EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004777 (Gene tree)
Gene ID: 366203
Gene Symbol: Esf1
Alias: LOC366203|RGD1306067
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 53762 bases
Position: chr3:133178561-133232322
Accession: 1306067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000037915	NUC153	PF08159.12	1.7e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000034487	-	3549	XM_006235105	ENSRNOP00000037915	842 (aa)	XP_006235167	Q76MT4

Gene Model

Click here to download ENSRNOG00000004777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004777	Esf1	100	79.883	ENSG00000089048	ESF1	98	85.111	Homo_sapiens
ENSRNOG00000004777	Esf1	59	55.916	ENSAPOG00000003004	esf1	99	56.298	Acanthochromis_polyacanthus
ENSRNOG00000004777	Esf1	100	76.395	ENSAMEG00000008830	ESF1	100	76.019	Ailuropoda_melanoleuca
ENSRNOG00000004777	Esf1	76	70.667	ENSACIG00000018305	esf1	90	70.833	Amphilophus_citrinellus
ENSRNOG00000004777	Esf1	79	74.026	ENSAOCG00000006033	esf1	88	73.611	Amphiprion_ocellaris
ENSRNOG00000004777	Esf1	79	74.026	ENSAPEG00000022385	esf1	88	73.611	Amphiprion_percula
ENSRNOG00000004777	Esf1	76	72.973	ENSATEG00000016321	esf1	85	73.611	Anabas_testudineus
ENSRNOG00000004777	Esf1	100	60.347	ENSAPLG00000012113	ESF1	66	73.381	Anas_platyrhynchos
ENSRNOG00000004777	Esf1	100	62.009	ENSACAG00000000963	ESF1	66	74.552	Anolis_carolinensis
ENSRNOG00000004777	Esf1	100	78.480	ENSANAG00000036778	ESF1	100	77.661	Aotus_nancymaae
ENSRNOG00000004777	Esf1	79	70.130	ENSACLG00000002972	esf1	88	69.444	Astatotilapia_calliptera
ENSRNOG00000004777	Esf1	75	65.256	ENSAMXG00000001172	esf1	89	65.278	Astyanax_mexicanus
ENSRNOG00000004777	Esf1	100	78.089	ENSBTAG00000007130	ESF1	100	77.855	Bos_taurus
ENSRNOG00000004777	Esf1	100	77.778	ENSCJAG00000004640	ESF1	100	77.544	Callithrix_jacchus
ENSRNOG00000004777	Esf1	100	77.013	ENSCAFG00000005587	ESF1	100	76.546	Canis_familiaris
ENSRNOG00000004777	Esf1	100	77.013	ENSCAFG00020027530	ESF1	100	76.546	Canis_lupus_dingo
ENSRNOG00000004777	Esf1	100	79.059	ENSCHIG00000021188	ESF1	100	78.862	Capra_hircus
ENSRNOG00000004777	Esf1	100	79.508	ENSTSYG00000009956	ESF1	100	78.571	Carlito_syrichta
ENSRNOG00000004777	Esf1	100	68.171	ENSCAPG00000010466	-	100	67.340	Cavia_aperea
ENSRNOG00000004777	Esf1	80	81.452	ENSCAPG00000010333	-	89	95.833	Cavia_aperea
ENSRNOG00000004777	Esf1	100	79.103	ENSCPOG00000014027	-	100	78.276	Cavia_porcellus
ENSRNOG00000004777	Esf1	100	77.895	ENSCCAG00000024521	ESF1	100	77.895	Cebus_capucinus
ENSRNOG00000004777	Esf1	100	80.234	ENSCATG00000042792	ESF1	100	80.117	Cercocebus_atys
ENSRNOG00000004777	Esf1	100	80.165	ENSCLAG00000013266	-	100	79.457	Chinchilla_lanigera
ENSRNOG00000004777	Esf1	100	79.532	ENSCSAG00000011777	ESF1	100	78.830	Chlorocebus_sabaeus
ENSRNOG00000004777	Esf1	58	43.500	ENSCING00000020446	-	89	50.794	Ciona_intestinalis
ENSRNOG00000004777	Esf1	67	50.000	ENSCSAVG00000009015	-	87	49.206	Ciona_savignyi
ENSRNOG00000004777	Esf1	100	80.000	ENSCANG00000030674	ESF1	100	79.181	Colobus_angolensis_palliatus
ENSRNOG00000004777	Esf1	100	84.935	ENSCGRG00001018257	Esf1	100	85.528	Cricetulus_griseus_chok1gshd
ENSRNOG00000004777	Esf1	73	63.077	ENSCSEG00000001159	esf1	85	63.492	Cynoglossus_semilaevis
ENSRNOG00000004777	Esf1	73	74.242	ENSCVAG00000007894	esf1	91	68.056	Cyprinodon_variegatus
ENSRNOG00000004777	Esf1	74	67.568	ENSDARG00000008740	esf1	86	68.056	Danio_rerio
ENSRNOG00000004777	Esf1	100	76.257	ENSDNOG00000019409	ESF1	100	74.854	Dasypus_novemcinctus
ENSRNOG00000004777	Esf1	100	81.206	ENSDORG00000016313	Esf1	100	80.260	Dipodomys_ordii
ENSRNOG00000004777	Esf1	84	38.080	FBgn0024364	CG11417	80	54.286	Drosophila_melanogaster
ENSRNOG00000004777	Esf1	80	80.128	ENSETEG00000004471	ESF1	78	80.128	Echinops_telfairi
ENSRNOG00000004777	Esf1	66	49.076	ENSEBUG00000015161	esf1	87	50.000	Eptatretus_burgeri
ENSRNOG00000004777	Esf1	100	79.181	ENSEASG00005001777	ESF1	100	77.778	Equus_asinus_asinus
ENSRNOG00000004777	Esf1	100	79.064	ENSECAG00000019188	ESF1	100	77.895	Equus_caballus
ENSRNOG00000004777	Esf1	74	57.717	ENSEEUG00000015837	-	87	59.494	Erinaceus_europaeus
ENSRNOG00000004777	Esf1	74	67.949	ENSELUG00000000408	esf1	82	68.056	Esox_lucius
ENSRNOG00000004777	Esf1	100	77.156	ENSFCAG00000000919	ESF1	100	77.506	Felis_catus
ENSRNOG00000004777	Esf1	65	73.646	ENSFALG00000010914	ESF1	65	73.514	Ficedula_albicollis
ENSRNOG00000004777	Esf1	100	79.314	ENSFDAG00000014777	ESF1	100	78.014	Fukomys_damarensis
ENSRNOG00000004777	Esf1	59	60.792	ENSFHEG00000014984	esf1	99	61.341	Fundulus_heteroclitus
ENSRNOG00000004777	Esf1	100	61.313	ENSGALG00000034768	ESF1	100	59.770	Gallus_gallus
ENSRNOG00000004777	Esf1	75	67.568	ENSGAFG00000000540	esf1	90	68.056	Gambusia_affinis
ENSRNOG00000004777	Esf1	100	79.649	ENSGGOG00000006692	ESF1	100	79.064	Gorilla_gorilla
ENSRNOG00000004777	Esf1	80	71.429	ENSHBUG00000001890	esf1	88	70.833	Haplochromis_burtoni
ENSRNOG00000004777	Esf1	100	79.339	ENSHGLG00000011505	ESF1	100	78.512	Heterocephalus_glaber_female
ENSRNOG00000004777	Esf1	100	79.339	ENSHGLG00100015045	ESF1	100	78.512	Heterocephalus_glaber_male
ENSRNOG00000004777	Esf1	75	67.949	ENSIPUG00000006507	esf1	85	68.056	Ictalurus_punctatus
ENSRNOG00000004777	Esf1	100	79.905	ENSSTOG00000009846	ESF1	100	78.723	Ictidomys_tridecemlineatus
ENSRNOG00000004777	Esf1	100	80.213	ENSJJAG00000012570	Esf1	100	79.976	Jaculus_jaculus
ENSRNOG00000004777	Esf1	65	67.372	ENSLACG00000016439	ESF1	66	67.782	Latimeria_chalumnae
ENSRNOG00000004777	Esf1	75	66.667	ENSLOCG00000015979	esf1	82	68.056	Lepisosteus_oculatus
ENSRNOG00000004777	Esf1	100	76.851	ENSLAFG00000005479	ESF1	100	76.263	Loxodonta_africana
ENSRNOG00000004777	Esf1	100	80.117	ENSMFAG00000036841	ESF1	100	80.000	Macaca_fascicularis
ENSRNOG00000004777	Esf1	100	80.234	ENSMNEG00000044042	ESF1	100	80.117	Macaca_nemestrina
ENSRNOG00000004777	Esf1	100	80.000	ENSMLEG00000037121	ESF1	100	79.883	Mandrillus_leucophaeus
ENSRNOG00000004777	Esf1	75	72.973	ENSMAMG00000018648	esf1	88	73.611	Mastacembelus_armatus
ENSRNOG00000004777	Esf1	59	60.835	ENSMZEG00005013912	esf1	99	60.636	Maylandia_zebra
ENSRNOG00000004777	Esf1	100	61.059	ENSMGAG00000004291	ESF1	66	73.105	Meleagris_gallopavo
ENSRNOG00000004777	Esf1	100	85.343	ENSMAUG00000015975	Esf1	100	85.343	Mesocricetus_auratus
ENSRNOG00000004777	Esf1	100	81.659	ENSMICG00000010711	ESF1	100	81.308	Microcebus_murinus
ENSRNOG00000004777	Esf1	100	84.360	ENSMOCG00000005902	Esf1	100	83.688	Microtus_ochrogaster
ENSRNOG00000004777	Esf1	59	59.423	ENSMMOG00000018693	esf1	99	60.192	Mola_mola
ENSRNOG00000004777	Esf1	100	67.333	ENSMODG00000005066	ESF1	100	67.098	Monodelphis_domestica
ENSRNOG00000004777	Esf1	69	68.919	ENSMALG00000007338	esf1	81	69.444	Monopterus_albus
ENSRNOG00000004777	Esf1	100	90.802	MGP_CAROLIEiJ_G0024365	Esf1	100	90.684	Mus_caroli
ENSRNOG00000004777	Esf1	100	89.623	ENSMUSG00000045624	Esf1	100	90.566	Mus_musculus
ENSRNOG00000004777	Esf1	100	90.555	MGP_PahariEiJ_G0025810	Esf1	100	90.083	Mus_pahari
ENSRNOG00000004777	Esf1	92	97.945	MGP_SPRETEiJ_G0025285	Esf1	98	97.987	Mus_spretus
ENSRNOG00000004777	Esf1	100	78.763	ENSMPUG00000001450	ESF1	100	77.830	Mustela_putorius_furo
ENSRNOG00000004777	Esf1	100	76.196	ENSMLUG00000013080	ESF1	100	76.663	Myotis_lucifugus
ENSRNOG00000004777	Esf1	100	77.661	ENSNLEG00000014563	ESF1	100	76.257	Nomascus_leucogenys
ENSRNOG00000004777	Esf1	60	80.990	ENSOPRG00000004862	ESF1	100	80.990	Ochotona_princeps
ENSRNOG00000004777	Esf1	100	79.363	ENSODEG00000006824	ESF1	100	78.656	Octodon_degus
ENSRNOG00000004777	Esf1	78	71.429	ENSONIG00000006804	esf1	87	70.833	Oreochromis_niloticus
ENSRNOG00000004777	Esf1	100	67.633	ENSOANG00000008432	-	100	67.783	Ornithorhynchus_anatinus
ENSRNOG00000004777	Esf1	100	77.220	ENSOCUG00000005414	ESF1	100	76.752	Oryctolagus_cuniculus
ENSRNOG00000004777	Esf1	59	55.534	ENSORLG00000018625	esf1	99	53.905	Oryzias_latipes
ENSRNOG00000004777	Esf1	75	70.513	ENSORLG00015022826	esf1	91	69.444	Oryzias_latipes_hsok
ENSRNOG00000004777	Esf1	59	53.524	ENSOMEG00000009311	esf1	99	54.493	Oryzias_melastigma
ENSRNOG00000004777	Esf1	100	77.332	ENSOGAG00000016912	ESF1	100	76.950	Otolemur_garnettii
ENSRNOG00000004777	Esf1	100	76.932	ENSOARG00000011158	ESF1	63	88.108	Ovis_aries
ENSRNOG00000004777	Esf1	100	79.064	ENSPPAG00000024379	ESF1	100	77.895	Pan_paniscus
ENSRNOG00000004777	Esf1	100	77.804	ENSPPRG00000012007	ESF1	100	77.453	Panthera_pardus
ENSRNOG00000004777	Esf1	100	77.804	ENSPTIG00000020063	ESF1	100	77.220	Panthera_tigris_altaica
ENSRNOG00000004777	Esf1	100	79.064	ENSPTRG00000013258	ESF1	100	78.713	Pan_troglodytes
ENSRNOG00000004777	Esf1	76	63.736	ENSPKIG00000024448	esf1	78	70.833	Paramormyrops_kingsleyae
ENSRNOG00000004777	Esf1	81	64.935	ENSPMGG00000016911	esf1	72	52.289	Periophthalmus_magnuspinnatus
ENSRNOG00000004777	Esf1	100	67.055	ENSPCIG00000019331	ESF1	100	61.785	Phascolarctos_cinereus
ENSRNOG00000004777	Esf1	76	63.514	ENSPFOG00000010101	esf1	88	65.278	Poecilia_formosa
ENSRNOG00000004777	Esf1	59	56.977	ENSPLAG00000006452	esf1	99	56.783	Poecilia_latipinna
ENSRNOG00000004777	Esf1	76	64.865	ENSPMEG00000000713	esf1	89	65.278	Poecilia_mexicana
ENSRNOG00000004777	Esf1	78	66.216	ENSPREG00000004431	esf1	93	66.667	Poecilia_reticulata
ENSRNOG00000004777	Esf1	100	78.947	ENSPPYG00000010715	ESF1	100	78.713	Pongo_abelii
ENSRNOG00000004777	Esf1	100	71.747	ENSPCAG00000006881	ESF1	100	70.692	Procavia_capensis
ENSRNOG00000004777	Esf1	83	91.667	ENSPVAG00000001295	ESF1	83	91.667	Pteropus_vampyrus
ENSRNOG00000004777	Esf1	80	68.831	ENSPNYG00000015735	esf1	88	69.444	Pundamilia_nyererei
ENSRNOG00000004777	Esf1	74	64.865	ENSPNAG00000014721	esf1	84	65.278	Pygocentrus_nattereri
ENSRNOG00000004777	Esf1	100	79.181	ENSRBIG00000035763	ESF1	100	79.298	Rhinopithecus_bieti
ENSRNOG00000004777	Esf1	100	80.000	ENSRROG00000032022	ESF1	100	79.532	Rhinopithecus_roxellana
ENSRNOG00000004777	Esf1	55	33.202	YDR365C	-	73	33.789	Saccharomyces_cerevisiae
ENSRNOG00000004777	Esf1	100	78.154	ENSSBOG00000030387	ESF1	100	77.103	Saimiri_boliviensis_boliviensis
ENSRNOG00000004777	Esf1	100	68.787	ENSSHAG00000000449	ESF1	100	68.787	Sarcophilus_harrisii
ENSRNOG00000004777	Esf1	75	70.270	ENSSDUG00000019460	esf1	92	70.833	Seriola_dumerili
ENSRNOG00000004777	Esf1	100	58.159	ENSSPUG00000012635	ESF1	70	73.968	Sphenodon_punctatus
ENSRNOG00000004777	Esf1	76	72.727	ENSSPAG00000019077	esf1	87	72.222	Stegastes_partitus
ENSRNOG00000004777	Esf1	100	77.236	ENSSSCG00000007077	ESF1	100	78.165	Sus_scrofa
ENSRNOG00000004777	Esf1	69	70.034	ENSTGUG00000002450	ESF1	64	73.250	Taeniopygia_guttata
ENSRNOG00000004777	Esf1	76	70.588	ENSTRUG00000009445	esf1	86	71.429	Takifugu_rubripes
ENSRNOG00000004777	Esf1	72	86.447	ENSTBEG00000008552	ESF1	76	86.447	Tupaia_belangeri
ENSRNOG00000004777	Esf1	100	77.778	ENSTTRG00000005335	ESF1	100	77.661	Tursiops_truncatus
ENSRNOG00000004777	Esf1	100	77.246	ENSUMAG00000008579	ESF1	100	77.363	Ursus_maritimus
ENSRNOG00000004777	Esf1	92	83.951	ENSVPAG00000005291	ESF1	92	83.951	Vicugna_pacos
ENSRNOG00000004777	Esf1	100	76.079	ENSVVUG00000014318	ESF1	93	76.196	Vulpes_vulpes
ENSRNOG00000004777	Esf1	76	68.919	ENSXMAG00000017651	esf1	87	69.444	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process