EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004401 (Gene tree)
Gene ID: 299938
Gene Symbol: Mrpl13
Alias: MGC105961
Full Name: mitochondrial ribosomal protein L13
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 21630 bases
Position: chr7:95288376-95310005
Accession: 1359587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000005815	Ribosomal_L13	PF00572.18	1.9e-45	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000005815	-	839	XM_006241651	ENSRNOP00000005815	178 (aa)	XP_006241713	Q5XFW4

Gene Model

Click here to download ENSRNOG00000004401's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004401	Mrpl13	100	89.326	ENSG00000172172	MRPL13	100	90.476	Homo_sapiens
ENSRNOG00000004401	Mrpl13	100	75.843	ENSAPOG00000004881	mrpl13	99	75.843	Acanthochromis_polyacanthus
ENSRNOG00000004401	Mrpl13	100	91.011	ENSAMEG00000002225	MRPL13	100	91.011	Ailuropoda_melanoleuca
ENSRNOG00000004401	Mrpl13	100	71.910	ENSACIG00000011101	mrpl13	99	71.910	Amphilophus_citrinellus
ENSRNOG00000004401	Mrpl13	100	74.719	ENSAOCG00000001749	mrpl13	99	74.719	Amphiprion_ocellaris
ENSRNOG00000004401	Mrpl13	100	74.719	ENSAPEG00000019583	mrpl13	99	74.719	Amphiprion_percula
ENSRNOG00000004401	Mrpl13	100	73.596	ENSATEG00000023882	mrpl13	99	73.596	Anabas_testudineus
ENSRNOG00000004401	Mrpl13	97	80.814	ENSACAG00000009255	MRPL13	81	80.814	Anolis_carolinensis
ENSRNOG00000004401	Mrpl13	100	91.011	ENSANAG00000033601	MRPL13	100	91.011	Aotus_nancymaae
ENSRNOG00000004401	Mrpl13	100	73.596	ENSACLG00000013200	mrpl13	99	73.596	Astatotilapia_calliptera
ENSRNOG00000004401	Mrpl13	100	78.090	ENSAMXG00000041931	mrpl13	99	78.090	Astyanax_mexicanus
ENSRNOG00000004401	Mrpl13	100	89.326	ENSBTAG00000006767	MRPL13	100	89.326	Bos_taurus
ENSRNOG00000004401	Mrpl13	95	40.828	WBGene00008769	mrpl-13	82	40.828	Caenorhabditis_elegans
ENSRNOG00000004401	Mrpl13	100	90.449	ENSCJAG00000005359	-	100	90.449	Callithrix_jacchus
ENSRNOG00000004401	Mrpl13	100	89.888	ENSCJAG00000023047	-	100	89.888	Callithrix_jacchus
ENSRNOG00000004401	Mrpl13	100	90.449	ENSCAFG00000000940	MRPL13	100	90.449	Canis_familiaris
ENSRNOG00000004401	Mrpl13	97	91.860	ENSCAFG00020005790	MRPL13	100	91.860	Canis_lupus_dingo
ENSRNOG00000004401	Mrpl13	97	90.698	ENSCHIG00000024054	-	100	90.698	Capra_hircus
ENSRNOG00000004401	Mrpl13	100	84.270	ENSCHIG00000013190	-	100	84.270	Capra_hircus
ENSRNOG00000004401	Mrpl13	99	74.432	ENSCHIG00000006914	-	98	74.432	Capra_hircus
ENSRNOG00000004401	Mrpl13	100	74.157	ENSCHIG00000008412	-	85	74.157	Capra_hircus
ENSRNOG00000004401	Mrpl13	86	79.085	ENSTSYG00000011331	MRPL13	88	90.984	Carlito_syrichta
ENSRNOG00000004401	Mrpl13	95	88.757	ENSCAPG00000006896	MRPL13	100	88.757	Cavia_aperea
ENSRNOG00000004401	Mrpl13	100	88.764	ENSCPOG00000005791	MRPL13	100	88.764	Cavia_porcellus
ENSRNOG00000004401	Mrpl13	100	91.011	ENSCCAG00000034544	MRPL13	100	91.011	Cebus_capucinus
ENSRNOG00000004401	Mrpl13	100	90.449	ENSCATG00000044803	MRPL13	100	90.449	Cercocebus_atys
ENSRNOG00000004401	Mrpl13	100	89.326	ENSCLAG00000005646	MRPL13	100	89.326	Chinchilla_lanigera
ENSRNOG00000004401	Mrpl13	100	90.449	ENSCSAG00000010722	MRPL13	100	90.449	Chlorocebus_sabaeus
ENSRNOG00000004401	Mrpl13	100	71.823	ENSCHOG00000006926	MRPL13	100	71.823	Choloepus_hoffmanni
ENSRNOG00000004401	Mrpl13	99	80.791	ENSCPBG00000015289	MRPL13	64	80.791	Chrysemys_picta_bellii
ENSRNOG00000004401	Mrpl13	98	51.685	ENSCING00000005447	-	98	51.685	Ciona_intestinalis
ENSRNOG00000004401	Mrpl13	100	89.888	ENSCANG00000041741	MRPL13	100	89.888	Colobus_angolensis_palliatus
ENSRNOG00000004401	Mrpl13	100	96.629	ENSCGRG00001015700	Mrpl13	100	96.629	Cricetulus_griseus_chok1gshd
ENSRNOG00000004401	Mrpl13	57	97.059	ENSCGRG00000018038	Mrpl13	100	97.059	Cricetulus_griseus_crigri
ENSRNOG00000004401	Mrpl13	99	75.000	ENSCSEG00000005024	mrpl13	98	75.000	Cynoglossus_semilaevis
ENSRNOG00000004401	Mrpl13	100	72.472	ENSCVAG00000019608	mrpl13	99	72.472	Cyprinodon_variegatus
ENSRNOG00000004401	Mrpl13	100	73.034	ENSDARG00000056903	mrpl13	99	73.034	Danio_rerio
ENSRNOG00000004401	Mrpl13	100	88.764	ENSDNOG00000046226	MRPL13	100	88.764	Dasypus_novemcinctus
ENSRNOG00000004401	Mrpl13	100	89.888	ENSDORG00000016654	Mrpl13	100	91.463	Dipodomys_ordii
ENSRNOG00000004401	Mrpl13	98	48.851	FBgn0032720	mRpL13	98	48.851	Drosophila_melanogaster
ENSRNOG00000004401	Mrpl13	100	57.865	ENSETEG00000017682	MRPL13	100	57.865	Echinops_telfairi
ENSRNOG00000004401	Mrpl13	66	73.504	ENSEBUG00000007958	-	85	62.500	Eptatretus_burgeri
ENSRNOG00000004401	Mrpl13	100	92.135	ENSECAG00000021161	MRPL13	100	92.135	Equus_caballus
ENSRNOG00000004401	Mrpl13	100	82.022	ENSEEUG00000006391	MRPL13	100	82.022	Erinaceus_europaeus
ENSRNOG00000004401	Mrpl13	100	75.843	ENSELUG00000023304	mrpl13	99	75.843	Esox_lucius
ENSRNOG00000004401	Mrpl13	100	90.449	ENSFCAG00000001463	MRPL13	100	90.449	Felis_catus
ENSRNOG00000004401	Mrpl13	86	79.739	ENSFALG00000002422	MRPL13	99	79.739	Ficedula_albicollis
ENSRNOG00000004401	Mrpl13	100	87.079	ENSFDAG00000006554	MRPL13	100	87.079	Fukomys_damarensis
ENSRNOG00000004401	Mrpl13	100	73.034	ENSFHEG00000001907	mrpl13	99	73.034	Fundulus_heteroclitus
ENSRNOG00000004401	Mrpl13	78	76.087	ENSGMOG00000004838	mrpl13	100	76.087	Gadus_morhua
ENSRNOG00000004401	Mrpl13	99	79.545	ENSGALG00000041863	MRPL13	98	79.545	Gallus_gallus
ENSRNOG00000004401	Mrpl13	100	73.034	ENSGAFG00000002007	mrpl13	99	73.034	Gambusia_affinis
ENSRNOG00000004401	Mrpl13	81	75.862	ENSGACG00000007061	mrpl13	99	75.862	Gasterosteus_aculeatus
ENSRNOG00000004401	Mrpl13	99	81.921	ENSGAGG00000025331	-	99	81.921	Gopherus_agassizii
ENSRNOG00000004401	Mrpl13	100	78.652	ENSGGOG00000024629	MRPL13	100	78.652	Gorilla_gorilla
ENSRNOG00000004401	Mrpl13	100	74.157	ENSHBUG00000012259	mrpl13	99	74.157	Haplochromis_burtoni
ENSRNOG00000004401	Mrpl13	100	88.764	ENSHGLG00000007021	MRPL13	100	88.764	Heterocephalus_glaber_female
ENSRNOG00000004401	Mrpl13	100	88.764	ENSHGLG00100016348	MRPL13	100	88.764	Heterocephalus_glaber_male
ENSRNOG00000004401	Mrpl13	100	74.157	ENSHCOG00000012037	mrpl13	99	74.157	Hippocampus_comes
ENSRNOG00000004401	Mrpl13	100	73.596	ENSIPUG00000009071	mrpl13	99	73.596	Ictalurus_punctatus
ENSRNOG00000004401	Mrpl13	100	92.135	ENSSTOG00000014264	MRPL13	100	92.135	Ictidomys_tridecemlineatus
ENSRNOG00000004401	Mrpl13	100	89.326	ENSJJAG00000019308	Mrpl13	100	89.326	Jaculus_jaculus
ENSRNOG00000004401	Mrpl13	100	75.843	ENSKMAG00000018091	mrpl13	99	75.843	Kryptolebias_marmoratus
ENSRNOG00000004401	Mrpl13	100	73.034	ENSLBEG00000006340	mrpl13	99	73.034	Labrus_bergylta
ENSRNOG00000004401	Mrpl13	97	78.488	ENSLACG00000015467	MRPL13	98	78.488	Latimeria_chalumnae
ENSRNOG00000004401	Mrpl13	100	78.652	ENSLOCG00000009210	mrpl13	99	78.652	Lepisosteus_oculatus
ENSRNOG00000004401	Mrpl13	99	89.205	ENSLAFG00000012985	MRPL13	99	89.205	Loxodonta_africana
ENSRNOG00000004401	Mrpl13	100	90.449	ENSMFAG00000009755	MRPL13	100	90.449	Macaca_fascicularis
ENSRNOG00000004401	Mrpl13	100	90.449	ENSMMUG00000002599	MRPL13	100	90.449	Macaca_mulatta
ENSRNOG00000004401	Mrpl13	100	90.449	ENSMNEG00000034159	MRPL13	100	90.449	Macaca_nemestrina
ENSRNOG00000004401	Mrpl13	100	90.449	ENSMLEG00000009613	MRPL13	100	90.449	Mandrillus_leucophaeus
ENSRNOG00000004401	Mrpl13	100	75.281	ENSMAMG00000023991	mrpl13	99	75.281	Mastacembelus_armatus
ENSRNOG00000004401	Mrpl13	100	73.596	ENSMZEG00005025500	mrpl13	99	73.596	Maylandia_zebra
ENSRNOG00000004401	Mrpl13	55	97.959	ENSMAUG00000009122	-	100	97.959	Mesocricetus_auratus
ENSRNOG00000004401	Mrpl13	99	88.636	ENSMAUG00000015546	-	99	88.636	Mesocricetus_auratus
ENSRNOG00000004401	Mrpl13	100	90.449	ENSMICG00000014630	MRPL13	100	90.449	Microcebus_murinus
ENSRNOG00000004401	Mrpl13	100	94.944	ENSMOCG00000018794	Mrpl13	100	94.944	Microtus_ochrogaster
ENSRNOG00000004401	Mrpl13	100	76.404	ENSMMOG00000008934	mrpl13	99	76.404	Mola_mola
ENSRNOG00000004401	Mrpl13	100	88.764	ENSMODG00000002300	MRPL13	100	88.764	Monodelphis_domestica
ENSRNOG00000004401	Mrpl13	96	76.023	ENSMALG00000008122	mrpl13	100	76.023	Monopterus_albus
ENSRNOG00000004401	Mrpl13	100	95.506	MGP_CAROLIEiJ_G0019799	Mrpl13	100	95.918	Mus_caroli
ENSRNOG00000004401	Mrpl13	100	96.067	ENSMUSG00000022370	Mrpl13	100	96.939	Mus_musculus
ENSRNOG00000004401	Mrpl13	100	94.944	MGP_PahariEiJ_G0019809	Mrpl13	100	95.918	Mus_pahari
ENSRNOG00000004401	Mrpl13	100	96.067	MGP_SPRETEiJ_G0020696	Mrpl13	100	96.939	Mus_spretus
ENSRNOG00000004401	Mrpl13	98	90.857	ENSMPUG00000001080	MRPL13	98	90.857	Mustela_putorius_furo
ENSRNOG00000004401	Mrpl13	100	91.573	ENSMLUG00000009756	MRPL13	100	91.573	Myotis_lucifugus
ENSRNOG00000004401	Mrpl13	100	94.382	ENSNGAG00000024334	Mrpl13	100	94.382	Nannospalax_galili
ENSRNOG00000004401	Mrpl13	100	73.596	ENSNBRG00000021965	mrpl13	99	73.596	Neolamprologus_brichardi
ENSRNOG00000004401	Mrpl13	100	89.888	ENSNLEG00000028268	MRPL13	100	89.888	Nomascus_leucogenys
ENSRNOG00000004401	Mrpl13	96	52.047	ENSMEUG00000004590	-	100	52.047	Notamacropus_eugenii
ENSRNOG00000004401	Mrpl13	99	91.477	ENSOPRG00000015721	MRPL13	100	91.477	Ochotona_princeps
ENSRNOG00000004401	Mrpl13	100	88.764	ENSODEG00000001950	MRPL13	100	88.764	Octodon_degus
ENSRNOG00000004401	Mrpl13	100	88.764	ENSOANG00000000414	MRPL13	99	88.764	Ornithorhynchus_anatinus
ENSRNOG00000004401	Mrpl13	100	89.888	ENSOCUG00000016189	MRPL13	100	89.888	Oryctolagus_cuniculus
ENSRNOG00000004401	Mrpl13	100	73.034	ENSORLG00000004647	mrpl13	99	73.034	Oryzias_latipes
ENSRNOG00000004401	Mrpl13	100	73.596	ENSORLG00020022623	mrpl13	99	73.596	Oryzias_latipes_hni
ENSRNOG00000004401	Mrpl13	97	75.000	ENSORLG00015008036	mrpl13	83	75.000	Oryzias_latipes_hsok
ENSRNOG00000004401	Mrpl13	100	73.034	ENSOMEG00000011732	mrpl13	99	73.034	Oryzias_melastigma
ENSRNOG00000004401	Mrpl13	100	88.764	ENSOGAG00000014284	MRPL13	99	88.764	Otolemur_garnettii
ENSRNOG00000004401	Mrpl13	97	89.535	ENSOARG00000017405	-	87	89.535	Ovis_aries
ENSRNOG00000004401	Mrpl13	100	87.079	ENSOARG00000019181	-	100	87.079	Ovis_aries
ENSRNOG00000004401	Mrpl13	100	89.888	ENSPPAG00000043579	MRPL13	100	89.888	Pan_paniscus
ENSRNOG00000004401	Mrpl13	100	90.449	ENSPPRG00000024807	MRPL13	100	90.449	Panthera_pardus
ENSRNOG00000004401	Mrpl13	100	90.449	ENSPTIG00000021819	MRPL13	100	90.449	Panthera_tigris_altaica
ENSRNOG00000004401	Mrpl13	100	89.888	ENSPTRG00000020541	MRPL13	100	89.888	Pan_troglodytes
ENSRNOG00000004401	Mrpl13	100	90.449	ENSPANG00000001115	MRPL13	100	90.449	Papio_anubis
ENSRNOG00000004401	Mrpl13	100	77.528	ENSPKIG00000018874	mrpl13	99	77.528	Paramormyrops_kingsleyae
ENSRNOG00000004401	Mrpl13	94	82.738	ENSPSIG00000008016	MRPL13	99	82.738	Pelodiscus_sinensis
ENSRNOG00000004401	Mrpl13	100	74.719	ENSPMGG00000022710	mrpl13	99	74.719	Periophthalmus_magnuspinnatus
ENSRNOG00000004401	Mrpl13	100	95.506	ENSPEMG00000016375	Mrpl13	100	95.506	Peromyscus_maniculatus_bairdii
ENSRNOG00000004401	Mrpl13	99	68.182	ENSPMAG00000007735	-	98	68.182	Petromyzon_marinus
ENSRNOG00000004401	Mrpl13	100	85.955	ENSPCIG00000019489	MRPL13	100	85.955	Phascolarctos_cinereus
ENSRNOG00000004401	Mrpl13	100	74.157	ENSPFOG00000010630	mrpl13	99	74.157	Poecilia_formosa
ENSRNOG00000004401	Mrpl13	100	74.157	ENSPLAG00000013671	mrpl13	99	74.157	Poecilia_latipinna
ENSRNOG00000004401	Mrpl13	100	74.157	ENSPMEG00000002019	mrpl13	99	74.157	Poecilia_mexicana
ENSRNOG00000004401	Mrpl13	100	73.596	ENSPREG00000009510	mrpl13	99	73.596	Poecilia_reticulata
ENSRNOG00000004401	Mrpl13	58	82.692	ENSPPYG00000018847	-	88	82.692	Pongo_abelii
ENSRNOG00000004401	Mrpl13	100	91.011	ENSPCAG00000001541	MRPL13	100	91.011	Procavia_capensis
ENSRNOG00000004401	Mrpl13	74	93.130	ENSPCOG00000016230	MRPL13	92	93.130	Propithecus_coquereli
ENSRNOG00000004401	Mrpl13	100	83.146	ENSPVAG00000003719	MRPL13	100	83.146	Pteropus_vampyrus
ENSRNOG00000004401	Mrpl13	100	74.157	ENSPNYG00000004669	mrpl13	99	74.157	Pundamilia_nyererei
ENSRNOG00000004401	Mrpl13	100	71.910	ENSPNAG00000009319	mrpl13	99	71.910	Pygocentrus_nattereri
ENSRNOG00000004401	Mrpl13	97	78.161	ENSRBIG00000035341	MRPL13	98	78.161	Rhinopithecus_bieti
ENSRNOG00000004401	Mrpl13	100	90.449	ENSRROG00000044613	MRPL13	100	90.449	Rhinopithecus_roxellana
ENSRNOG00000004401	Mrpl13	100	89.326	ENSSBOG00000003037	MRPL13	100	89.326	Saimiri_boliviensis_boliviensis
ENSRNOG00000004401	Mrpl13	100	78.652	ENSSFOG00015005149	mrpl13	99	78.652	Scleropages_formosus
ENSRNOG00000004401	Mrpl13	100	73.034	ENSSMAG00000002558	mrpl13	99	73.034	Scophthalmus_maximus
ENSRNOG00000004401	Mrpl13	100	75.843	ENSSDUG00000016507	mrpl13	99	75.843	Seriola_dumerili
ENSRNOG00000004401	Mrpl13	100	76.404	ENSSLDG00000022405	mrpl13	99	76.404	Seriola_lalandi_dorsalis
ENSRNOG00000004401	Mrpl13	67	94.167	ENSSARG00000014236	MRPL13	100	94.167	Sorex_araneus
ENSRNOG00000004401	Mrpl13	99	80.682	ENSSPUG00000008445	MRPL13	98	80.682	Sphenodon_punctatus
ENSRNOG00000004401	Mrpl13	100	74.719	ENSSPAG00000013067	mrpl13	99	74.719	Stegastes_partitus
ENSRNOG00000004401	Mrpl13	100	93.258	ENSSSCG00000005996	MRPL13	90	93.258	Sus_scrofa
ENSRNOG00000004401	Mrpl13	100	73.596	ENSTRUG00000023240	mrpl13	99	73.596	Takifugu_rubripes
ENSRNOG00000004401	Mrpl13	100	59.777	ENSTNIG00000009643	mrpl13	100	59.777	Tetraodon_nigroviridis
ENSRNOG00000004401	Mrpl13	95	71.598	ENSTBEG00000004571	MRPL13	100	71.598	Tupaia_belangeri
ENSRNOG00000004401	Mrpl13	100	92.135	ENSTTRG00000005939	MRPL13	100	92.135	Tursiops_truncatus
ENSRNOG00000004401	Mrpl13	97	78.736	ENSUAMG00000009636	MRPL13	100	78.736	Ursus_americanus
ENSRNOG00000004401	Mrpl13	100	91.573	ENSUMAG00000021939	MRPL13	100	91.573	Ursus_maritimus
ENSRNOG00000004401	Mrpl13	100	80.899	ENSVPAG00000000774	MRPL13	100	80.899	Vicugna_pacos
ENSRNOG00000004401	Mrpl13	97	77.907	ENSVVUG00000016056	MRPL13	100	77.907	Vulpes_vulpes
ENSRNOG00000004401	Mrpl13	83	70.667	ENSXETG00000025658	mrpl13	100	70.667	Xenopus_tropicalis
ENSRNOG00000004401	Mrpl13	100	73.596	ENSXCOG00000016141	mrpl13	99	73.596	Xiphophorus_couchianus
ENSRNOG00000004401	Mrpl13	100	73.596	ENSXMAG00000010846	mrpl13	99	73.596	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005761	mitochondrial ribosome	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0017148	negative regulation of translation	21873635.	IBA	Process