOG00000004247	Nhp2	89	92.593	ENSBTAG00000006374	NHP2	71	92.593	Bos_taurus
ENSRNOG00000004247	Nhp2	86	48.571	WBGene00012964	Y48A6B.3	64	48.571	Caenorhabditis_elegans
ENSRNOG00000004247	Nhp2	89	92.593	ENSCJAG00000038564	-	71	92.593	Callithrix_jacchus
ENSRNOG00000004247	Nhp2	87	93.333	ENSCJAG00000023093	-	69	93.333	Callithrix_jacchus
ENSRNOG00000004247	Nhp2	89	92.593	ENSCAFG00000000240	NHP2	71	92.593	Canis_familiaris
ENSRNOG00000004247	Nhp2	89	92.593	ENSCHIG00000015159	NHP2	71	92.593	Capra_hircus
ENSRNOG00000004247	Nhp2	100	59.542	ENSTSYG00000008150	NHP2	100	59.542	Carlito_syrichta
ENSRNOG00000004247	Nhp2	89	93.519	ENSCPOG00000033753	NHP2	71	93.519	Cavia_porcellus
ENSRNOG00000004247	Nhp2	89	92.593	ENSCCAG00000034815	NHP2	71	92.593	Cebus_capucinus
ENSRNOG00000004247	Nhp2	89	84.259	ENSCCAG00000027964	-	73	84.259	Cebus_capucinus
ENSRNOG00000004247	Nhp2	89	76.852	ENSCCAG00000034664	-	73	76.852	Cebus_capucinus
ENSRNOG00000004247	Nhp2	89	93.519	ENSCATG00000043608	NHP2	71	93.519	Cercocebus_atys
ENSRNOG00000004247	Nhp2	89	90.741	ENSCLAG00000016005	NHP2	71	90.741	Chinchilla_lanigera
ENSRNOG00000004247	Nhp2	89	93.519	ENSCSAG00000008690	NHP2	71	93.519	Chlorocebus_sabaeus
ENSRNOG00000004247	Nhp2	89	91.667	ENSCHOG00000013038	NHP2	71	91.667	Choloepus_hoffmanni
ENSRNOG00000004247	Nhp2	89	80.556	ENSCPBG00000022106	NHP2	72	80.556	Chrysemys_picta_bellii
ENSRNOG00000004247	Nhp2	88	62.264	ENSCSAVG00000008036	-	70	62.264	Ciona_savignyi
ENSRNOG00000004247	Nhp2	83	87.000	ENSCANG00000038441	-	80	95.455	Colobus_angolensis_palliatus
ENSRNOG00000004247	Nhp2	89	93.519	ENSCANG00000031562	NHP2	71	93.519	Colobus_angolensis_palliatus
ENSRNOG00000004247	Nhp2	100	77.124	ENSCGRG00001005326	Nhp2	100	77.124	Cricetulus_griseus_chok1gshd
ENSRNOG00000004247	Nhp2	100	77.124	ENSCGRG00000013680	Nhp2	100	77.124	Cricetulus_griseus_crigri
ENSRNOG00000004247	Nhp2	89	78.704	ENSCSEG00000006761	nhp2	70	78.704	Cynoglossus_semilaevis
ENSRNOG00000004247	Nhp2	89	74.074	ENSDARG00000069422	nhp2	72	74.074	Danio_rerio
ENSRNOG00000004247	Nhp2	89	93.519	ENSDNOG00000017150	NHP2	67	93.519	Dasypus_novemcinctus
ENSRNOG00000004247	Nhp2	89	94.444	ENSDORG00000003312	Nhp2	71	94.444	Dipodomys_ordii
ENSRNOG00000004247	Nhp2	88	47.664	FBgn0029148	NHP2	67	47.664	Drosophila_melanogaster
ENSRNOG00000004247	Nhp2	89	92.593	ENSETEG00000006774	NHP2	70	92.593	Echinops_telfairi
ENSRNOG00000004247	Nhp2	89	91.667	ENSEASG00005012569	NHP2	71	91.667	Equus_asinus_asinus
ENSRNOG00000004247	Nhp2	89	89.815	ENSECAG00000022963	NHP2	61	89.815	Equus_caballus
ENSRNOG00000004247	Nhp2	83	80.000	ENSELUG00000021981	nhp2	85	80.000	Esox_lucius
ENSRNOG00000004247	Nhp2	89	92.593	ENSFCAG00000015541	NHP2	71	92.593	Felis_catus
ENSRNOG00000004247	Nhp2	89	80.556	ENSFALG00000008774	NHP2	68	80.556	Ficedula_albicollis
ENSRNOG00000004247	Nhp2	89	88.889	ENSFDAG00000008131	NHP2	71	88.889	Fukomys_damarensis
ENSRNOG00000004247	Nhp2	89	77.778	ENSFHEG00000000431	nhp2	69	77.778	Fundulus_heteroclitus
ENSRNOG00000004247	Nhp2	89	79.630	ENSGMOG00000000278	nhp2	72	79.630	Gadus_morhua
ENSRNOG00000004247	Nhp2	81	81.633	ENSGALG00000033666	NHP2	58	81.633	Gallus_gallus
ENSRNOG00000004247	Nhp2	89	77.778	ENSGAFG00000009838	nhp2	69	77.778	Gambusia_affinis
ENSRNOG00000004247	Nhp2	89	76.852	ENSGACG00000020889	nhp2	71	76.852	Gasterosteus_aculeatus
ENSRNOG00000004247	Nhp2	61	80.000	ENSGAGG00000006901	NHP2	60	80.000	Gopherus_agassizii
ENSRNOG00000004247	Nhp2	89	82.407	ENSGGOG00000040409	-	73	82.407	Gorilla_gorilla
ENSRNOG00000004247	Nhp2	89	82.407	ENSGGOG00000027198	-	73	82.407	Gorilla_gorilla
ENSRNOG00000004247	Nhp2	79	77.895	ENSHBUG00000010207	nhp2	70	76.852	Haplochromis_burtoni
ENSRNOG00000004247	Nhp2	96	87.931	ENSHGLG00000013630	NHP2	76	87.931	Heterocephalus_glaber_female
ENSRNOG00000004247	Nhp2	100	70.629	ENSHGLG00000014450	-	100	70.629	Heterocephalus_glaber_female
ENSRNOG00000004247	Nhp2	100	70.629	ENSHGLG00100003440	-	100	70.629	Heterocephalus_glaber_male
ENSRNOG00000004247	Nhp2	96	87.931	ENSHGLG00100007298	NHP2	76	87.931	Heterocephalus_glaber_male
ENSRNOG00000004247	Nhp2	100	70.629	ENSHGLG00100005282	-	100	70.629	Heterocephalus_glaber_male
ENSRNOG00000004247	Nhp2	89	77.778	ENSHCOG00000019552	nhp2	68	77.778	Hippocampus_comes
ENSRNOG00000004247	Nhp2	89	83.333	ENSIPUG00000024197	NHP2	72	83.333	Ictalurus_punctatus
ENSRNOG00000004247	Nhp2	89	94.444	ENSSTOG00000003235	NHP2	71	94.444	Ictidomys_tridecemlineatus
ENSRNOG00000004247	Nhp2	89	94.444	ENSJJAG00000016469	Nhp2	71	94.444	Jaculus_jaculus
ENSRNOG00000004247	Nhp2	79	76.842	ENSLBEG00000002128	nhp2	70	75.926	Labrus_bergylta
ENSRNOG00000004247	Nhp2	89	83.333	ENSLACG00000017167	NHP2	70	83.333	Latimeria_chalumnae
ENSRNOG00000004247	Nhp2	89	81.481	ENSLOCG00000009630	nhp2	72	81.481	Lepisosteus_oculatus
ENSRNOG00000004247	Nhp2	89	92.593	ENSLAFG00000012828	NHP2	71	92.593	Loxodonta_africana
ENSRNOG00000004247	Nhp2	89	93.519	ENSMFAG00000032376	NHP2	71	93.519	Macaca_fascicularis
ENSRNOG00000004247	Nhp2	89	68.519	ENSMMUG00000046673	-	70	68.519	Macaca_mulatta
ENSRNOG00000004247	Nhp2	89	93.519	ENSMNEG00000038787	NHP2	71	93.519	Macaca_nemestrina
ENSRNOG00000004247	Nhp2	89	93.519	ENSMLEG00000028639	NHP2	71	93.519	Mandrillus_leucophaeus
ENSRNOG00000004247	Nhp2	79	80.000	ENSMAMG00000022425	nhp2	70	78.704	Mastacembelus_armatus
ENSRNOG00000004247	Nhp2	79	77.895	ENSMZEG00005027834	nhp2	70	76.852	Maylandia_zebra
ENSRNOG00000004247	Nhp2	83	80.000	ENSMGAG00000003917	NHP2	100	80.000	Meleagris_gallopavo
ENSRNOG00000004247	Nhp2	89	92.593	ENSMICG00000005379	NHP2	71	92.593	Microcebus_murinus
ENSRNOG00000004247	Nhp2	100	76.471	ENSMOCG00000022171	Nhp2	100	76.471	Microtus_ochrogaster
ENSRNOG00000004247	Nhp2	79	76.842	ENSMMOG00000016811	nhp2	70	75.926	Mola_mola
ENSRNOG00000004247	Nhp2	89	85.185	ENSMODG00000004231	NHP2	70	85.185	Monodelphis_domestica
ENSRNOG00000004247	Nhp2	89	76.852	ENSMALG00000009613	nhp2	70	76.852	Monopterus_albus
ENSRNOG00000004247	Nhp2	100	75.817	MGP_CAROLIEiJ_G0016312	Nhp2	100	75.817	Mus_caroli
ENSRNOG00000004247	Nhp2	100	75.163	ENSMUSG00000001056	Nhp2	100	75.163	Mus_musculus
ENSRNOG00000004247	Nhp2	100	75.817	MGP_PahariEiJ_G0017447	Nhp2	100	75.817	Mus_pahari
ENSRNOG00000004247	Nhp2	100	75.163	MGP_SPRETEiJ_G0017156	Nhp2	100	75.163	Mus_spretus
ENSRNOG00000004247	Nhp2	89	92.593	ENSMPUG00000000747	NHP2	70	92.593	Mustela_putorius_furo
ENSRNOG00000004247	Nhp2	89	90.741	ENSMLUG00000003377	NHP2	71	90.741	Myotis_lucifugus
ENSRNOG00000004247	Nhp2	89	94.444	ENSNGAG00000021818	Nhp2	71	94.444	Nannospalax_galili
ENSRNOG00000004247	Nhp2	79	81.053	ENSNBRG00000018016	nhp2	70	79.630	Neolamprologus_brichardi
ENSRNOG00000004247	Nhp2	89	79.825	ENSNLEG00000015765	NHP2	75	79.825	Nomascus_leucogenys
ENSRNOG00000004247	Nhp2	89	85.185	ENSMEUG00000003839	NHP2	70	85.185	Notamacropus_eugenii
ENSRNOG00000004247	Nhp2	89	68.519	ENSOPRG00000007907	NHP2	70	68.519	Ochotona_princeps
ENSRNOG00000004247	Nhp2	89	92.593	ENSODEG00000006948	NHP2	71	92.593	Octodon_degus
ENSRNOG00000004247	Nhp2	79	82.105	ENSONIG00000017865	nhp2	70	80.556	Oreochromis_niloticus
ENSRNOG00000004247	Nhp2	62	85.333	ENSOANG00000001204	-	100	85.333	Ornithorhynchus_anatinus
ENSRNOG00000004247	Nhp2	88	94.393	ENSOCUG00000016057	-	70	94.393	Oryctolagus_cuniculus
ENSRNOG00000004247	Nhp2	88	94.393	ENSOCUG00000016091	-	70	94.393	Oryctolagus_cuniculus
ENSRNOG00000004247	Nhp2	89	79.630	ENSORLG00000029195	nhp2	72	79.630	Oryzias_latipes
ENSRNOG00000004247	Nhp2	89	79.630	ENSORLG00020003277	nhp2	72	79.630	Oryzias_latipes_hni
ENSRNOG00000004247	Nhp2	89	79.630	ENSORLG00015007851	nhp2	72	79.630	Oryzias_latipes_hsok
ENSRNOG00000004247	Nhp2	89	78.704	ENSOMEG00000017381	nhp2	64	78.704	Oryzias_melastigma
ENSRNOG00000004247	Nhp2	89	90.909	ENSOGAG00000016108	NHP2	71	90.909	Otolemur_garnettii
ENSRNOG00000004247	Nhp2	100	70.213	ENSOARG00000006274	NHP2	100	70.213	Ovis_aries
ENSRNOG00000004247	Nhp2	89	93.519	ENSPPAG00000028668	NHP2	71	93.519	Pan_paniscus
ENSRNOG00000004247	Nhp2	89	80.556	ENSPPAG00000038834	-	73	80.556	Pan_paniscus
ENSRNOG00000004247	Nhp2	89	92.593	ENSPPRG00000022505	NHP2	71	92.593	Panthera_pardus
ENSRNOG00000004247	Nhp2	78	92.553	ENSPTIG00000021731	NHP2	81	93.137	Panthera_tigris_altaica
ENSRNOG00000004247	Nhp2	89	93.519	ENSPTRG00000048185	NHP2	71	93.519	Pan_troglodytes
ENSRNOG00000004247	Nhp2	89	80.556	ENSPTRG00000049011	-	74	80.556	Pan_troglodytes
ENSRNOG00000004247	Nhp2	89	80.556	ENSPTRG00000050430	-	74	80.556	Pan_troglodytes
ENSRNOG00000004247	Nhp2	89	93.519	ENSPANG00000019121	NHP2	71	93.519	Papio_anubis
ENSRNOG00000004247	Nhp2	96	79.310	ENSPKIG00000006410	nhp2	77	79.310	Paramormyrops_kingsleyae
ENSRNOG00000004247	Nhp2	86	76.923	ENSPMGG00000002916	nhp2	66	76.852	Periophthalmus_magnuspinnatus
ENSRNOG00000004247	Nhp2	100	75.163	ENSPEMG00000023567	Nhp2	100	75.163	Peromyscus_maniculatus_bairdii
ENSRNOG00000004247	Nhp2	89	72.222	ENSPMAG00000009888	nhp2	70	72.222	Petromyzon_marinus
ENSRNOG00000004247	Nhp2	100	81.818	ENSPCIG00000019848	-	100	81.818	Phascolarctos_cinereus
ENSRNOG00000004247	Nhp2	89	85.185	ENSPCIG00000002727	-	70	85.185	Phascolarctos_cinereus
ENSRNOG00000004247	Nhp2	89	75.000	ENSPFOG00000002315	nhp2	69	75.000	Poecilia_formosa
ENSRNOG00000004247	Nhp2	89	74.074	ENSPLAG00000019287	nhp2	69	74.074	Poecilia_latipinna
ENSRNOG00000004247	Nhp2	89	75.000	ENSPMEG00000024346	nhp2	69	75.000	Poecilia_mexicana
ENSRNOG00000004247	Nhp2	89	72.222	ENSPREG00000005005	nhp2	92	72.222	Poecilia_reticulata
ENSRNOG00000004247	Nhp2	89	92.593	ENSPPYG00000016105	NHP2	71	92.593	Pongo_abelii
ENSRNOG00000004247	Nhp2	89	92.593	ENSPCOG00000020708	NHP2	71	92.593	Propithecus_coquereli
ENSRNOG00000004247	Nhp2	89	90.741	ENSPVAG00000001647	NHP2	71	90.741	Pteropus_vampyrus
ENSRNOG00000004247	Nhp2	79	77.895	ENSPNYG00000022418	nhp2	70	76.852	Pundamilia_nyererei
ENSRNOG00000004247	Nhp2	89	77.778	ENSPNAG00000013779	nhp2	72	77.778	Pygocentrus_nattereri
ENSRNOG00000004247	Nhp2	89	93.519	ENSRBIG00000018610	NHP2	71	93.519	Rhinopithecus_bieti
ENSRNOG00000004247	Nhp2	89	78.704	ENSRROG00000044295	-	73	78.704	Rhinopithecus_roxellana
ENSRNOG00000004247	Nhp2	89	93.519	ENSRROG00000043373	NHP2	71	93.519	Rhinopithecus_roxellana
ENSRNOG00000004247	Nhp2	86	47.826	YDL208W	-	74	47.826	Saccharomyces_cerevisiae
ENSRNOG00000004247	Nhp2	89	92.593	ENSSBOG00000027889	NHP2	71	92.593	Saimiri_boliviensis_boliviensis
ENSRNOG00000004247	Nhp2	89	84.259	ENSSHAG00000015581	NHP2	70	84.259	Sarcophilus_harrisii
ENSRNOG00000004247	Nhp2	89	79.630	ENSSFOG00015017061	nhp2	72	79.630	Scleropages_formosus
ENSRNOG00000004247	Nhp2	89	76.852	ENSSMAG00000011251	nhp2	72	76.852	Scophthalmus_maximus
ENSRNOG00000004247	Nhp2	89	78.704	ENSSDUG00000023355	nhp2	71	78.704	Seriola_dumerili
ENSRNOG00000004247	Nhp2	89	83.333	ENSSPUG00000005173	NHP2	71	83.333	Sphenodon_punctatus
ENSRNOG00000004247	Nhp2	89	74.074	ENSSPAG00000011696	nhp2	71	74.074	Stegastes_partitus
ENSRNOG00000004247	Nhp2	89	91.667	ENSSSCG00000039635	-	61	91.667	Sus_scrofa
ENSRNOG00000004247	Nhp2	100	70.423	ENSSSCG00000009710	-	100	70.423	Sus_scrofa
ENSRNOG00000004247	Nhp2	61	71.622	ENSTGUG00000000368	NHP2	62	71.622	Taeniopygia_guttata
ENSRNOG00000004247	Nhp2	86	79.808	ENSTRUG00000008183	nhp2	68	79.630	Takifugu_rubripes
ENSRNOG00000004247	Nhp2	85	71.296	ENSTNIG00000004219	nhp2	68	71.429	Tetraodon_nigroviridis
ENSRNOG00000004247	Nhp2	89	92.593	ENSUAMG00000025154	NHP2	71	92.593	Ursus_americanus
ENSRNOG00000004247	Nhp2	89	92.593	ENSUMAG00000023916	NHP2	70	92.593	Ursus_maritimus
ENSRNOG00000004247	Nhp2	55	89.394	ENSVPAG00000010059	NHP2	59	89.394	Vicugna_pacos
ENSRNOG00000004247	Nhp2	83	93.000	ENSVVUG00000001030	NHP2	56	93.000	Vulpes_vulpes
ENSRNOG00000004247	Nhp2	88	81.308	ENSXETG00000006731	nhp2	72	81.308	Xenopus_tropicalis
ENSRNOG00000004247	Nhp2	89	77.778	ENSXMAG00000007031	nhp2	69	77.778	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000454	snoRNA guided rRNA pseudouridine synthesis	12446766.	IDA	Process
GO:0000469	cleavage involved in rRNA processing	21873635.	IBA	Process
GO:0000470	maturation of LSU-rRNA	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0003730	mRNA 3'-UTR binding	15044956.	IDA	Function
GO:0005697	telomerase holoenzyme complex	-	ISO	Component
GO:0007004	telomere maintenance via telomerase	-	ISO	Process
GO:0031118	rRNA pseudouridine synthesis	21873635.	IBA	Process
GO:0031120	snRNA pseudouridine synthesis	21873635.	IBA	Process
GO:0031429	box H/ACA snoRNP complex	21873635.	IBA	Component
GO:0031429	box H/ACA snoRNP complex	12446766.	IDA	Component
GO:0031429	box H/ACA snoRNP complex	-	ISO	Component
GO:0034511	U3 snoRNA binding	15044956.	IDA	Function
GO:0034513	box H/ACA snoRNA binding	21873635.	IBA	Function
GO:0034513	box H/ACA snoRNA binding	-	ISO	Function
GO:0070034	telomerase RNA binding	-	ISO	Function
GO:0090661	box H/ACA telomerase RNP complex	-	ISO	Component