EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004820 (Gene tree)
Gene ID: 287276
Gene Symbol: Sar1b
Alias: LOC287276|SARA1B|Sara2
Full Name: secretion associated%2C Ras related GTPase 1B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 29722 bases
Position: chr10:37215937-37245658
Accession: 1305590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000006567	MMR_HSR1	PF01926.23	5.7e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000006567	-	1264	-	ENSRNOP00000006567	198 (aa)	-	Q5HZY2

Gene Model

Click here to download ENSRNOG00000004820's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04141	Protein processing in endoplasmic reticulum	KEGG
rno05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000004820	Sar1b	100	90.404	ENSRNOG00000000557	Ppa1	100	90.404
ENSRNOG00000004820	Sar1b	77	30.519	ENSRNOG00000055860	Arl8b	78	30.519
ENSRNOG00000004820	Sar1b	69	33.333	ENSRNOG00000060229	Arf1	76	33.333
ENSRNOG00000004820	Sar1b	68	30.370	ENSRNOG00000045948	Arl10	69	30.370
ENSRNOG00000004820	Sar1b	83	35.152	ENSRNOG00000014653	Arl11	88	35.152
ENSRNOG00000004820	Sar1b	64	35.115	ENSRNOG00000004282	Arl4a	66	35.115
ENSRNOG00000004820	Sar1b	61	39.535	ENSRNOG00000020770	Arl4d	64	39.535
ENSRNOG00000004820	Sar1b	86	30.000	ENSRNOG00000013992	Arfrp1	84	30.000
ENSRNOG00000004820	Sar1b	88	32.386	ENSRNOG00000049827	Arl14	86	32.386
ENSRNOG00000004820	Sar1b	91	30.978	ENSRNOG00000001689	Arl6	92	30.978
ENSRNOG00000004820	Sar1b	64	36.220	ENSRNOG00000021010	Arl2	73	36.220
ENSRNOG00000004820	Sar1b	67	32.576	ENSRNOG00000004807	Arf2	73	32.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004820	Sar1b	100	98.990	ENSG00000152700	SAR1B	100	99.029	Homo_sapiens
ENSRNOG00000004820	Sar1b	100	98.990	ENSAMEG00000017849	SAR1B	100	98.990	Ailuropoda_melanoleuca
ENSRNOG00000004820	Sar1b	100	88.945	ENSAPLG00000007369	SAR1A	100	88.945	Anas_platyrhynchos
ENSRNOG00000004820	Sar1b	100	93.939	ENSACAG00000001850	SAR1B	100	93.939	Anolis_carolinensis
ENSRNOG00000004820	Sar1b	100	78.283	ENSANAG00000032734	SAR1B	81	99.138	Aotus_nancymaae
ENSRNOG00000004820	Sar1b	100	98.485	ENSBTAG00000021226	SAR1B	100	98.485	Bos_taurus
ENSRNOG00000004820	Sar1b	100	99.495	ENSCJAG00000004819	SAR1B	100	99.495	Callithrix_jacchus
ENSRNOG00000004820	Sar1b	100	98.990	ENSCAFG00000031992	SAR1B	100	98.990	Canis_familiaris
ENSRNOG00000004820	Sar1b	100	98.990	ENSCAFG00020001469	SAR1B	100	98.990	Canis_lupus_dingo
ENSRNOG00000004820	Sar1b	100	98.485	ENSCHIG00000022509	SAR1B	100	98.485	Capra_hircus
ENSRNOG00000004820	Sar1b	100	98.990	ENSTSYG00000011867	SAR1B	100	98.990	Carlito_syrichta
ENSRNOG00000004820	Sar1b	96	93.299	ENSCAPG00000015216	SAR1B	98	93.299	Cavia_aperea
ENSRNOG00000004820	Sar1b	100	97.980	ENSCPOG00000038655	SAR1B	100	97.980	Cavia_porcellus
ENSRNOG00000004820	Sar1b	100	98.990	ENSCCAG00000037282	SAR1B	100	98.990	Cebus_capucinus
ENSRNOG00000004820	Sar1b	100	99.495	ENSCATG00000022601	SAR1B	100	99.495	Cercocebus_atys
ENSRNOG00000004820	Sar1b	100	98.990	ENSCLAG00000015791	-	100	98.990	Chinchilla_lanigera
ENSRNOG00000004820	Sar1b	100	98.990	ENSCSAG00000013578	SAR1B	100	98.990	Chlorocebus_sabaeus
ENSRNOG00000004820	Sar1b	100	97.475	ENSCPBG00000008203	SAR1B	100	97.475	Chrysemys_picta_bellii
ENSRNOG00000004820	Sar1b	100	99.495	ENSCGRG00001016339	SAR1B	100	99.495	Cricetulus_griseus_chok1gshd
ENSRNOG00000004820	Sar1b	100	99.495	ENSCGRG00000016600	SAR1B	100	99.495	Cricetulus_griseus_crigri
ENSRNOG00000004820	Sar1b	100	98.990	ENSDNOG00000044440	SAR1B	100	98.990	Dasypus_novemcinctus
ENSRNOG00000004820	Sar1b	100	99.495	ENSDORG00000023516	Sar1b	100	99.495	Dipodomys_ordii
ENSRNOG00000004820	Sar1b	100	98.485	ENSETEG00000016178	SAR1B	100	98.485	Echinops_telfairi
ENSRNOG00000004820	Sar1b	100	99.495	ENSEASG00005018603	SAR1B	100	99.495	Equus_asinus_asinus
ENSRNOG00000004820	Sar1b	100	99.495	ENSECAG00000012409	SAR1B	100	99.495	Equus_caballus
ENSRNOG00000004820	Sar1b	100	99.495	ENSFCAG00000000338	SAR1B	100	99.495	Felis_catus
ENSRNOG00000004820	Sar1b	99	95.408	ENSFALG00000007931	SAR1B	99	95.408	Ficedula_albicollis
ENSRNOG00000004820	Sar1b	100	98.990	ENSFDAG00000010710	SAR1B	100	98.990	Fukomys_damarensis
ENSRNOG00000004820	Sar1b	100	96.970	ENSGALG00000038753	SAR1B	100	96.970	Gallus_gallus
ENSRNOG00000004820	Sar1b	100	96.465	ENSGAGG00000022935	SAR1B	100	96.465	Gopherus_agassizii
ENSRNOG00000004820	Sar1b	100	97.980	ENSHGLG00000015553	SAR1B	100	97.980	Heterocephalus_glaber_female
ENSRNOG00000004820	Sar1b	100	97.980	ENSHGLG00100014879	SAR1B	100	97.980	Heterocephalus_glaber_male
ENSRNOG00000004820	Sar1b	100	98.990	ENSSTOG00000011326	-	100	98.990	Ictidomys_tridecemlineatus
ENSRNOG00000004820	Sar1b	100	98.990	ENSJJAG00000000251	Sar1b	100	98.990	Jaculus_jaculus
ENSRNOG00000004820	Sar1b	100	97.475	ENSLAFG00000001021	SAR1B	100	97.475	Loxodonta_africana
ENSRNOG00000004820	Sar1b	100	99.495	ENSMFAG00000002947	SAR1B	100	99.495	Macaca_fascicularis
ENSRNOG00000004820	Sar1b	100	99.495	ENSMMUG00000004417	SAR1B	100	99.495	Macaca_mulatta
ENSRNOG00000004820	Sar1b	100	99.495	ENSMNEG00000045379	SAR1B	100	99.495	Macaca_nemestrina
ENSRNOG00000004820	Sar1b	100	99.495	ENSMLEG00000038596	SAR1B	100	99.495	Mandrillus_leucophaeus
ENSRNOG00000004820	Sar1b	100	97.475	ENSMGAG00000008340	SAR1B	100	97.475	Meleagris_gallopavo
ENSRNOG00000004820	Sar1b	100	99.495	ENSMAUG00000014677	Sar1b	100	99.495	Mesocricetus_auratus
ENSRNOG00000004820	Sar1b	100	96.970	ENSMICG00000011638	SAR1B	100	96.970	Microcebus_murinus
ENSRNOG00000004820	Sar1b	100	98.990	MGP_CAROLIEiJ_G0016318	Sar1b	100	98.990	Mus_caroli
ENSRNOG00000004820	Sar1b	100	98.990	ENSMUSG00000020386	Sar1b	100	98.990	Mus_musculus
ENSRNOG00000004820	Sar1b	100	99.495	MGP_PahariEiJ_G0017453	Sar1b	100	99.495	Mus_pahari
ENSRNOG00000004820	Sar1b	100	98.990	MGP_SPRETEiJ_G0017162	Sar1b	100	98.990	Mus_spretus
ENSRNOG00000004820	Sar1b	100	98.990	ENSMPUG00000010087	SAR1B	100	98.990	Mustela_putorius_furo
ENSRNOG00000004820	Sar1b	100	98.485	ENSMLUG00000016342	SAR1B	100	98.485	Myotis_lucifugus
ENSRNOG00000004820	Sar1b	100	98.990	ENSNGAG00000016176	Sar1b	100	98.990	Nannospalax_galili
ENSRNOG00000004820	Sar1b	100	99.495	ENSNLEG00000008118	SAR1B	100	99.495	Nomascus_leucogenys
ENSRNOG00000004820	Sar1b	100	96.970	ENSODEG00000009764	SAR1B	100	96.970	Octodon_degus
ENSRNOG00000004820	Sar1b	100	98.485	ENSOCUG00000008250	SAR1B	100	98.485	Oryctolagus_cuniculus
ENSRNOG00000004820	Sar1b	90	98.883	ENSOGAG00000013347	SAR1B	100	98.883	Otolemur_garnettii
ENSRNOG00000004820	Sar1b	100	98.485	ENSOARG00000014231	SAR1B	100	98.485	Ovis_aries
ENSRNOG00000004820	Sar1b	100	99.495	ENSPPAG00000033175	SAR1B	100	99.495	Pan_paniscus
ENSRNOG00000004820	Sar1b	100	99.495	ENSPPRG00000008356	SAR1B	100	99.495	Panthera_pardus
ENSRNOG00000004820	Sar1b	100	99.495	ENSPTIG00000001052	SAR1B	100	99.495	Panthera_tigris_altaica
ENSRNOG00000004820	Sar1b	100	99.495	ENSPTRG00000017244	SAR1B	100	99.495	Pan_troglodytes
ENSRNOG00000004820	Sar1b	100	96.517	ENSPANG00000005732	SAR1B	100	96.517	Papio_anubis
ENSRNOG00000004820	Sar1b	100	97.475	ENSPSIG00000004800	SAR1B	100	97.475	Pelodiscus_sinensis
ENSRNOG00000004820	Sar1b	100	99.495	ENSPEMG00000023610	Sar1b	100	99.495	Peromyscus_maniculatus_bairdii
ENSRNOG00000004820	Sar1b	100	97.475	ENSPCIG00000014092	SAR1B	100	97.475	Phascolarctos_cinereus
ENSRNOG00000004820	Sar1b	100	98.990	ENSPPYG00000015789	SAR1B	100	98.990	Pongo_abelii
ENSRNOG00000004820	Sar1b	100	97.475	ENSPCAG00000002624	SAR1B	100	97.475	Procavia_capensis
ENSRNOG00000004820	Sar1b	100	96.970	ENSPCOG00000025721	-	100	96.970	Propithecus_coquereli
ENSRNOG00000004820	Sar1b	100	99.495	ENSPVAG00000012433	SAR1B	100	99.495	Pteropus_vampyrus
ENSRNOG00000004820	Sar1b	100	99.495	ENSRBIG00000036918	SAR1B	100	99.495	Rhinopithecus_bieti
ENSRNOG00000004820	Sar1b	100	99.495	ENSRROG00000028843	SAR1B	100	99.495	Rhinopithecus_roxellana
ENSRNOG00000004820	Sar1b	100	97.475	ENSSHAG00000014991	SAR1B	100	97.475	Sarcophilus_harrisii
ENSRNOG00000004820	Sar1b	100	99.495	ENSSARG00000002144	SAR1B	100	99.495	Sorex_araneus
ENSRNOG00000004820	Sar1b	100	97.980	ENSSPUG00000009441	SAR1B	100	97.980	Sphenodon_punctatus
ENSRNOG00000004820	Sar1b	100	98.990	ENSSSCG00000014305	SAR1B	100	98.990	Sus_scrofa
ENSRNOG00000004820	Sar1b	100	98.990	ENSTTRG00000016864	SAR1B	100	98.990	Tursiops_truncatus
ENSRNOG00000004820	Sar1b	100	98.485	ENSUAMG00000017620	SAR1B	100	98.485	Ursus_americanus
ENSRNOG00000004820	Sar1b	100	98.485	ENSUMAG00000017678	SAR1B	100	98.485	Ursus_maritimus
ENSRNOG00000004820	Sar1b	100	77.273	ENSVPAG00000001588	-	100	77.273	Vicugna_pacos
ENSRNOG00000004820	Sar1b	100	98.990	ENSVVUG00000021294	SAR1B	100	98.990	Vulpes_vulpes
ENSRNOG00000004820	Sar1b	99	85.279	ENSXETG00000010408	sar1b	99	85.279	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003400	regulation of COPII vesicle coating	21873635.	IBA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005789	endoplasmic reticulum membrane	-	IEA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006888	ER to Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0008150	biological_process	-	ND	Process
GO:0016050	vesicle organization	21873635.	IBA	Process
GO:0030127	COPII vesicle coat	21873635.	IBA	Component
GO:0032580	Golgi cisterna membrane	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0061024	membrane organization	21873635.	IBA	Process
GO:0070863	positive regulation of protein exit from endoplasmic reticulum	21873635.	IBA	Process
GO:0070971	endoplasmic reticulum exit site	21873635.	IBA	Component