EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004549 (Gene tree)
Gene ID: 287595
Gene Symbol: Dhx40
Alias: MGC94894
Full Name: DEAH-box helicase 40
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 38443 bases
Position: chr10:74080590-74119032
Accession: 1359618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000006926	DEAD	PF00270.29	8.1e-09	1	1
ENSRNOP00000075131	DEAD	PF00270.29	8.1e-09	1	1
ENSRNOP00000006926	HA2	PF04408.23	3.8e-15	1	1
ENSRNOP00000075131	HA2	PF04408.23	3.8e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000085712	-	3627	-	ENSRNOP00000075131	779 (aa)	-	Q5XI69
ENSRNOT00000006926	-	2798	-	ENSRNOP00000006926	779 (aa)	-	Q5XI69

Gene Model

Click here to download ENSRNOG00000004549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000004549	Dhx40	80	36.269	ENSRNOG00000054272	Dhx57	51	36.269
ENSRNOG00000004549	Dhx40	84	40.429	ENSRNOG00000014619	Dhx38	54	38.549
ENSRNOG00000004549	Dhx40	86	42.012	ENSRNOG00000030157	Dhx16	61	42.012
ENSRNOG00000004549	Dhx40	85	43.243	ENSRNOG00000020772	Dhx8	51	43.798
ENSRNOG00000004549	Dhx40	83	42.041	ENSRNOG00000022171	Dhx37	64	42.041
ENSRNOG00000004549	Dhx40	82	41.564	ENSRNOG00000003844	Dhx15	78	41.564
ENSRNOG00000004549	Dhx40	83	37.195	ENSRNOG00000007054	Dhx33	89	37.195
ENSRNOG00000004549	Dhx40	90	35.763	ENSRNOG00000015928	Dhx35	99	35.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004549	Dhx40	100	97.561	ENSG00000108406	DHX40	100	97.561	Homo_sapiens
ENSRNOG00000004549	Dhx40	91	66.854	ENSAPOG00000018707	dhx40	98	66.667	Acanthochromis_polyacanthus
ENSRNOG00000004549	Dhx40	100	97.561	ENSAMEG00000011567	DHX40	100	97.561	Ailuropoda_melanoleuca
ENSRNOG00000004549	Dhx40	91	65.871	ENSACIG00000020220	dhx40	98	65.698	Amphilophus_citrinellus
ENSRNOG00000004549	Dhx40	91	66.713	ENSAOCG00000000250	dhx40	98	66.528	Amphiprion_ocellaris
ENSRNOG00000004549	Dhx40	91	66.854	ENSAPEG00000022898	dhx40	97	66.667	Amphiprion_percula
ENSRNOG00000004549	Dhx40	91	66.011	ENSATEG00000023287	dhx40	98	65.837	Anabas_testudineus
ENSRNOG00000004549	Dhx40	85	72.247	ENSAPLG00000013368	DHX40	100	72.247	Anas_platyrhynchos
ENSRNOG00000004549	Dhx40	94	67.804	ENSACAG00000012418	DHX40	99	67.804	Anolis_carolinensis
ENSRNOG00000004549	Dhx40	100	97.689	ENSANAG00000019888	DHX40	100	97.689	Aotus_nancymaae
ENSRNOG00000004549	Dhx40	91	66.011	ENSACLG00000024213	dhx40	97	66.111	Astatotilapia_calliptera
ENSRNOG00000004549	Dhx40	77	64.775	ENSAMXG00000002031	dhx40	95	64.775	Astyanax_mexicanus
ENSRNOG00000004549	Dhx40	100	97.689	ENSBTAG00000017868	DHX40	100	97.689	Bos_taurus
ENSRNOG00000004549	Dhx40	100	97.433	ENSCJAG00000001554	DHX40	100	97.433	Callithrix_jacchus
ENSRNOG00000004549	Dhx40	100	97.689	ENSCAFG00000017625	DHX40	100	96.927	Canis_familiaris
ENSRNOG00000004549	Dhx40	100	97.818	ENSCAFG00020026016	DHX40	91	97.818	Canis_lupus_dingo
ENSRNOG00000004549	Dhx40	100	97.818	ENSCHIG00000016173	DHX40	100	97.818	Capra_hircus
ENSRNOG00000004549	Dhx40	100	97.561	ENSTSYG00000034797	DHX40	100	98.273	Carlito_syrichta
ENSRNOG00000004549	Dhx40	90	83.691	ENSCAPG00000016034	DHX40	99	83.691	Cavia_aperea
ENSRNOG00000004549	Dhx40	100	95.507	ENSCPOG00000003432	DHX40	100	95.507	Cavia_porcellus
ENSRNOG00000004549	Dhx40	91	97.357	ENSCCAG00000028712	DHX40	100	97.357	Cebus_capucinus
ENSRNOG00000004549	Dhx40	100	93.231	ENSCATG00000030038	DHX40	100	93.231	Cercocebus_atys
ENSRNOG00000004549	Dhx40	100	98.331	ENSCLAG00000012016	DHX40	100	98.331	Chinchilla_lanigera
ENSRNOG00000004549	Dhx40	82	93.730	ENSCSAG00000005860	DHX40	99	93.730	Chlorocebus_sabaeus
ENSRNOG00000004549	Dhx40	95	97.841	ENSCHOG00000004423	DHX40	100	97.841	Choloepus_hoffmanni
ENSRNOG00000004549	Dhx40	97	71.969	ENSCPBG00000006085	DHX40	97	74.211	Chrysemys_picta_bellii
ENSRNOG00000004549	Dhx40	100	97.818	ENSCANG00000038492	DHX40	100	97.818	Colobus_angolensis_palliatus
ENSRNOG00000004549	Dhx40	100	99.358	ENSCGRG00001000389	Dhx40	100	99.358	Cricetulus_griseus_chok1gshd
ENSRNOG00000004549	Dhx40	100	99.358	ENSCGRG00000009491	Dhx40	100	99.358	Cricetulus_griseus_crigri
ENSRNOG00000004549	Dhx40	92	65.603	ENSCSEG00000002696	dhx40	98	65.603	Cynoglossus_semilaevis
ENSRNOG00000004549	Dhx40	92	66.667	ENSCVAG00000018991	dhx40	97	66.667	Cyprinodon_variegatus
ENSRNOG00000004549	Dhx40	94	66.255	ENSDARG00000041586	dhx40	99	66.255	Danio_rerio
ENSRNOG00000004549	Dhx40	100	97.818	ENSDNOG00000025497	DHX40	100	97.818	Dasypus_novemcinctus
ENSRNOG00000004549	Dhx40	100	94.608	ENSDORG00000006521	Dhx40	100	94.608	Dipodomys_ordii
ENSRNOG00000004549	Dhx40	87	93.333	ENSETEG00000018771	DHX40	87	93.333	Echinops_telfairi
ENSRNOG00000004549	Dhx40	100	97.818	ENSEASG00005002476	DHX40	100	97.818	Equus_asinus_asinus
ENSRNOG00000004549	Dhx40	100	97.689	ENSECAG00000018606	DHX40	100	97.689	Equus_caballus
ENSRNOG00000004549	Dhx40	100	93.325	ENSEEUG00000002531	DHX40	100	93.325	Erinaceus_europaeus
ENSRNOG00000004549	Dhx40	92	65.560	ENSELUG00000008644	dhx40	97	65.560	Esox_lucius
ENSRNOG00000004549	Dhx40	100	97.946	ENSFCAG00000001409	DHX40	100	97.946	Felis_catus
ENSRNOG00000004549	Dhx40	94	69.220	ENSFALG00000005587	DHX40	99	69.220	Ficedula_albicollis
ENSRNOG00000004549	Dhx40	100	98.331	ENSFDAG00000017214	DHX40	100	98.331	Fukomys_damarensis
ENSRNOG00000004549	Dhx40	92	65.090	ENSFHEG00000001190	dhx40	99	64.932	Fundulus_heteroclitus
ENSRNOG00000004549	Dhx40	91	62.797	ENSGMOG00000001188	dhx40	99	62.797	Gadus_morhua
ENSRNOG00000004549	Dhx40	81	70.411	ENSGALG00000005126	DHX40	100	70.411	Gallus_gallus
ENSRNOG00000004549	Dhx40	91	66.152	ENSGAFG00000014480	dhx40	98	65.975	Gambusia_affinis
ENSRNOG00000004549	Dhx40	93	64.883	ENSGACG00000006300	dhx40	99	65.145	Gasterosteus_aculeatus
ENSRNOG00000004549	Dhx40	93	73.590	ENSGAGG00000024012	DHX40	97	73.590	Gopherus_agassizii
ENSRNOG00000004549	Dhx40	91	66.152	ENSHBUG00000022398	dhx40	97	66.250	Haplochromis_burtoni
ENSRNOG00000004549	Dhx40	88	79.472	ENSHGLG00000006411	-	96	79.472	Heterocephalus_glaber_female
ENSRNOG00000004549	Dhx40	100	98.074	ENSHGLG00000006600	DHX40	100	98.074	Heterocephalus_glaber_female
ENSRNOG00000004549	Dhx40	88	79.619	ENSHGLG00100009091	-	96	79.619	Heterocephalus_glaber_male
ENSRNOG00000004549	Dhx40	100	96.534	ENSHGLG00100009935	-	100	96.534	Heterocephalus_glaber_male
ENSRNOG00000004549	Dhx40	92	64.771	ENSHCOG00000012913	dhx40	96	64.771	Hippocampus_comes
ENSRNOG00000004549	Dhx40	92	64.993	ENSIPUG00000015673	dhx40	97	64.993	Ictalurus_punctatus
ENSRNOG00000004549	Dhx40	100	92.169	ENSSTOG00000016219	DHX40	100	92.814	Ictidomys_tridecemlineatus
ENSRNOG00000004549	Dhx40	100	94.095	ENSJJAG00000010433	Dhx40	100	94.095	Jaculus_jaculus
ENSRNOG00000004549	Dhx40	91	66.199	ENSKMAG00000003505	dhx40	98	65.975	Kryptolebias_marmoratus
ENSRNOG00000004549	Dhx40	91	66.994	ENSLBEG00000018707	dhx40	98	67.083	Labrus_bergylta
ENSRNOG00000004549	Dhx40	94	67.930	ENSLACG00000008892	DHX40	98	67.930	Latimeria_chalumnae
ENSRNOG00000004549	Dhx40	92	63.122	ENSLOCG00000003916	dhx40	99	63.122	Lepisosteus_oculatus
ENSRNOG00000004549	Dhx40	100	97.818	ENSLAFG00000000087	DHX40	100	97.818	Loxodonta_africana
ENSRNOG00000004549	Dhx40	100	97.561	ENSMFAG00000041526	DHX40	100	97.959	Macaca_fascicularis
ENSRNOG00000004549	Dhx40	100	92.426	ENSMNEG00000043921	DHX40	100	92.426	Macaca_nemestrina
ENSRNOG00000004549	Dhx40	100	97.561	ENSMLEG00000043033	DHX40	100	97.959	Mandrillus_leucophaeus
ENSRNOG00000004549	Dhx40	91	66.011	ENSMAMG00000001985	dhx40	98	65.837	Mastacembelus_armatus
ENSRNOG00000004549	Dhx40	91	66.011	ENSMZEG00005013826	dhx40	97	66.111	Maylandia_zebra
ENSRNOG00000004549	Dhx40	82	70.186	ENSMGAG00000007238	DHX40	100	70.186	Meleagris_gallopavo
ENSRNOG00000004549	Dhx40	100	89.859	ENSMAUG00000014047	Dhx40	100	89.859	Mesocricetus_auratus
ENSRNOG00000004549	Dhx40	100	98.074	ENSMICG00000027647	DHX40	100	98.074	Microcebus_murinus
ENSRNOG00000004549	Dhx40	100	98.588	ENSMOCG00000022697	Dhx40	100	98.588	Microtus_ochrogaster
ENSRNOG00000004549	Dhx40	91	65.309	ENSMMOG00000005353	dhx40	97	65.278	Mola_mola
ENSRNOG00000004549	Dhx40	99	75.389	ENSMODG00000014468	DHX40	99	75.389	Monodelphis_domestica
ENSRNOG00000004549	Dhx40	92	66.113	ENSMALG00000012529	dhx40	98	66.113	Monopterus_albus
ENSRNOG00000004549	Dhx40	100	99.358	MGP_CAROLIEiJ_G0016920	Dhx40	100	99.358	Mus_caroli
ENSRNOG00000004549	Dhx40	100	99.230	ENSMUSG00000018425	Dhx40	100	99.230	Mus_musculus
ENSRNOG00000004549	Dhx40	100	99.487	MGP_PahariEiJ_G0018050	Dhx40	100	99.487	Mus_pahari
ENSRNOG00000004549	Dhx40	100	99.230	MGP_SPRETEiJ_G0017766	Dhx40	100	99.230	Mus_spretus
ENSRNOG00000004549	Dhx40	100	97.818	ENSMPUG00000015213	DHX40	100	97.818	Mustela_putorius_furo
ENSRNOG00000004549	Dhx40	100	95.897	ENSMLUG00000003644	DHX40	100	95.897	Myotis_lucifugus
ENSRNOG00000004549	Dhx40	100	98.588	ENSNGAG00000014507	Dhx40	100	98.588	Nannospalax_galili
ENSRNOG00000004549	Dhx40	91	65.871	ENSNBRG00000018144	dhx40	98	65.884	Neolamprologus_brichardi
ENSRNOG00000004549	Dhx40	72	82.500	ENSMEUG00000002887	-	88	82.500	Notamacropus_eugenii
ENSRNOG00000004549	Dhx40	100	98.074	ENSODEG00000013635	DHX40	100	98.074	Octodon_degus
ENSRNOG00000004549	Dhx40	92	66.066	ENSONIG00000005195	dhx40	100	66.066	Oreochromis_niloticus
ENSRNOG00000004549	Dhx40	95	76.344	ENSOANG00000008516	DHX40	99	76.344	Ornithorhynchus_anatinus
ENSRNOG00000004549	Dhx40	93	65.289	ENSORLG00000014185	dhx40	99	65.289	Oryzias_latipes
ENSRNOG00000004549	Dhx40	93	65.289	ENSORLG00015016235	dhx40	99	65.289	Oryzias_latipes_hsok
ENSRNOG00000004549	Dhx40	92	66.528	ENSOMEG00000006570	dhx40	99	66.528	Oryzias_melastigma
ENSRNOG00000004549	Dhx40	100	97.946	ENSOGAG00000007790	DHX40	100	97.946	Otolemur_garnettii
ENSRNOG00000004549	Dhx40	100	97.818	ENSOARG00000012632	DHX40	100	97.818	Ovis_aries
ENSRNOG00000004549	Dhx40	100	97.176	ENSPPAG00000032782	DHX40	100	97.176	Pan_paniscus
ENSRNOG00000004549	Dhx40	100	97.946	ENSPPRG00000010073	DHX40	100	97.946	Panthera_pardus
ENSRNOG00000004549	Dhx40	100	97.433	ENSPTIG00000006557	DHX40	100	97.959	Panthera_tigris_altaica
ENSRNOG00000004549	Dhx40	100	97.561	ENSPANG00000022266	DHX40	100	97.959	Papio_anubis
ENSRNOG00000004549	Dhx40	92	64.543	ENSPKIG00000013016	dhx40	97	64.543	Paramormyrops_kingsleyae
ENSRNOG00000004549	Dhx40	96	71.315	ENSPSIG00000010463	DHX40	95	71.315	Pelodiscus_sinensis
ENSRNOG00000004549	Dhx40	92	65.877	ENSPMGG00000015257	dhx40	97	65.877	Periophthalmus_magnuspinnatus
ENSRNOG00000004549	Dhx40	100	99.358	ENSPEMG00000013338	Dhx40	100	99.358	Peromyscus_maniculatus_bairdii
ENSRNOG00000004549	Dhx40	93	78.512	ENSPCIG00000021874	DHX40	95	78.512	Phascolarctos_cinereus
ENSRNOG00000004549	Dhx40	91	65.730	ENSPFOG00000006579	dhx40	98	65.560	Poecilia_formosa
ENSRNOG00000004549	Dhx40	91	65.730	ENSPLAG00000007062	dhx40	98	65.560	Poecilia_latipinna
ENSRNOG00000004549	Dhx40	91	65.871	ENSPMEG00000008446	dhx40	98	65.698	Poecilia_mexicana
ENSRNOG00000004549	Dhx40	92	65.837	ENSPREG00000005584	dhx40	98	65.837	Poecilia_reticulata
ENSRNOG00000004549	Dhx40	100	94.480	ENSPPYG00000008812	DHX40	100	94.480	Pongo_abelii
ENSRNOG00000004549	Dhx40	78	97.544	ENSPCAG00000006468	DHX40	83	97.544	Procavia_capensis
ENSRNOG00000004549	Dhx40	91	89.189	ENSPCOG00000008219	DHX40	100	89.189	Propithecus_coquereli
ENSRNOG00000004549	Dhx40	91	66.011	ENSPNYG00000013343	dhx40	97	66.111	Pundamilia_nyererei
ENSRNOG00000004549	Dhx40	92	61.506	ENSPNAG00000024815	dhx40	97	61.506	Pygocentrus_nattereri
ENSRNOG00000004549	Dhx40	100	97.433	ENSSBOG00000024911	DHX40	100	97.433	Saimiri_boliviensis_boliviensis
ENSRNOG00000004549	Dhx40	99	74.545	ENSSHAG00000016859	DHX40	99	74.545	Sarcophilus_harrisii
ENSRNOG00000004549	Dhx40	92	65.881	ENSSFOG00015003020	dhx40	97	66.297	Scleropages_formosus
ENSRNOG00000004549	Dhx40	91	66.014	ENSSMAG00000001178	dhx40	98	65.928	Scophthalmus_maximus
ENSRNOG00000004549	Dhx40	91	66.152	ENSSDUG00000012511	dhx40	98	65.975	Seriola_dumerili
ENSRNOG00000004549	Dhx40	91	66.433	ENSSLDG00000010146	dhx40	98	66.252	Seriola_lalandi_dorsalis
ENSRNOG00000004549	Dhx40	87	97.862	ENSSARG00000009800	DHX40	87	97.862	Sorex_araneus
ENSRNOG00000004549	Dhx40	92	74.548	ENSSPUG00000016309	DHX40	96	74.548	Sphenodon_punctatus
ENSRNOG00000004549	Dhx40	92	65.512	ENSSPAG00000015901	dhx40	99	65.484	Stegastes_partitus
ENSRNOG00000004549	Dhx40	100	98.074	ENSSSCG00000017665	DHX40	100	98.074	Sus_scrofa
ENSRNOG00000004549	Dhx40	94	70.137	ENSTGUG00000007512	DHX40	100	70.137	Taeniopygia_guttata
ENSRNOG00000004549	Dhx40	92	62.778	ENSTRUG00000010369	dhx40	97	62.778	Takifugu_rubripes
ENSRNOG00000004549	Dhx40	92	61.944	ENSTNIG00000004503	dhx40	100	61.944	Tetraodon_nigroviridis
ENSRNOG00000004549	Dhx40	100	96.791	ENSTBEG00000014980	DHX40	100	96.791	Tupaia_belangeri
ENSRNOG00000004549	Dhx40	99	93.170	ENSTTRG00000017203	DHX40	99	93.170	Tursiops_truncatus
ENSRNOG00000004549	Dhx40	100	97.818	ENSUAMG00000009734	DHX40	100	98.235	Ursus_americanus
ENSRNOG00000004549	Dhx40	100	97.561	ENSUMAG00000022721	DHX40	100	97.561	Ursus_maritimus
ENSRNOG00000004549	Dhx40	96	97.995	ENSVPAG00000009355	DHX40	100	97.995	Vicugna_pacos
ENSRNOG00000004549	Dhx40	100	97.818	ENSVVUG00000013502	DHX40	91	97.818	Vulpes_vulpes
ENSRNOG00000004549	Dhx40	92	66.528	ENSXETG00000010939	dhx40	99	66.528	Xenopus_tropicalis
ENSRNOG00000004549	Dhx40	91	65.867	ENSXCOG00000001822	dhx40	96	65.867	Xiphophorus_couchianus
ENSRNOG00000004549	Dhx40	91	66.011	ENSXMAG00000012466	dhx40	98	65.837	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function