EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004776 (Gene tree)
Gene ID: 363450
Gene Symbol: Ftsj1
Alias: LOC363450|RGD1561061
Full Name: FtsJ RNA methyltransferase homolog 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 8059 bases
Position: chrX:14994016-15002074
Accession: 1561061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000006365	FtsJ	PF01728.19	1.1e-69	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000006365	-	1653	XM_006256749	ENSRNOP00000006365	324 (aa)	XP_006227349	D3ZZA1

Gene Model

Click here to download ENSRNOG00000004776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000004776	Ftsj1	60	34.975	ENSRNOG00000043267	Mrm2	83	34.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004776	Ftsj1	99	86.503	ENSG00000068438	FTSJ1	99	86.503	Homo_sapiens
ENSRNOG00000004776	Ftsj1	93	75.163	ENSAPOG00000018541	ftsj1	97	75.163	Acanthochromis_polyacanthus
ENSRNOG00000004776	Ftsj1	99	86.061	ENSAMEG00000012735	FTSJ1	99	86.061	Ailuropoda_melanoleuca
ENSRNOG00000004776	Ftsj1	93	74.834	ENSACIG00000001541	ftsj1	97	74.834	Amphilophus_citrinellus
ENSRNOG00000004776	Ftsj1	93	74.679	ENSAOCG00000009380	ftsj1	98	74.679	Amphiprion_ocellaris
ENSRNOG00000004776	Ftsj1	93	74.359	ENSAPEG00000020434	ftsj1	98	74.359	Amphiprion_percula
ENSRNOG00000004776	Ftsj1	90	74.671	ENSATEG00000008408	ftsj1	95	74.671	Anabas_testudineus
ENSRNOG00000004776	Ftsj1	79	74.525	ENSACAG00000016605	FTSJ1	88	74.525	Anolis_carolinensis
ENSRNOG00000004776	Ftsj1	99	81.098	ENSANAG00000035537	-	94	85.263	Aotus_nancymaae
ENSRNOG00000004776	Ftsj1	99	85.671	ENSANAG00000030571	-	99	85.671	Aotus_nancymaae
ENSRNOG00000004776	Ftsj1	93	73.077	ENSACLG00000014226	ftsj1	98	73.077	Astatotilapia_calliptera
ENSRNOG00000004776	Ftsj1	89	78.425	ENSAMXG00000037663	ftsj1	91	78.425	Astyanax_mexicanus
ENSRNOG00000004776	Ftsj1	100	72.783	ENSBTAG00000046593	-	100	72.783	Bos_taurus
ENSRNOG00000004776	Ftsj1	100	79.027	ENSBTAG00000031829	FTSJ1	100	79.027	Bos_taurus
ENSRNOG00000004776	Ftsj1	88	54.362	WBGene00011281	R74.7	88	54.362	Caenorhabditis_elegans
ENSRNOG00000004776	Ftsj1	99	85.671	ENSCJAG00000002256	FTSJ1	99	85.671	Callithrix_jacchus
ENSRNOG00000004776	Ftsj1	99	86.585	ENSCAFG00000015339	FTSJ1	99	86.585	Canis_familiaris
ENSRNOG00000004776	Ftsj1	99	86.585	ENSCAFG00020021351	FTSJ1	99	86.585	Canis_lupus_dingo
ENSRNOG00000004776	Ftsj1	99	73.538	ENSCHIG00000021392	-	99	73.538	Capra_hircus
ENSRNOG00000004776	Ftsj1	100	73.556	ENSCHIG00000017370	-	100	73.556	Capra_hircus
ENSRNOG00000004776	Ftsj1	100	85.106	ENSCHIG00000000441	-	100	85.106	Capra_hircus
ENSRNOG00000004776	Ftsj1	99	86.585	ENSTSYG00000029207	FTSJ1	99	86.585	Carlito_syrichta
ENSRNOG00000004776	Ftsj1	92	73.000	ENSCAPG00000011705	FTSJ1	97	73.000	Cavia_aperea
ENSRNOG00000004776	Ftsj1	99	85.933	ENSCPOG00000030576	FTSJ1	100	85.933	Cavia_porcellus
ENSRNOG00000004776	Ftsj1	99	85.366	ENSCCAG00000027731	FTSJ1	99	85.366	Cebus_capucinus
ENSRNOG00000004776	Ftsj1	99	85.976	ENSCATG00000013045	FTSJ1	99	85.976	Cercocebus_atys
ENSRNOG00000004776	Ftsj1	99	85.627	ENSCLAG00000011582	FTSJ1	99	85.627	Chinchilla_lanigera
ENSRNOG00000004776	Ftsj1	99	85.976	ENSCSAG00000013278	FTSJ1	99	85.976	Chlorocebus_sabaeus
ENSRNOG00000004776	Ftsj1	95	68.139	ENSCING00000008473	-	98	68.139	Ciona_intestinalis
ENSRNOG00000004776	Ftsj1	89	69.536	ENSCSAVG00000010259	-	96	69.536	Ciona_savignyi
ENSRNOG00000004776	Ftsj1	99	86.503	ENSCANG00000033841	FTSJ1	99	86.503	Colobus_angolensis_palliatus
ENSRNOG00000004776	Ftsj1	99	91.463	ENSCGRG00001023654	Ftsj1	100	91.463	Cricetulus_griseus_chok1gshd
ENSRNOG00000004776	Ftsj1	99	91.743	ENSCGRG00000007253	Ftsj1	99	91.743	Cricetulus_griseus_crigri
ENSRNOG00000004776	Ftsj1	94	61.364	ENSCSEG00000018843	ftsj1	93	61.364	Cynoglossus_semilaevis
ENSRNOG00000004776	Ftsj1	89	73.913	ENSCVAG00000009618	ftsj1	95	73.913	Cyprinodon_variegatus
ENSRNOG00000004776	Ftsj1	90	76.610	ENSDARG00000057089	ftsj1	98	88.889	Danio_rerio
ENSRNOG00000004776	Ftsj1	99	80.303	ENSDNOG00000047923	-	99	80.303	Dasypus_novemcinctus
ENSRNOG00000004776	Ftsj1	94	57.003	ENSDNOG00000044320	-	97	57.003	Dasypus_novemcinctus
ENSRNOG00000004776	Ftsj1	97	84.591	ENSDORG00000000074	Ftsj1	100	84.591	Dipodomys_ordii
ENSRNOG00000004776	Ftsj1	88	51.361	FBgn0038861	CG7009	89	51.361	Drosophila_melanogaster
ENSRNOG00000004776	Ftsj1	74	58.566	FBgn0038471	CG5220	83	58.566	Drosophila_melanogaster
ENSRNOG00000004776	Ftsj1	67	75.576	ENSETEG00000014092	-	65	75.576	Echinops_telfairi
ENSRNOG00000004776	Ftsj1	94	60.656	ENSETEG00000018343	-	96	60.656	Echinops_telfairi
ENSRNOG00000004776	Ftsj1	69	72.124	ENSEBUG00000005843	ftsj1	71	72.124	Eptatretus_burgeri
ENSRNOG00000004776	Ftsj1	60	81.500	ENSEASG00005008272	FTSJ1	70	81.500	Equus_asinus_asinus
ENSRNOG00000004776	Ftsj1	99	85.366	ENSECAG00000019260	FTSJ1	99	85.366	Equus_caballus
ENSRNOG00000004776	Ftsj1	90	87.372	ENSEEUG00000001469	FTSJ1	100	87.372	Erinaceus_europaeus
ENSRNOG00000004776	Ftsj1	90	77.333	ENSELUG00000011483	ftsj1	90	77.333	Esox_lucius
ENSRNOG00000004776	Ftsj1	99	85.671	ENSFCAG00000026453	FTSJ1	99	85.671	Felis_catus
ENSRNOG00000004776	Ftsj1	99	84.663	ENSFDAG00000011250	FTSJ1	100	84.663	Fukomys_damarensis
ENSRNOG00000004776	Ftsj1	90	75.497	ENSFHEG00000008464	ftsj1	94	75.497	Fundulus_heteroclitus
ENSRNOG00000004776	Ftsj1	89	76.351	ENSGMOG00000004562	ftsj1	99	76.351	Gadus_morhua
ENSRNOG00000004776	Ftsj1	65	75.701	ENSGAFG00000002036	ftsj1	94	75.701	Gambusia_affinis
ENSRNOG00000004776	Ftsj1	92	74.026	ENSGACG00000008843	ftsj1	95	74.026	Gasterosteus_aculeatus
ENSRNOG00000004776	Ftsj1	99	85.671	ENSGGOG00000028552	FTSJ1	99	85.671	Gorilla_gorilla
ENSRNOG00000004776	Ftsj1	93	73.077	ENSHBUG00000015883	ftsj1	98	73.077	Haplochromis_burtoni
ENSRNOG00000004776	Ftsj1	99	85.846	ENSHGLG00000003132	FTSJ1	100	85.846	Heterocephalus_glaber_female
ENSRNOG00000004776	Ftsj1	99	85.846	ENSHGLG00100014682	FTSJ1	100	85.846	Heterocephalus_glaber_male
ENSRNOG00000004776	Ftsj1	90	76.254	ENSHCOG00000010145	ftsj1	95	76.254	Hippocampus_comes
ENSRNOG00000004776	Ftsj1	90	77.627	ENSIPUG00000005052	FTSJ1	92	77.627	Ictalurus_punctatus
ENSRNOG00000004776	Ftsj1	100	86.930	ENSSTOG00000027717	FTSJ1	100	86.930	Ictidomys_tridecemlineatus
ENSRNOG00000004776	Ftsj1	99	86.018	ENSJJAG00000014517	-	100	86.018	Jaculus_jaculus
ENSRNOG00000004776	Ftsj1	94	84.416	ENSJJAG00000011596	-	97	84.416	Jaculus_jaculus
ENSRNOG00000004776	Ftsj1	89	76.792	ENSKMAG00000000645	ftsj1	92	76.792	Kryptolebias_marmoratus
ENSRNOG00000004776	Ftsj1	94	72.188	ENSLBEG00000005293	ftsj1	89	72.188	Labrus_bergylta
ENSRNOG00000004776	Ftsj1	77	83.333	ENSLACG00000009913	FTSJ1	81	83.333	Latimeria_chalumnae
ENSRNOG00000004776	Ftsj1	89	78.157	ENSLOCG00000015688	ftsj1	87	78.157	Lepisosteus_oculatus
ENSRNOG00000004776	Ftsj1	99	81.957	ENSLAFG00000032618	FTSJ1	100	81.957	Loxodonta_africana
ENSRNOG00000004776	Ftsj1	99	85.976	ENSMFAG00000003467	FTSJ1	99	85.976	Macaca_fascicularis
ENSRNOG00000004776	Ftsj1	99	85.976	ENSMMUG00000018894	FTSJ1	99	85.976	Macaca_mulatta
ENSRNOG00000004776	Ftsj1	99	85.976	ENSMNEG00000044348	FTSJ1	99	85.976	Macaca_nemestrina
ENSRNOG00000004776	Ftsj1	99	86.503	ENSMLEG00000016789	FTSJ1	99	86.503	Mandrillus_leucophaeus
ENSRNOG00000004776	Ftsj1	90	76.412	ENSMAMG00000022841	ftsj1	91	76.412	Mastacembelus_armatus
ENSRNOG00000004776	Ftsj1	93	73.077	ENSMZEG00005022583	ftsj1	98	73.077	Maylandia_zebra
ENSRNOG00000004776	Ftsj1	99	90.244	ENSMAUG00000015442	Ftsj1	100	90.244	Mesocricetus_auratus
ENSRNOG00000004776	Ftsj1	89	91.003	ENSMICG00000036228	-	98	91.003	Microcebus_murinus
ENSRNOG00000004776	Ftsj1	97	88.328	ENSMOCG00000021218	-	96	88.328	Microtus_ochrogaster
ENSRNOG00000004776	Ftsj1	67	96.789	ENSMOCG00000000507	-	100	96.789	Microtus_ochrogaster
ENSRNOG00000004776	Ftsj1	93	90.099	ENSMOCG00000020523	-	96	90.099	Microtus_ochrogaster
ENSRNOG00000004776	Ftsj1	90	72.575	ENSMMOG00000018969	ftsj1	94	72.241	Mola_mola
ENSRNOG00000004776	Ftsj1	90	80.339	ENSMODG00000011356	FTSJ1	100	80.339	Monodelphis_domestica
ENSRNOG00000004776	Ftsj1	90	75.083	ENSMALG00000014209	ftsj1	97	74.426	Monopterus_albus
ENSRNOG00000004776	Ftsj1	99	95.963	MGP_CAROLIEiJ_G0032918	Ftsj1	100	95.963	Mus_caroli
ENSRNOG00000004776	Ftsj1	99	95.652	ENSMUSG00000031171	Ftsj1	100	95.652	Mus_musculus
ENSRNOG00000004776	Ftsj1	99	95.356	MGP_PahariEiJ_G0031467	Ftsj1	100	94.753	Mus_pahari
ENSRNOG00000004776	Ftsj1	99	95.342	MGP_SPRETEiJ_G0034067	Ftsj1	100	95.342	Mus_spretus
ENSRNOG00000004776	Ftsj1	99	86.280	ENSMPUG00000013493	FTSJ1	99	86.280	Mustela_putorius_furo
ENSRNOG00000004776	Ftsj1	100	82.831	ENSMLUG00000003977	FTSJ1	100	82.831	Myotis_lucifugus
ENSRNOG00000004776	Ftsj1	99	88.110	ENSNGAG00000018629	-	100	88.110	Nannospalax_galili
ENSRNOG00000004776	Ftsj1	99	84.146	ENSNGAG00000016847	-	99	84.146	Nannospalax_galili
ENSRNOG00000004776	Ftsj1	93	66.570	ENSNBRG00000012481	ftsj1	98	66.570	Neolamprologus_brichardi
ENSRNOG00000004776	Ftsj1	99	80.793	ENSNLEG00000007816	FTSJ1	99	80.793	Nomascus_leucogenys
ENSRNOG00000004776	Ftsj1	99	85.366	ENSODEG00000009855	FTSJ1	100	85.366	Octodon_degus
ENSRNOG00000004776	Ftsj1	93	72.930	ENSONIG00000003966	ftsj1	100	72.930	Oreochromis_niloticus
ENSRNOG00000004776	Ftsj1	88	43.509	ENSOANG00000013572	-	98	43.509	Ornithorhynchus_anatinus
ENSRNOG00000004776	Ftsj1	99	89.024	ENSOCUG00000008009	-	99	89.024	Oryctolagus_cuniculus
ENSRNOG00000004776	Ftsj1	99	82.972	ENSOCUG00000024620	-	99	82.972	Oryctolagus_cuniculus
ENSRNOG00000004776	Ftsj1	99	84.211	ENSOCUG00000023277	-	99	84.211	Oryctolagus_cuniculus
ENSRNOG00000004776	Ftsj1	89	75.342	ENSORLG00000028355	ftsj1	94	75.342	Oryzias_latipes
ENSRNOG00000004776	Ftsj1	89	75.342	ENSORLG00020007897	ftsj1	94	75.342	Oryzias_latipes_hni
ENSRNOG00000004776	Ftsj1	89	75.342	ENSOMEG00000018497	ftsj1	86	75.342	Oryzias_melastigma
ENSRNOG00000004776	Ftsj1	98	85.802	ENSOGAG00000032641	-	100	85.802	Otolemur_garnettii
ENSRNOG00000004776	Ftsj1	99	76.133	ENSOGAG00000016174	-	99	76.133	Otolemur_garnettii
ENSRNOG00000004776	Ftsj1	100	85.106	ENSOARG00000012432	-	100	85.106	Ovis_aries
ENSRNOG00000004776	Ftsj1	99	71.560	ENSOARG00000012099	-	99	71.560	Ovis_aries
ENSRNOG00000004776	Ftsj1	99	86.503	ENSPPAG00000028540	FTSJ1	99	86.503	Pan_paniscus
ENSRNOG00000004776	Ftsj1	99	85.671	ENSPPRG00000000249	FTSJ1	99	85.671	Panthera_pardus
ENSRNOG00000004776	Ftsj1	99	85.366	ENSPTIG00000017680	FTSJ1	99	85.366	Panthera_tigris_altaica
ENSRNOG00000004776	Ftsj1	99	86.503	ENSPTRG00000049433	FTSJ1	99	86.503	Pan_troglodytes
ENSRNOG00000004776	Ftsj1	99	85.976	ENSPANG00000010102	FTSJ1	99	85.976	Papio_anubis
ENSRNOG00000004776	Ftsj1	90	75.329	ENSPKIG00000019318	ftsj1	89	75.329	Paramormyrops_kingsleyae
ENSRNOG00000004776	Ftsj1	85	55.319	ENSPSIG00000007020	FTSJ1	93	56.439	Pelodiscus_sinensis
ENSRNOG00000004776	Ftsj1	100	80.428	ENSPEMG00000013262	-	98	80.428	Peromyscus_maniculatus_bairdii
ENSRNOG00000004776	Ftsj1	99	89.877	ENSPEMG00000015698	-	100	89.877	Peromyscus_maniculatus_bairdii
ENSRNOG00000004776	Ftsj1	90	73.311	ENSPMAG00000006943	FTSJ1	99	73.311	Petromyzon_marinus
ENSRNOG00000004776	Ftsj1	94	75.728	ENSPCIG00000007236	FTSJ1	98	75.728	Phascolarctos_cinereus
ENSRNOG00000004776	Ftsj1	90	74.576	ENSPFOG00000017003	ftsj1	95	74.576	Poecilia_formosa
ENSRNOG00000004776	Ftsj1	78	77.647	ENSPLAG00000016190	ftsj1	91	77.647	Poecilia_latipinna
ENSRNOG00000004776	Ftsj1	89	74.828	ENSPMEG00000021719	ftsj1	92	74.828	Poecilia_mexicana
ENSRNOG00000004776	Ftsj1	90	74.744	ENSPREG00000016616	ftsj1	95	74.744	Poecilia_reticulata
ENSRNOG00000004776	Ftsj1	67	73.248	ENSPPYG00000020309	-	99	73.248	Pongo_abelii
ENSRNOG00000004776	Ftsj1	57	89.873	ENSPCAG00000009437	-	65	89.873	Procavia_capensis
ENSRNOG00000004776	Ftsj1	89	91.034	ENSPCOG00000022716	-	93	91.034	Propithecus_coquereli
ENSRNOG00000004776	Ftsj1	99	85.890	ENSPCOG00000018822	-	99	85.890	Propithecus_coquereli
ENSRNOG00000004776	Ftsj1	69	75.000	ENSPVAG00000015621	FTSJ1	69	75.000	Pteropus_vampyrus
ENSRNOG00000004776	Ftsj1	93	73.077	ENSPNYG00000011144	ftsj1	98	73.077	Pundamilia_nyererei
ENSRNOG00000004776	Ftsj1	90	77.627	ENSPNAG00000016330	ftsj1	92	77.627	Pygocentrus_nattereri
ENSRNOG00000004776	Ftsj1	99	85.976	ENSRBIG00000027511	FTSJ1	99	85.976	Rhinopithecus_bieti
ENSRNOG00000004776	Ftsj1	99	85.976	ENSRROG00000029757	FTSJ1	99	85.976	Rhinopithecus_roxellana
ENSRNOG00000004776	Ftsj1	88	48.553	YBR061C	TRM7	99	48.553	Saccharomyces_cerevisiae
ENSRNOG00000004776	Ftsj1	99	86.196	ENSSBOG00000028146	FTSJ1	99	86.196	Saimiri_boliviensis_boliviensis
ENSRNOG00000004776	Ftsj1	88	79.038	ENSSHAG00000012607	FTSJ1	94	79.038	Sarcophilus_harrisii
ENSRNOG00000004776	Ftsj1	90	75.748	ENSSFOG00015006275	ftsj1	88	75.748	Scleropages_formosus
ENSRNOG00000004776	Ftsj1	90	76.254	ENSSMAG00000001754	ftsj1	95	76.254	Scophthalmus_maximus
ENSRNOG00000004776	Ftsj1	90	75.932	ENSSDUG00000015226	ftsj1	95	75.932	Seriola_dumerili
ENSRNOG00000004776	Ftsj1	90	76.689	ENSSLDG00000019859	ftsj1	95	76.689	Seriola_lalandi_dorsalis
ENSRNOG00000004776	Ftsj1	75	78.601	ENSSARG00000007246	-	97	78.189	Sorex_araneus
ENSRNOG00000004776	Ftsj1	99	83.129	ENSSARG00000007091	-	99	83.129	Sorex_araneus
ENSRNOG00000004776	Ftsj1	90	75.410	ENSSPAG00000022047	ftsj1	100	72.897	Stegastes_partitus
ENSRNOG00000004776	Ftsj1	99	85.671	ENSSSCG00000025599	FTSJ1	99	85.671	Sus_scrofa
ENSRNOG00000004776	Ftsj1	90	76.271	ENSTRUG00000016142	ftsj1	96	74.342	Takifugu_rubripes
ENSRNOG00000004776	Ftsj1	90	74.237	ENSTNIG00000010402	ftsj1	98	72.368	Tetraodon_nigroviridis
ENSRNOG00000004776	Ftsj1	99	84.146	ENSTTRG00000009027	FTSJ1	99	84.146	Tursiops_truncatus
ENSRNOG00000004776	Ftsj1	97	86.562	ENSUAMG00000013296	FTSJ1	95	86.562	Ursus_americanus
ENSRNOG00000004776	Ftsj1	99	78.571	ENSUMAG00000007966	FTSJ1	99	79.268	Ursus_maritimus
ENSRNOG00000004776	Ftsj1	53	78.409	ENSVPAG00000008296	-	99	78.409	Vicugna_pacos
ENSRNOG00000004776	Ftsj1	99	86.585	ENSVVUG00000017640	FTSJ1	99	86.585	Vulpes_vulpes
ENSRNOG00000004776	Ftsj1	90	71.429	ENSXCOG00000003344	ftsj1	90	71.429	Xiphophorus_couchianus
ENSRNOG00000004776	Ftsj1	90	75.085	ENSXMAG00000009372	ftsj1	96	75.085	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002128	tRNA nucleoside ribose methylation	-	IEA	Process
GO:0002181	cytoplasmic translation	21873635.	IBA	Process
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0009020	tRNA (guanosine-2'-O-)-methyltransferase activity	-	ISO	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0052666	tRNA (cytosine-2'-O-)-methyltransferase activity	-	ISO	Function