EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004301 (Gene tree)
Gene ID: 362902
Gene Symbol: Dcaf13
Alias: Gm83|LOC362902|Wdsof1
Full Name: DDB1 and CUL4 associated factor 13
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 34983 bases
Position: chr7:78005232-78040214
Accession: 1308458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000005803	Sof1	PF04158.14	6.9e-35	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000005803	-	1497	XM_006241605	ENSRNOP00000005803	445 (aa)	XP_006241667	F1M7P1

Gene Model

Click here to download ENSRNOG00000004301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004301's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004301	Dcaf13	98	92.644	ENSG00000164934	DCAF13	100	92.647	Homo_sapiens
ENSRNOG00000004301	Dcaf13	100	78.202	ENSAPOG00000000524	dcaf13	100	78.202	Acanthochromis_polyacanthus
ENSRNOG00000004301	Dcaf13	100	92.135	ENSAMEG00000001595	DCAF13	99	92.135	Ailuropoda_melanoleuca
ENSRNOG00000004301	Dcaf13	100	78.202	ENSACIG00000003110	dcaf13	99	78.202	Amphilophus_citrinellus
ENSRNOG00000004301	Dcaf13	100	78.427	ENSAOCG00000011982	dcaf13	100	78.427	Amphiprion_ocellaris
ENSRNOG00000004301	Dcaf13	95	73.302	ENSAPEG00000021156	dcaf13	95	73.302	Amphiprion_percula
ENSRNOG00000004301	Dcaf13	100	79.326	ENSATEG00000024751	dcaf13	100	79.326	Anabas_testudineus
ENSRNOG00000004301	Dcaf13	100	83.632	ENSAPLG00000002811	DCAF13	100	83.632	Anas_platyrhynchos
ENSRNOG00000004301	Dcaf13	100	84.719	ENSACAG00000009465	DCAF13	100	84.719	Anolis_carolinensis
ENSRNOG00000004301	Dcaf13	100	93.483	ENSANAG00000020798	DCAF13	100	93.483	Aotus_nancymaae
ENSRNOG00000004301	Dcaf13	100	73.933	ENSANAG00000023472	-	100	73.933	Aotus_nancymaae
ENSRNOG00000004301	Dcaf13	100	78.202	ENSACLG00000025212	dcaf13	90	78.202	Astatotilapia_calliptera
ENSRNOG00000004301	Dcaf13	100	76.180	ENSAMXG00000037008	dcaf13	100	76.180	Astyanax_mexicanus
ENSRNOG00000004301	Dcaf13	98	93.333	ENSBTAG00000021449	DCAF13	100	93.258	Bos_taurus
ENSRNOG00000004301	Dcaf13	95	49.764	WBGene00022742	ZK430.7	95	49.764	Caenorhabditis_elegans
ENSRNOG00000004301	Dcaf13	98	93.793	ENSCJAG00000016181	DCAF13	100	93.708	Callithrix_jacchus
ENSRNOG00000004301	Dcaf13	100	93.933	ENSCAFG00000000663	DCAF13	100	93.933	Canis_familiaris
ENSRNOG00000004301	Dcaf13	100	93.933	ENSCAFG00020003044	DCAF13	100	93.933	Canis_lupus_dingo
ENSRNOG00000004301	Dcaf13	100	92.360	ENSCHIG00000020556	DCAF13	100	92.360	Capra_hircus
ENSRNOG00000004301	Dcaf13	100	91.685	ENSTSYG00000003307	DCAF13	100	91.685	Carlito_syrichta
ENSRNOG00000004301	Dcaf13	96	82.201	ENSCAPG00000007305	DCAF13	100	81.235	Cavia_aperea
ENSRNOG00000004301	Dcaf13	100	92.809	ENSCPOG00000012291	DCAF13	100	92.809	Cavia_porcellus
ENSRNOG00000004301	Dcaf13	100	92.360	ENSCCAG00000033103	DCAF13	76	92.360	Cebus_capucinus
ENSRNOG00000004301	Dcaf13	100	93.034	ENSCATG00000032160	DCAF13	85	93.034	Cercocebus_atys
ENSRNOG00000004301	Dcaf13	100	64.719	ENSCATG00000037371	-	96	64.719	Cercocebus_atys
ENSRNOG00000004301	Dcaf13	100	93.708	ENSCLAG00000006565	DCAF13	100	93.708	Chinchilla_lanigera
ENSRNOG00000004301	Dcaf13	100	93.034	ENSCSAG00000011887	DCAF13	100	93.034	Chlorocebus_sabaeus
ENSRNOG00000004301	Dcaf13	72	79.937	ENSCHOG00000003007	-	74	79.937	Choloepus_hoffmanni
ENSRNOG00000004301	Dcaf13	100	86.966	ENSCPBG00000026050	DCAF13	100	86.966	Chrysemys_picta_bellii
ENSRNOG00000004301	Dcaf13	99	64.253	ENSCING00000005282	-	99	64.253	Ciona_intestinalis
ENSRNOG00000004301	Dcaf13	99	63.348	ENSCSAVG00000006538	-	99	63.348	Ciona_savignyi
ENSRNOG00000004301	Dcaf13	100	64.494	ENSCANG00000038828	-	96	64.494	Colobus_angolensis_palliatus
ENSRNOG00000004301	Dcaf13	100	84.270	ENSCANG00000043032	DCAF13	76	84.270	Colobus_angolensis_palliatus
ENSRNOG00000004301	Dcaf13	100	96.404	ENSCGRG00001023256	Dcaf13	100	96.404	Cricetulus_griseus_chok1gshd
ENSRNOG00000004301	Dcaf13	96	95.775	ENSCGRG00000004862	Dcaf13	92	95.775	Cricetulus_griseus_crigri
ENSRNOG00000004301	Dcaf13	100	78.876	ENSCSEG00000013595	dcaf13	100	78.876	Cynoglossus_semilaevis
ENSRNOG00000004301	Dcaf13	100	67.416	ENSCVAG00000010337	dcaf13	100	67.416	Cyprinodon_variegatus
ENSRNOG00000004301	Dcaf13	100	74.607	ENSDARG00000002267	dcaf13	100	74.607	Danio_rerio
ENSRNOG00000004301	Dcaf13	81	90.582	ENSDNOG00000044885	DCAF13	95	90.582	Dasypus_novemcinctus
ENSRNOG00000004301	Dcaf13	100	89.062	ENSDORG00000011873	Dcaf13	100	89.062	Dipodomys_ordii
ENSRNOG00000004301	Dcaf13	99	59.502	FBgn0036500	CG7275	99	59.502	Drosophila_melanogaster
ENSRNOG00000004301	Dcaf13	100	86.577	ENSETEG00000004777	DCAF13	77	86.577	Echinops_telfairi
ENSRNOG00000004301	Dcaf13	99	61.765	ENSEBUG00000008116	dcaf13	99	61.765	Eptatretus_burgeri
ENSRNOG00000004301	Dcaf13	100	93.034	ENSEASG00005001266	DCAF13	100	93.034	Equus_asinus_asinus
ENSRNOG00000004301	Dcaf13	100	93.034	ENSECAG00000009654	DCAF13	100	93.034	Equus_caballus
ENSRNOG00000004301	Dcaf13	100	80.313	ENSEEUG00000003286	DCAF13	77	80.313	Erinaceus_europaeus
ENSRNOG00000004301	Dcaf13	100	69.888	ENSELUG00000006191	dcaf13	99	76.847	Esox_lucius
ENSRNOG00000004301	Dcaf13	100	94.157	ENSFCAG00000027256	DCAF13	100	94.157	Felis_catus
ENSRNOG00000004301	Dcaf13	100	87.191	ENSFALG00000005982	DCAF13	100	87.191	Ficedula_albicollis
ENSRNOG00000004301	Dcaf13	100	93.258	ENSFDAG00000014869	DCAF13	100	93.258	Fukomys_damarensis
ENSRNOG00000004301	Dcaf13	99	77.928	ENSFHEG00000009965	dcaf13	99	77.928	Fundulus_heteroclitus
ENSRNOG00000004301	Dcaf13	100	76.180	ENSGMOG00000005753	dcaf13	100	76.180	Gadus_morhua
ENSRNOG00000004301	Dcaf13	100	87.416	ENSGALG00000034618	DCAF13	79	87.416	Gallus_gallus
ENSRNOG00000004301	Dcaf13	94	79.137	ENSGAFG00000000368	dcaf13	88	79.137	Gambusia_affinis
ENSRNOG00000004301	Dcaf13	100	77.528	ENSGACG00000004840	dcaf13	100	77.528	Gasterosteus_aculeatus
ENSRNOG00000004301	Dcaf13	100	85.843	ENSGAGG00000025283	DCAF13	100	85.843	Gopherus_agassizii
ENSRNOG00000004301	Dcaf13	93	92.718	ENSGGOG00000015124	DCAF13	79	92.654	Gorilla_gorilla
ENSRNOG00000004301	Dcaf13	100	78.202	ENSHBUG00000015794	dcaf13	90	78.202	Haplochromis_burtoni
ENSRNOG00000004301	Dcaf13	100	93.483	ENSHGLG00000008862	DCAF13	100	93.483	Heterocephalus_glaber_female
ENSRNOG00000004301	Dcaf13	100	93.258	ENSHGLG00100017157	DCAF13	100	93.258	Heterocephalus_glaber_male
ENSRNOG00000004301	Dcaf13	100	76.404	ENSHCOG00000014302	dcaf13	100	76.404	Hippocampus_comes
ENSRNOG00000004301	Dcaf13	100	76.629	ENSIPUG00000022430	dcaf13	100	76.629	Ictalurus_punctatus
ENSRNOG00000004301	Dcaf13	98	94.943	ENSSTOG00000008009	DCAF13	100	94.831	Ictidomys_tridecemlineatus
ENSRNOG00000004301	Dcaf13	81	95.278	ENSJJAG00000000742	-	94	95.278	Jaculus_jaculus
ENSRNOG00000004301	Dcaf13	100	84.944	ENSJJAG00000001990	-	100	84.944	Jaculus_jaculus
ENSRNOG00000004301	Dcaf13	100	79.775	ENSKMAG00000002350	dcaf13	100	79.775	Kryptolebias_marmoratus
ENSRNOG00000004301	Dcaf13	100	78.876	ENSLBEG00000002441	dcaf13	100	78.876	Labrus_bergylta
ENSRNOG00000004301	Dcaf13	100	84.045	ENSLACG00000013358	DCAF13	100	84.045	Latimeria_chalumnae
ENSRNOG00000004301	Dcaf13	100	81.124	ENSLOCG00000009498	dcaf13	100	81.124	Lepisosteus_oculatus
ENSRNOG00000004301	Dcaf13	100	93.483	ENSLAFG00000009807	DCAF13	100	93.483	Loxodonta_africana
ENSRNOG00000004301	Dcaf13	100	89.663	ENSMFAG00000043378	-	100	89.663	Macaca_fascicularis
ENSRNOG00000004301	Dcaf13	100	92.809	ENSMFAG00000008982	-	77	92.809	Macaca_fascicularis
ENSRNOG00000004301	Dcaf13	100	92.584	ENSMMUG00000019594	-	100	92.584	Macaca_mulatta
ENSRNOG00000004301	Dcaf13	80	91.597	ENSMMUG00000019405	-	70	91.597	Macaca_mulatta
ENSRNOG00000004301	Dcaf13	100	81.798	ENSMNEG00000033963	-	75	81.798	Macaca_nemestrina
ENSRNOG00000004301	Dcaf13	100	89.663	ENSMNEG00000035898	-	100	89.663	Macaca_nemestrina
ENSRNOG00000004301	Dcaf13	100	64.719	ENSMNEG00000030562	-	96	64.719	Macaca_nemestrina
ENSRNOG00000004301	Dcaf13	100	67.416	ENSMLEG00000039177	-	100	67.416	Mandrillus_leucophaeus
ENSRNOG00000004301	Dcaf13	100	93.034	ENSMLEG00000041996	DCAF13	100	93.034	Mandrillus_leucophaeus
ENSRNOG00000004301	Dcaf13	100	78.202	ENSMAMG00000003196	dcaf13	100	78.202	Mastacembelus_armatus
ENSRNOG00000004301	Dcaf13	100	78.202	ENSMZEG00005012249	dcaf13	90	78.202	Maylandia_zebra
ENSRNOG00000004301	Dcaf13	95	87.441	ENSMGAG00000012340	DCAF13	99	87.441	Meleagris_gallopavo
ENSRNOG00000004301	Dcaf13	100	84.719	ENSMAUG00000017580	Dcaf13	100	84.719	Mesocricetus_auratus
ENSRNOG00000004301	Dcaf13	98	93.103	ENSMICG00000006907	DCAF13	100	93.034	Microcebus_murinus
ENSRNOG00000004301	Dcaf13	100	95.056	ENSMOCG00000011609	Dcaf13	100	95.056	Microtus_ochrogaster
ENSRNOG00000004301	Dcaf13	100	78.652	ENSMMOG00000017905	dcaf13	100	78.652	Mola_mola
ENSRNOG00000004301	Dcaf13	100	86.517	ENSMODG00000005549	DCAF13	100	86.517	Monodelphis_domestica
ENSRNOG00000004301	Dcaf13	100	77.753	ENSMALG00000007415	dcaf13	100	77.753	Monopterus_albus
ENSRNOG00000004301	Dcaf13	100	96.629	MGP_CAROLIEiJ_G0019757	Dcaf13	100	96.629	Mus_caroli
ENSRNOG00000004301	Dcaf13	100	97.079	ENSMUSG00000022300	Dcaf13	100	97.079	Mus_musculus
ENSRNOG00000004301	Dcaf13	100	97.079	MGP_PahariEiJ_G0019766	Dcaf13	100	97.079	Mus_pahari
ENSRNOG00000004301	Dcaf13	100	97.303	MGP_SPRETEiJ_G0020654	Dcaf13	100	97.303	Mus_spretus
ENSRNOG00000004301	Dcaf13	91	83.663	ENSMPUG00000004976	-	98	83.663	Mustela_putorius_furo
ENSRNOG00000004301	Dcaf13	98	94.023	ENSMLUG00000007375	DCAF13	100	93.933	Myotis_lucifugus
ENSRNOG00000004301	Dcaf13	100	95.955	ENSNGAG00000021670	Dcaf13	100	95.955	Nannospalax_galili
ENSRNOG00000004301	Dcaf13	100	78.427	ENSNBRG00000007078	dcaf13	100	78.427	Neolamprologus_brichardi
ENSRNOG00000004301	Dcaf13	98	93.103	ENSNLEG00000003791	DCAF13	75	93.034	Nomascus_leucogenys
ENSRNOG00000004301	Dcaf13	100	67.640	ENSNLEG00000032043	-	100	67.640	Nomascus_leucogenys
ENSRNOG00000004301	Dcaf13	76	89.524	ENSMEUG00000014697	-	80	89.524	Notamacropus_eugenii
ENSRNOG00000004301	Dcaf13	100	93.258	ENSODEG00000000870	DCAF13	100	93.258	Octodon_degus
ENSRNOG00000004301	Dcaf13	100	77.978	ENSONIG00000000142	dcaf13	100	77.978	Oreochromis_niloticus
ENSRNOG00000004301	Dcaf13	100	93.483	ENSOCUG00000009197	DCAF13	100	93.483	Oryctolagus_cuniculus
ENSRNOG00000004301	Dcaf13	100	79.775	ENSORLG00000002363	dcaf13	100	79.775	Oryzias_latipes
ENSRNOG00000004301	Dcaf13	100	79.775	ENSORLG00020001143	dcaf13	100	79.775	Oryzias_latipes_hni
ENSRNOG00000004301	Dcaf13	100	79.326	ENSORLG00015015911	dcaf13	100	79.326	Oryzias_latipes_hsok
ENSRNOG00000004301	Dcaf13	100	80.225	ENSOMEG00000006040	dcaf13	100	80.225	Oryzias_melastigma
ENSRNOG00000004301	Dcaf13	98	92.874	ENSOGAG00000002277	DCAF13	100	92.809	Otolemur_garnettii
ENSRNOG00000004301	Dcaf13	100	92.135	ENSOARG00000016227	DCAF13	100	92.135	Ovis_aries
ENSRNOG00000004301	Dcaf13	98	93.103	ENSPPAG00000029408	DCAF13	75	93.034	Pan_paniscus
ENSRNOG00000004301	Dcaf13	100	93.708	ENSPPRG00000005766	DCAF13	100	93.708	Panthera_pardus
ENSRNOG00000004301	Dcaf13	100	94.157	ENSPTIG00000016790	DCAF13	100	94.157	Panthera_tigris_altaica
ENSRNOG00000004301	Dcaf13	98	92.874	ENSPTRG00000020493	DCAF13	75	92.809	Pan_troglodytes
ENSRNOG00000004301	Dcaf13	100	90.112	ENSPANG00000026479	-	100	90.112	Papio_anubis
ENSRNOG00000004301	Dcaf13	100	93.034	ENSPANG00000010643	-	77	93.034	Papio_anubis
ENSRNOG00000004301	Dcaf13	100	75.955	ENSPKIG00000017471	dcaf13	100	75.955	Paramormyrops_kingsleyae
ENSRNOG00000004301	Dcaf13	100	83.596	ENSPSIG00000016768	DCAF13	100	83.596	Pelodiscus_sinensis
ENSRNOG00000004301	Dcaf13	100	75.281	ENSPMGG00000022144	dcaf13	100	75.281	Periophthalmus_magnuspinnatus
ENSRNOG00000004301	Dcaf13	100	96.404	ENSPEMG00000011958	Dcaf13	100	96.404	Peromyscus_maniculatus_bairdii
ENSRNOG00000004301	Dcaf13	100	87.640	ENSPCIG00000026186	DCAF13	100	87.640	Phascolarctos_cinereus
ENSRNOG00000004301	Dcaf13	100	78.652	ENSPFOG00000019444	dcaf13	100	78.652	Poecilia_formosa
ENSRNOG00000004301	Dcaf13	100	78.652	ENSPLAG00000015924	dcaf13	100	78.652	Poecilia_latipinna
ENSRNOG00000004301	Dcaf13	100	78.652	ENSPMEG00000004022	dcaf13	100	78.652	Poecilia_mexicana
ENSRNOG00000004301	Dcaf13	100	78.652	ENSPREG00000016063	dcaf13	100	78.652	Poecilia_reticulata
ENSRNOG00000004301	Dcaf13	98	93.563	ENSPPYG00000018809	-	100	93.483	Pongo_abelii
ENSRNOG00000004301	Dcaf13	98	87.586	ENSPCAG00000007620	DCAF13	75	87.640	Procavia_capensis
ENSRNOG00000004301	Dcaf13	97	88.399	ENSPCOG00000028064	-	100	88.435	Propithecus_coquereli
ENSRNOG00000004301	Dcaf13	100	93.933	ENSPVAG00000017178	DCAF13	76	93.933	Pteropus_vampyrus
ENSRNOG00000004301	Dcaf13	100	78.427	ENSPNYG00000003861	dcaf13	100	78.427	Pundamilia_nyererei
ENSRNOG00000004301	Dcaf13	100	76.180	ENSPNAG00000010091	dcaf13	100	76.180	Pygocentrus_nattereri
ENSRNOG00000004301	Dcaf13	100	92.809	ENSRBIG00000032300	DCAF13	85	92.809	Rhinopithecus_bieti
ENSRNOG00000004301	Dcaf13	99	65.991	ENSRROG00000032221	-	100	65.991	Rhinopithecus_roxellana
ENSRNOG00000004301	Dcaf13	100	92.584	ENSRROG00000040442	DCAF13	100	92.584	Rhinopithecus_roxellana
ENSRNOG00000004301	Dcaf13	99	45.824	YLL011W	-	95	45.824	Saccharomyces_cerevisiae
ENSRNOG00000004301	Dcaf13	100	93.034	ENSSBOG00000025597	DCAF13	100	93.034	Saimiri_boliviensis_boliviensis
ENSRNOG00000004301	Dcaf13	100	87.416	ENSSHAG00000006588	DCAF13	100	87.416	Sarcophilus_harrisii
ENSRNOG00000004301	Dcaf13	99	77.477	ENSSFOG00015006138	dcaf13	99	77.477	Scleropages_formosus
ENSRNOG00000004301	Dcaf13	100	78.427	ENSSMAG00000009568	dcaf13	100	78.427	Scophthalmus_maximus
ENSRNOG00000004301	Dcaf13	100	77.978	ENSSLDG00000010517	dcaf13	100	77.978	Seriola_lalandi_dorsalis
ENSRNOG00000004301	Dcaf13	100	84.719	ENSSPUG00000009148	DCAF13	100	84.719	Sphenodon_punctatus
ENSRNOG00000004301	Dcaf13	100	78.427	ENSSPAG00000019890	dcaf13	100	78.427	Stegastes_partitus
ENSRNOG00000004301	Dcaf13	100	90.787	ENSSSCG00000006048	DCAF13	100	90.787	Sus_scrofa
ENSRNOG00000004301	Dcaf13	95	87.915	ENSTGUG00000012152	DCAF13	100	87.915	Taeniopygia_guttata
ENSRNOG00000004301	Dcaf13	100	78.427	ENSTRUG00000007438	dcaf13	100	78.427	Takifugu_rubripes
ENSRNOG00000004301	Dcaf13	94	77.938	ENSTNIG00000008215	dcaf13	84	77.938	Tetraodon_nigroviridis
ENSRNOG00000004301	Dcaf13	51	92.478	ENSTBEG00000015812	-	50	92.478	Tupaia_belangeri
ENSRNOG00000004301	Dcaf13	98	82.759	ENSTTRG00000014906	DCAF13	75	82.697	Tursiops_truncatus
ENSRNOG00000004301	Dcaf13	100	93.483	ENSUAMG00000017931	DCAF13	100	93.483	Ursus_americanus
ENSRNOG00000004301	Dcaf13	99	86.230	ENSUMAG00000019830	DCAF13	76	86.230	Ursus_maritimus
ENSRNOG00000004301	Dcaf13	100	93.483	ENSVPAG00000006725	DCAF13	76	93.483	Vicugna_pacos
ENSRNOG00000004301	Dcaf13	94	94.964	ENSVVUG00000016884	DCAF13	89	94.964	Vulpes_vulpes
ENSRNOG00000004301	Dcaf13	82	79.945	ENSXETG00000004092	dcaf13	100	79.945	Xenopus_tropicalis
ENSRNOG00000004301	Dcaf13	100	73.708	ENSXCOG00000017005	dcaf13	100	73.708	Xiphophorus_couchianus
ENSRNOG00000004301	Dcaf13	100	79.101	ENSXMAG00000026809	dcaf13	100	79.101	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005813	centrosome	-	IEA	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0030054	cell junction	-	IEA	Component
GO:0030054	cell junction	-	ISO	Component
GO:0030331	estrogen receptor binding	-	ISO	Function
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	21873635.	IBA	Component
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	-	ISO	Component