EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004515 (Gene tree)
Gene ID: 289740
Gene Symbol: Pes1
Alias: LOC289740|MGC125075
Full Name: pescadillo ribosomal biogenesis factor 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 16379 bases
Position: chr14:84211600-84227978
Accession: 1559814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000005996	Pescadillo_N	PF06732.11	1.9e-126	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000005996	-	2081	-	ENSRNOP00000005996	586 (aa)	-	Q3B8N8

Gene Model

Click here to download ENSRNOG00000004515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004515's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004515	Pes1	99	89.608	ENSG00000100029	PES1	100	92.593	Homo_sapiens
ENSRNOG00000004515	Pes1	98	72.396	ENSAPOG00000010054	pes	99	72.184	Acanthochromis_polyacanthus
ENSRNOG00000004515	Pes1	100	88.625	ENSAMEG00000007417	PES1	100	88.285	Ailuropoda_melanoleuca
ENSRNOG00000004515	Pes1	98	71.875	ENSACIG00000017610	pes	99	70.648	Amphilophus_citrinellus
ENSRNOG00000004515	Pes1	98	71.181	ENSAOCG00000008883	pes	99	70.648	Amphiprion_ocellaris
ENSRNOG00000004515	Pes1	98	71.528	ENSAPEG00000022652	pes	99	70.990	Amphiprion_percula
ENSRNOG00000004515	Pes1	98	69.444	ENSATEG00000007439	pes	99	69.072	Anabas_testudineus
ENSRNOG00000004515	Pes1	93	74.635	ENSAPLG00000014852	PES1	99	73.561	Anas_platyrhynchos
ENSRNOG00000004515	Pes1	98	75.043	ENSACAG00000009723	PES1	99	76.523	Anolis_carolinensis
ENSRNOG00000004515	Pes1	99	89.438	ENSANAG00000036411	PES1	99	89.438	Aotus_nancymaae
ENSRNOG00000004515	Pes1	98	71.924	ENSANAG00000021598	-	94	72.964	Aotus_nancymaae
ENSRNOG00000004515	Pes1	98	71.577	ENSACLG00000000815	pes	99	70.478	Astatotilapia_calliptera
ENSRNOG00000004515	Pes1	99	63.230	ENSAMXG00000001216	pes	99	62.415	Astyanax_mexicanus
ENSRNOG00000004515	Pes1	100	81.804	ENSBTAG00000007728	PES1	100	83.522	Bos_taurus
ENSRNOG00000004515	Pes1	77	50.661	WBGene00003063	lpd-7	81	51.656	Caenorhabditis_elegans
ENSRNOG00000004515	Pes1	99	89.779	ENSCJAG00000010617	PES1	99	89.949	Callithrix_jacchus
ENSRNOG00000004515	Pes1	100	88.586	ENSCAFG00000012792	PES1	100	88.756	Canis_familiaris
ENSRNOG00000004515	Pes1	100	88.737	ENSCAFG00020000977	PES1	100	88.908	Canis_lupus_dingo
ENSRNOG00000004515	Pes1	100	87.436	ENSCHIG00000015760	PES1	100	87.606	Capra_hircus
ENSRNOG00000004515	Pes1	100	89.267	ENSTSYG00000009798	PES1	100	89.267	Carlito_syrichta
ENSRNOG00000004515	Pes1	99	75.042	ENSCAPG00000012218	-	99	75.042	Cavia_aperea
ENSRNOG00000004515	Pes1	86	87.129	ENSCAPG00000007736	-	91	86.680	Cavia_aperea
ENSRNOG00000004515	Pes1	99	75.212	ENSCPOG00000022594	-	99	75.212	Cavia_porcellus
ENSRNOG00000004515	Pes1	100	81.942	ENSCPOG00000039303	-	100	82.624	Cavia_porcellus
ENSRNOG00000004515	Pes1	100	88.027	ENSCPOG00000003565	-	100	88.475	Cavia_porcellus
ENSRNOG00000004515	Pes1	99	89.267	ENSCCAG00000026457	PES1	99	89.438	Cebus_capucinus
ENSRNOG00000004515	Pes1	99	89.134	ENSCATG00000036948	PES1	99	88.795	Cercocebus_atys
ENSRNOG00000004515	Pes1	100	88.756	ENSCLAG00000010775	PES1	100	88.927	Chinchilla_lanigera
ENSRNOG00000004515	Pes1	99	88.946	ENSCSAG00000009207	PES1	99	88.946	Chlorocebus_sabaeus
ENSRNOG00000004515	Pes1	99	79.082	ENSCPBG00000007548	PES1	99	78.571	Chrysemys_picta_bellii
ENSRNOG00000004515	Pes1	99	89.420	ENSCANG00000039970	PES1	99	89.932	Colobus_angolensis_palliatus
ENSRNOG00000004515	Pes1	61	96.620	ENSCGRG00000015052	Pes1	97	96.620	Cricetulus_griseus_crigri
ENSRNOG00000004515	Pes1	98	72.569	ENSCSEG00000017612	pes	100	72.184	Cynoglossus_semilaevis
ENSRNOG00000004515	Pes1	98	72.097	ENSCVAG00000011600	pes	99	70.990	Cyprinodon_variegatus
ENSRNOG00000004515	Pes1	97	71.777	ENSDARG00000018902	pes	99	71.429	Danio_rerio
ENSRNOG00000004515	Pes1	98	57.812	ENSDNOG00000031909	-	100	57.812	Dasypus_novemcinctus
ENSRNOG00000004515	Pes1	100	87.905	ENSDNOG00000015709	-	100	87.564	Dasypus_novemcinctus
ENSRNOG00000004515	Pes1	95	88.790	ENSDORG00000016636	Pes1	100	89.324	Dipodomys_ordii
ENSRNOG00000004515	Pes1	76	52.412	FBgn0032138	CG4364	70	53.153	Drosophila_melanogaster
ENSRNOG00000004515	Pes1	81	59.465	ENSEBUG00000010234	pes	99	58.678	Eptatretus_burgeri
ENSRNOG00000004515	Pes1	95	70.766	ENSEASG00005010295	PES1	100	69.322	Equus_asinus_asinus
ENSRNOG00000004515	Pes1	100	88.739	ENSECAG00000002578	PES1	100	87.899	Equus_caballus
ENSRNOG00000004515	Pes1	98	71.478	ENSELUG00000003253	pes	99	71.284	Esox_lucius
ENSRNOG00000004515	Pes1	100	89.438	ENSFCAG00000008655	PES1	100	89.438	Felis_catus
ENSRNOG00000004515	Pes1	93	74.955	ENSFALG00000006909	PES1	99	74.234	Ficedula_albicollis
ENSRNOG00000004515	Pes1	100	89.848	ENSFDAG00000019029	PES1	100	89.171	Fukomys_damarensis
ENSRNOG00000004515	Pes1	98	67.361	ENSFHEG00000000287	pes	99	66.894	Fundulus_heteroclitus
ENSRNOG00000004515	Pes1	99	69.349	ENSGMOG00000013010	pes	99	69.521	Gadus_morhua
ENSRNOG00000004515	Pes1	98	78.299	ENSGALG00000007778	PES1	99	77.969	Gallus_gallus
ENSRNOG00000004515	Pes1	98	71.826	ENSGAFG00000012399	pes	99	71.282	Gambusia_affinis
ENSRNOG00000004515	Pes1	99	69.625	ENSGACG00000009302	pes	99	68.942	Gasterosteus_aculeatus
ENSRNOG00000004515	Pes1	99	78.401	ENSGAGG00000010897	PES1	99	78.061	Gopherus_agassizii
ENSRNOG00000004515	Pes1	99	68.825	ENSGGOG00000028472	-	99	68.995	Gorilla_gorilla
ENSRNOG00000004515	Pes1	99	89.779	ENSGGOG00000008530	PES1	99	89.438	Gorilla_gorilla
ENSRNOG00000004515	Pes1	82	83.871	ENSHBUG00000008000	pes	98	83.871	Haplochromis_burtoni
ENSRNOG00000004515	Pes1	100	89.848	ENSHGLG00000018472	PES1	100	89.509	Heterocephalus_glaber_female
ENSRNOG00000004515	Pes1	100	89.412	ENSHGLG00100004887	PES1	100	89.286	Heterocephalus_glaber_male
ENSRNOG00000004515	Pes1	99	69.468	ENSHCOG00000016666	pes	99	68.096	Hippocampus_comes
ENSRNOG00000004515	Pes1	98	70.312	ENSIPUG00000020261	pes1	99	69.744	Ictalurus_punctatus
ENSRNOG00000004515	Pes1	100	89.949	ENSSTOG00000013937	PES1	100	89.949	Ictidomys_tridecemlineatus
ENSRNOG00000004515	Pes1	100	89.438	ENSJJAG00000001782	-	100	89.267	Jaculus_jaculus
ENSRNOG00000004515	Pes1	77	86.486	ENSJJAG00000010640	-	97	83.069	Jaculus_jaculus
ENSRNOG00000004515	Pes1	98	72.617	ENSKMAG00000015285	pes	99	72.014	Kryptolebias_marmoratus
ENSRNOG00000004515	Pes1	98	66.724	ENSLBEG00000012366	pes	99	67.230	Labrus_bergylta
ENSRNOG00000004515	Pes1	98	74.132	ENSLACG00000017116	PES1	99	73.585	Latimeria_chalumnae
ENSRNOG00000004515	Pes1	98	66.087	ENSLOCG00000003935	pes	99	64.906	Lepisosteus_oculatus
ENSRNOG00000004515	Pes1	79	65.702	ENSLAFG00000022882	PES1	71	82.635	Loxodonta_africana
ENSRNOG00000004515	Pes1	99	89.438	ENSMFAG00000044708	PES1	99	89.779	Macaca_fascicularis
ENSRNOG00000004515	Pes1	99	89.267	ENSMMUG00000017562	PES1	99	89.608	Macaca_mulatta
ENSRNOG00000004515	Pes1	99	89.438	ENSMNEG00000029489	PES1	99	89.779	Macaca_nemestrina
ENSRNOG00000004515	Pes1	99	65.195	ENSMLEG00000030317	-	99	64.626	Mandrillus_leucophaeus
ENSRNOG00000004515	Pes1	99	88.946	ENSMLEG00000038584	PES1	99	88.946	Mandrillus_leucophaeus
ENSRNOG00000004515	Pes1	98	71.750	ENSMAMG00000014668	pes	99	71.160	Mastacembelus_armatus
ENSRNOG00000004515	Pes1	100	94.037	ENSMAUG00000018433	Pes1	100	92.504	Mesocricetus_auratus
ENSRNOG00000004515	Pes1	100	88.756	ENSMICG00000010123	PES1	100	89.097	Microcebus_murinus
ENSRNOG00000004515	Pes1	100	94.388	ENSMOCG00000021971	Pes1	100	93.537	Microtus_ochrogaster
ENSRNOG00000004515	Pes1	98	64.111	ENSMMOG00000017812	pes	99	63.870	Mola_mola
ENSRNOG00000004515	Pes1	98	79.094	ENSMODG00000009483	PES1	99	78.425	Monodelphis_domestica
ENSRNOG00000004515	Pes1	98	71.231	ENSMALG00000012929	pes	99	70.137	Monopterus_albus
ENSRNOG00000004515	Pes1	100	87.031	MGP_CAROLIEiJ_G0016021	Pes1	100	87.031	Mus_caroli
ENSRNOG00000004515	Pes1	100	93.174	ENSMUSG00000020430	Pes1	100	94.027	Mus_musculus
ENSRNOG00000004515	Pes1	100	100.000	MGP_PahariEiJ_G0016870	-	100	95.741	Mus_pahari
ENSRNOG00000004515	Pes1	100	92.243	MGP_SPRETEiJ_G0016862	Pes1	100	91.568	Mus_spretus
ENSRNOG00000004515	Pes1	100	89.267	ENSMPUG00000012950	PES1	100	88.927	Mustela_putorius_furo
ENSRNOG00000004515	Pes1	100	91.141	ENSNGAG00000015282	Pes1	100	91.652	Nannospalax_galili
ENSRNOG00000004515	Pes1	98	71.528	ENSNBRG00000006301	pes	99	70.478	Neolamprologus_brichardi
ENSRNOG00000004515	Pes1	99	81.803	ENSNLEG00000003908	PES1	99	81.463	Nomascus_leucogenys
ENSRNOG00000004515	Pes1	97	76.532	ENSMEUG00000011656	PES1	90	86.456	Notamacropus_eugenii
ENSRNOG00000004515	Pes1	100	85.835	ENSOPRG00000000636	PES1	100	85.835	Ochotona_princeps
ENSRNOG00000004515	Pes1	100	88.156	ENSODEG00000003187	PES1	100	87.986	Octodon_degus
ENSRNOG00000004515	Pes1	98	72.743	ENSONIG00000013543	pes	99	72.184	Oreochromis_niloticus
ENSRNOG00000004515	Pes1	62	74.380	ENSOANG00000012901	-	98	73.210	Ornithorhynchus_anatinus
ENSRNOG00000004515	Pes1	99	86.542	ENSOCUG00000009658	PES1	100	87.394	Oryctolagus_cuniculus
ENSRNOG00000004515	Pes1	98	71.404	ENSORLG00000007881	pes	100	70.528	Oryzias_latipes
ENSRNOG00000004515	Pes1	98	71.750	ENSORLG00020000368	pes	100	71.380	Oryzias_latipes_hni
ENSRNOG00000004515	Pes1	98	71.750	ENSORLG00015002220	pes	100	71.039	Oryzias_latipes_hsok
ENSRNOG00000004515	Pes1	98	72.569	ENSOMEG00000002922	pes	100	71.550	Oryzias_melastigma
ENSRNOG00000004515	Pes1	98	86.678	ENSOGAG00000005804	PES1	100	86.371	Otolemur_garnettii
ENSRNOG00000004515	Pes1	95	68.750	ENSOARG00000008214	PES1	100	68.229	Ovis_aries
ENSRNOG00000004515	Pes1	99	89.779	ENSPPAG00000029696	PES1	99	89.438	Pan_paniscus
ENSRNOG00000004515	Pes1	100	89.779	ENSPPRG00000024146	PES1	100	89.779	Panthera_pardus
ENSRNOG00000004515	Pes1	76	87.054	ENSPTIG00000021654	PES1	100	87.054	Panthera_tigris_altaica
ENSRNOG00000004515	Pes1	99	62.075	ENSPTRG00000045557	-	99	62.075	Pan_troglodytes
ENSRNOG00000004515	Pes1	99	89.949	ENSPTRG00000014251	PES1	99	89.608	Pan_troglodytes
ENSRNOG00000004515	Pes1	99	89.116	ENSPANG00000009607	PES1	99	89.116	Papio_anubis
ENSRNOG00000004515	Pes1	97	69.019	ENSPKIG00000024750	pes	99	68.571	Paramormyrops_kingsleyae
ENSRNOG00000004515	Pes1	98	71.080	ENSPMGG00000019024	pes	100	69.610	Periophthalmus_magnuspinnatus
ENSRNOG00000004515	Pes1	100	91.864	ENSPEMG00000012585	Pes1	100	92.203	Peromyscus_maniculatus_bairdii
ENSRNOG00000004515	Pes1	98	79.617	ENSPCIG00000023994	PES1	99	79.110	Phascolarctos_cinereus
ENSRNOG00000004515	Pes1	98	71.528	ENSPFOG00000014821	pes	99	71.331	Poecilia_formosa
ENSRNOG00000004515	Pes1	98	71.701	ENSPLAG00000003811	pes	99	71.502	Poecilia_latipinna
ENSRNOG00000004515	Pes1	98	71.701	ENSPMEG00000019878	pes	99	71.331	Poecilia_mexicana
ENSRNOG00000004515	Pes1	98	69.861	ENSPREG00000022586	pes	99	69.468	Poecilia_reticulata
ENSRNOG00000004515	Pes1	99	89.779	ENSPPYG00000011716	PES1	99	89.267	Pongo_abelii
ENSRNOG00000004515	Pes1	75	91.026	ENSPCAG00000011542	PES1	75	91.026	Procavia_capensis
ENSRNOG00000004515	Pes1	100	88.776	ENSPCOG00000016226	PES1	100	89.116	Propithecus_coquereli
ENSRNOG00000004515	Pes1	99	69.072	ENSPNAG00000020800	pes	99	68.718	Pygocentrus_nattereri
ENSRNOG00000004515	Pes1	99	65.812	ENSRBIG00000034572	-	99	64.505	Rhinopithecus_bieti
ENSRNOG00000004515	Pes1	99	88.908	ENSRBIG00000040634	PES1	99	88.908	Rhinopithecus_bieti
ENSRNOG00000004515	Pes1	99	88.908	ENSRROG00000028779	PES1	99	88.908	Rhinopithecus_roxellana
ENSRNOG00000004515	Pes1	72	44.009	YGR103W	NOP7	76	44.017	Saccharomyces_cerevisiae
ENSRNOG00000004515	Pes1	99	89.932	ENSSBOG00000026073	PES1	99	89.932	Saimiri_boliviensis_boliviensis
ENSRNOG00000004515	Pes1	96	79.401	ENSSHAG00000002920	PES1	96	79.225	Sarcophilus_harrisii
ENSRNOG00000004515	Pes1	98	68.512	ENSSFOG00015005010	pes1	99	67.863	Scleropages_formosus
ENSRNOG00000004515	Pes1	99	71.160	ENSSMAG00000012102	pes	99	71.331	Scophthalmus_maximus
ENSRNOG00000004515	Pes1	98	72.664	ENSSDUG00000013213	pes	99	72.232	Seriola_dumerili
ENSRNOG00000004515	Pes1	98	72.444	ENSSLDG00000025373	pes	99	72.526	Seriola_lalandi_dorsalis
ENSRNOG00000004515	Pes1	98	76.817	ENSSPUG00000018150	PES1	99	76.190	Sphenodon_punctatus
ENSRNOG00000004515	Pes1	98	72.270	ENSSPAG00000018970	pes	99	71.599	Stegastes_partitus
ENSRNOG00000004515	Pes1	100	85.284	ENSSSCG00000010010	PES1	100	86.213	Sus_scrofa
ENSRNOG00000004515	Pes1	63	65.691	ENSTGUG00000015553	PES1	100	66.223	Taeniopygia_guttata
ENSRNOG00000004515	Pes1	98	69.913	ENSTRUG00000015909	pes	99	69.521	Takifugu_rubripes
ENSRNOG00000004515	Pes1	99	57.904	ENSTNIG00000015898	pes	99	57.487	Tetraodon_nigroviridis
ENSRNOG00000004515	Pes1	99	87.565	ENSTBEG00000009825	PES1	99	87.392	Tupaia_belangeri
ENSRNOG00000004515	Pes1	95	85.383	ENSTTRG00000001543	PES1	100	85.918	Tursiops_truncatus
ENSRNOG00000004515	Pes1	100	89.304	ENSUAMG00000006854	PES1	100	88.795	Ursus_americanus
ENSRNOG00000004515	Pes1	100	87.458	ENSUMAG00000016429	PES1	100	87.124	Ursus_maritimus
ENSRNOG00000004515	Pes1	100	87.372	ENSVVUG00000029961	-	100	87.372	Vulpes_vulpes
ENSRNOG00000004515	Pes1	100	88.055	ENSVVUG00000002684	-	100	88.396	Vulpes_vulpes
ENSRNOG00000004515	Pes1	100	66.216	ENSXETG00000030097	PES1	100	66.216	Xenopus_tropicalis
ENSRNOG00000004515	Pes1	98	71.130	ENSXCOG00000017009	pes	99	70.427	Xiphophorus_couchianus
ENSRNOG00000004515	Pes1	98	70.957	ENSXMAG00000007708	pes	99	70.085	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	-	ISO	Process
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	-	ISS	Process
GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	-	ISO	Process
GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	-	ISS	Process
GO:0000793	condensed chromosome	-	IEA	Component
GO:0000793	condensed chromosome	-	ISO	Component
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005654	nucleoplasm	-	ISS	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005730	nucleolus	-	ISS	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006364	rRNA processing	-	ISO	Process
GO:0007000	nucleolus organization	-	IEA	Process
GO:0007000	nucleolus organization	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0008283	cell proliferation	-	ISO	Process
GO:0008283	cell proliferation	-	ISS	Process
GO:0030687	preribosome, large subunit precursor	-	ISO	Component
GO:0030687	preribosome, large subunit precursor	-	ISS	Component
GO:0033365	protein localization to organelle	-	IEA	Process
GO:0033365	protein localization to organelle	-	ISO	Process
GO:0042254	ribosome biogenesis	-	ISO	Process
GO:0043021	ribonucleoprotein complex binding	-	IEA	Function
GO:0051726	regulation of cell cycle	-	IEA	Process
GO:0051726	regulation of cell cycle	-	ISO	Process
GO:0070545	PeBoW complex	21873635.	IBA	Component
GO:0070545	PeBoW complex	-	ISO	Component
GO:0070545	PeBoW complex	-	ISS	Component