EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004910 (Gene tree)
Gene ID: 498225
Gene Symbol: Eif2d
Alias: LGTN|LOC498225
Full Name: eukaryotic translation initiation factor 2D
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 18928 bases
Position: chr13:47935163-47954090
Accession: 1561765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000006768	SUI1	PF01253.22	2.4e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000006768	-	2013	XM_006249790	ENSRNOP00000006768	570 (aa)	XP_006249852	Q5PPG7

Gene Model

Click here to download ENSRNOG00000004910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004910	Eif2d	100	81.304	ENSG00000143486	EIF2D	99	88.889	Homo_sapiens
ENSRNOG00000004910	Eif2d	100	57.071	ENSAPOG00000003524	eif2d	99	57.071	Acanthochromis_polyacanthus
ENSRNOG00000004910	Eif2d	100	79.316	ENSAMEG00000011880	EIF2D	99	79.316	Ailuropoda_melanoleuca
ENSRNOG00000004910	Eif2d	88	69.492	ENSACIG00000021785	eif2d	99	69.492	Amphilophus_citrinellus
ENSRNOG00000004910	Eif2d	100	56.370	ENSAOCG00000017584	eif2d	99	57.071	Amphiprion_ocellaris
ENSRNOG00000004910	Eif2d	100	57.118	ENSAPEG00000011347	eif2d	99	57.118	Amphiprion_percula
ENSRNOG00000004910	Eif2d	100	55.369	ENSATEG00000007580	eif2d	99	56.126	Anabas_testudineus
ENSRNOG00000004910	Eif2d	97	59.725	ENSAPLG00000014849	EIF2D	99	59.897	Anas_platyrhynchos
ENSRNOG00000004910	Eif2d	100	58.306	ENSACAG00000007724	EIF2D	99	58.472	Anolis_carolinensis
ENSRNOG00000004910	Eif2d	100	80.789	ENSANAG00000022240	EIF2D	99	88.333	Aotus_nancymaae
ENSRNOG00000004910	Eif2d	100	56.187	ENSACLG00000024604	eif2d	99	56.345	Astatotilapia_calliptera
ENSRNOG00000004910	Eif2d	99	53.051	ENSAMXG00000038035	eif2d	99	53.344	Astyanax_mexicanus
ENSRNOG00000004910	Eif2d	100	80.104	ENSBTAG00000010432	EIF2D	81	80.104	Bos_taurus
ENSRNOG00000004910	Eif2d	100	80.274	ENSCJAG00000018600	EIF2D	99	87.778	Callithrix_jacchus
ENSRNOG00000004910	Eif2d	99	79.130	ENSCAFG00000010261	EIF2D	99	79.245	Canis_familiaris
ENSRNOG00000004910	Eif2d	99	79.304	ENSCAFG00020004757	EIF2D	99	79.417	Canis_lupus_dingo
ENSRNOG00000004910	Eif2d	100	80.243	ENSCHIG00000009380	EIF2D	99	80.243	Capra_hircus
ENSRNOG00000004910	Eif2d	100	82.192	ENSTSYG00000007829	EIF2D	99	86.813	Carlito_syrichta
ENSRNOG00000004910	Eif2d	100	79.021	ENSCPOG00000008935	EIF2D	100	79.021	Cavia_porcellus
ENSRNOG00000004910	Eif2d	100	80.961	ENSCCAG00000026977	EIF2D	99	87.778	Cebus_capucinus
ENSRNOG00000004910	Eif2d	100	80.789	ENSCATG00000030190	EIF2D	99	88.333	Cercocebus_atys
ENSRNOG00000004910	Eif2d	100	80.245	ENSCLAG00000014401	EIF2D	99	80.245	Chinchilla_lanigera
ENSRNOG00000004910	Eif2d	100	81.132	ENSCSAG00000014939	EIF2D	99	81.132	Chlorocebus_sabaeus
ENSRNOG00000004910	Eif2d	92	83.489	ENSCHOG00000007330	EIF2D	90	83.489	Choloepus_hoffmanni
ENSRNOG00000004910	Eif2d	100	62.167	ENSCPBG00000001908	EIF2D	99	62.667	Chrysemys_picta_bellii
ENSRNOG00000004910	Eif2d	100	36.305	ENSCING00000000226	-	99	36.570	Ciona_intestinalis
ENSRNOG00000004910	Eif2d	100	36.921	ENSCSAVG00000005731	-	99	36.921	Ciona_savignyi
ENSRNOG00000004910	Eif2d	100	77.015	ENSCANG00000033926	EIF2D	99	77.015	Colobus_angolensis_palliatus
ENSRNOG00000004910	Eif2d	100	90.385	ENSCGRG00001019105	Eif2d	100	90.385	Cricetulus_griseus_chok1gshd
ENSRNOG00000004910	Eif2d	100	90.385	ENSCGRG00000014164	Eif2d	100	90.385	Cricetulus_griseus_crigri
ENSRNOG00000004910	Eif2d	100	53.925	ENSCSEG00000021328	eif2d	99	54.669	Cynoglossus_semilaevis
ENSRNOG00000004910	Eif2d	100	55.241	ENSCVAG00000016064	eif2d	99	55.241	Cyprinodon_variegatus
ENSRNOG00000004910	Eif2d	100	55.649	ENSDARG00000012929	eif2d	99	55.763	Danio_rerio
ENSRNOG00000004910	Eif2d	100	68.919	ENSDNOG00000009251	-	99	68.919	Dasypus_novemcinctus
ENSRNOG00000004910	Eif2d	100	81.565	ENSDORG00000012925	Eif2d	99	81.565	Dipodomys_ordii
ENSRNOG00000004910	Eif2d	99	33.616	FBgn0041588	eIF2D	99	33.950	Drosophila_melanogaster
ENSRNOG00000004910	Eif2d	100	76.370	ENSETEG00000015298	EIF2D	99	76.370	Echinops_telfairi
ENSRNOG00000004910	Eif2d	100	43.669	ENSEBUG00000011079	eif2d	100	43.760	Eptatretus_burgeri
ENSRNOG00000004910	Eif2d	100	81.424	ENSEASG00005004921	EIF2D	99	81.424	Equus_asinus_asinus
ENSRNOG00000004910	Eif2d	100	79.795	ENSECAG00000000127	EIF2D	80	80.308	Equus_caballus
ENSRNOG00000004910	Eif2d	100	53.884	ENSELUG00000001790	eif2d	99	55.167	Esox_lucius
ENSRNOG00000004910	Eif2d	100	76.239	ENSFCAG00000013786	-	99	80.887	Felis_catus
ENSRNOG00000004910	Eif2d	100	79.268	ENSFDAG00000011373	EIF2D	100	79.268	Fukomys_damarensis
ENSRNOG00000004910	Eif2d	100	55.387	ENSFHEG00000003474	eif2d	99	55.724	Fundulus_heteroclitus
ENSRNOG00000004910	Eif2d	100	53.898	ENSGMOG00000016667	eif2d	100	54.407	Gadus_morhua
ENSRNOG00000004910	Eif2d	100	60.768	ENSGALG00000000856	EIF2D	99	60.768	Gallus_gallus
ENSRNOG00000004910	Eif2d	100	54.882	ENSGAFG00000021062	eif2d	99	54.882	Gambusia_affinis
ENSRNOG00000004910	Eif2d	100	54.591	ENSGACG00000002815	eif2d	100	54.925	Gasterosteus_aculeatus
ENSRNOG00000004910	Eif2d	100	63.500	ENSGAGG00000010058	EIF2D	99	63.500	Gopherus_agassizii
ENSRNOG00000004910	Eif2d	100	81.475	ENSGGOG00000015270	EIF2D	99	88.889	Gorilla_gorilla
ENSRNOG00000004910	Eif2d	100	56.187	ENSHBUG00000006298	eif2d	99	56.345	Haplochromis_burtoni
ENSRNOG00000004910	Eif2d	100	77.759	ENSHGLG00000008498	EIF2D	100	77.759	Heterocephalus_glaber_female
ENSRNOG00000004910	Eif2d	100	78.883	ENSHGLG00100006825	EIF2D	100	78.883	Heterocephalus_glaber_male
ENSRNOG00000004910	Eif2d	100	52.014	ENSHCOG00000009140	eif2d	99	52.014	Hippocampus_comes
ENSRNOG00000004910	Eif2d	100	56.197	ENSIPUG00000012330	eif2d	99	55.952	Ictalurus_punctatus
ENSRNOG00000004910	Eif2d	100	82.759	ENSSTOG00000006329	EIF2D	99	82.759	Ictidomys_tridecemlineatus
ENSRNOG00000004910	Eif2d	100	54.950	ENSKMAG00000016689	eif2d	99	55.537	Kryptolebias_marmoratus
ENSRNOG00000004910	Eif2d	100	54.591	ENSLBEG00000009691	eif2d	99	54.591	Labrus_bergylta
ENSRNOG00000004910	Eif2d	100	58.487	ENSLACG00000008651	EIF2D	99	58.487	Latimeria_chalumnae
ENSRNOG00000004910	Eif2d	100	56.743	ENSLOCG00000012230	eif2d	99	57.641	Lepisosteus_oculatus
ENSRNOG00000004910	Eif2d	100	79.483	ENSLAFG00000000517	EIF2D	99	79.483	Loxodonta_africana
ENSRNOG00000004910	Eif2d	100	81.475	ENSMFAG00000033925	EIF2D	99	88.333	Macaca_fascicularis
ENSRNOG00000004910	Eif2d	100	81.475	ENSMMUG00000002528	EIF2D	99	88.333	Macaca_mulatta
ENSRNOG00000004910	Eif2d	100	81.304	ENSMNEG00000028643	EIF2D	99	87.778	Macaca_nemestrina
ENSRNOG00000004910	Eif2d	100	81.304	ENSMLEG00000030616	EIF2D	99	88.333	Mandrillus_leucophaeus
ENSRNOG00000004910	Eif2d	100	55.041	ENSMAMG00000012055	eif2d	99	55.212	Mastacembelus_armatus
ENSRNOG00000004910	Eif2d	100	56.355	ENSMZEG00005023738	eif2d	99	56.514	Maylandia_zebra
ENSRNOG00000004910	Eif2d	100	59.468	ENSMGAG00000003648	EIF2D	99	59.667	Meleagris_gallopavo
ENSRNOG00000004910	Eif2d	100	88.811	ENSMAUG00000008390	Eif2d	100	88.811	Mesocricetus_auratus
ENSRNOG00000004910	Eif2d	100	80.137	ENSMICG00000017696	EIF2D	99	87.778	Microcebus_murinus
ENSRNOG00000004910	Eif2d	100	89.510	ENSMOCG00000015872	Eif2d	100	89.510	Microtus_ochrogaster
ENSRNOG00000004910	Eif2d	100	54.975	ENSMMOG00000020867	eif2d	99	55.272	Mola_mola
ENSRNOG00000004910	Eif2d	87	67.976	ENSMODG00000002070	EIF2D	99	67.976	Monodelphis_domestica
ENSRNOG00000004910	Eif2d	100	55.207	ENSMALG00000020271	eif2d	99	55.150	Monopterus_albus
ENSRNOG00000004910	Eif2d	100	93.333	MGP_CAROLIEiJ_G0014568	Eif2d	100	93.333	Mus_caroli
ENSRNOG00000004910	Eif2d	100	93.158	ENSMUSG00000026427	Eif2d	100	93.158	Mus_musculus
ENSRNOG00000004910	Eif2d	100	93.684	MGP_PahariEiJ_G0027802	Eif2d	100	93.684	Mus_pahari
ENSRNOG00000004910	Eif2d	100	93.333	MGP_SPRETEiJ_G0015372	Eif2d	100	93.333	Mus_spretus
ENSRNOG00000004910	Eif2d	100	78.120	ENSMPUG00000012089	EIF2D	99	78.120	Mustela_putorius_furo
ENSRNOG00000004910	Eif2d	100	78.425	ENSMLUG00000013479	-	99	78.425	Myotis_lucifugus
ENSRNOG00000004910	Eif2d	100	79.795	ENSMLUG00000001410	-	99	79.795	Myotis_lucifugus
ENSRNOG00000004910	Eif2d	100	88.287	ENSNGAG00000017892	Eif2d	99	88.287	Nannospalax_galili
ENSRNOG00000004910	Eif2d	100	56.522	ENSNBRG00000017231	eif2d	99	56.684	Neolamprologus_brichardi
ENSRNOG00000004910	Eif2d	100	81.475	ENSNLEG00000000648	EIF2D	99	88.889	Nomascus_leucogenys
ENSRNOG00000004910	Eif2d	100	71.134	ENSMEUG00000008777	EIF2D	99	71.134	Notamacropus_eugenii
ENSRNOG00000004910	Eif2d	86	78.947	ENSOPRG00000000585	EIF2D	86	78.947	Ochotona_princeps
ENSRNOG00000004910	Eif2d	100	80.000	ENSODEG00000005533	EIF2D	100	80.000	Octodon_degus
ENSRNOG00000004910	Eif2d	99	55.743	ENSONIG00000017293	eif2d	99	56.000	Oreochromis_niloticus
ENSRNOG00000004910	Eif2d	86	56.324	ENSOANG00000002339	EIF2D	99	56.324	Ornithorhynchus_anatinus
ENSRNOG00000004910	Eif2d	100	80.105	ENSOCUG00000015451	EIF2D	99	80.105	Oryctolagus_cuniculus
ENSRNOG00000004910	Eif2d	100	54.992	ENSORLG00000010491	eif2d	99	54.992	Oryzias_latipes
ENSRNOG00000004910	Eif2d	100	54.013	ENSORLG00020021017	eif2d	99	54.013	Oryzias_latipes_hni
ENSRNOG00000004910	Eif2d	100	54.515	ENSORLG00015016577	eif2d	99	54.515	Oryzias_latipes_hsok
ENSRNOG00000004910	Eif2d	100	54.730	ENSOMEG00000010533	eif2d	99	54.730	Oryzias_melastigma
ENSRNOG00000004910	Eif2d	100	80.993	ENSOGAG00000010156	EIF2D	99	80.993	Otolemur_garnettii
ENSRNOG00000004910	Eif2d	100	80.379	ENSOARG00000005917	EIF2D	99	80.345	Ovis_aries
ENSRNOG00000004910	Eif2d	100	81.647	ENSPPAG00000034016	EIF2D	99	81.647	Pan_paniscus
ENSRNOG00000004910	Eif2d	100	80.961	ENSPPRG00000010958	EIF2D	99	87.778	Panthera_pardus
ENSRNOG00000004910	Eif2d	85	79.600	ENSPTIG00000012728	EIF2D	99	85.567	Panthera_tigris_altaica
ENSRNOG00000004910	Eif2d	100	81.475	ENSPTRG00000001913	EIF2D	99	88.333	Pan_troglodytes
ENSRNOG00000004910	Eif2d	100	81.304	ENSPANG00000012287	EIF2D	99	88.333	Papio_anubis
ENSRNOG00000004910	Eif2d	100	56.661	ENSPKIG00000012100	eif2d	99	56.661	Paramormyrops_kingsleyae
ENSRNOG00000004910	Eif2d	100	62.437	ENSPSIG00000003547	EIF2D	99	62.895	Pelodiscus_sinensis
ENSRNOG00000004910	Eif2d	100	55.008	ENSPMGG00000011913	eif2d	99	55.008	Periophthalmus_magnuspinnatus
ENSRNOG00000004910	Eif2d	100	90.035	ENSPEMG00000010082	Eif2d	100	90.035	Peromyscus_maniculatus_bairdii
ENSRNOG00000004910	Eif2d	100	71.821	ENSPCIG00000001093	EIF2D	99	71.821	Phascolarctos_cinereus
ENSRNOG00000004910	Eif2d	99	53.679	ENSPFOG00000012940	eif2d	99	53.679	Poecilia_formosa
ENSRNOG00000004910	Eif2d	100	55.769	ENSPLAG00000019930	eif2d	99	55.769	Poecilia_latipinna
ENSRNOG00000004910	Eif2d	100	53.245	ENSPMEG00000007895	eif2d	99	53.744	Poecilia_mexicana
ENSRNOG00000004910	Eif2d	100	53.731	ENSPREG00000015967	eif2d	99	53.731	Poecilia_reticulata
ENSRNOG00000004910	Eif2d	100	81.818	ENSPPYG00000000285	EIF2D	99	81.818	Pongo_abelii
ENSRNOG00000004910	Eif2d	100	71.233	ENSPCAG00000010685	EIF2D	99	71.233	Procavia_capensis
ENSRNOG00000004910	Eif2d	100	80.308	ENSPCOG00000028365	EIF2D	99	88.889	Propithecus_coquereli
ENSRNOG00000004910	Eif2d	100	78.938	ENSPVAG00000008053	EIF2D	99	79.795	Pteropus_vampyrus
ENSRNOG00000004910	Eif2d	100	45.979	ENSPNYG00000004459	eif2d	99	45.804	Pundamilia_nyererei
ENSRNOG00000004910	Eif2d	100	54.362	ENSPNAG00000000143	eif2d	99	54.591	Pygocentrus_nattereri
ENSRNOG00000004910	Eif2d	100	81.475	ENSRBIG00000011644	EIF2D	99	86.813	Rhinopithecus_bieti
ENSRNOG00000004910	Eif2d	100	81.475	ENSRROG00000034152	EIF2D	99	86.813	Rhinopithecus_roxellana
ENSRNOG00000004910	Eif2d	100	80.617	ENSSBOG00000018387	EIF2D	99	86.813	Saimiri_boliviensis_boliviensis
ENSRNOG00000004910	Eif2d	99	60.794	ENSSHAG00000016470	-	99	60.794	Sarcophilus_harrisii
ENSRNOG00000004910	Eif2d	100	72.213	ENSSHAG00000017769	-	99	72.213	Sarcophilus_harrisii
ENSRNOG00000004910	Eif2d	100	56.492	ENSSFOG00015014988	eif2d	99	56.492	Scleropages_formosus
ENSRNOG00000004910	Eif2d	100	54.409	ENSSMAG00000010879	eif2d	99	54.849	Scophthalmus_maximus
ENSRNOG00000004910	Eif2d	91	65.625	ENSSDUG00000014517	eif2d	99	55.537	Seriola_dumerili
ENSRNOG00000004910	Eif2d	85	70.459	ENSSARG00000012911	EIF2D	99	70.459	Sorex_araneus
ENSRNOG00000004910	Eif2d	100	63.211	ENSSPUG00000008418	EIF2D	99	63.211	Sphenodon_punctatus
ENSRNOG00000004910	Eif2d	100	56.684	ENSSPAG00000002966	eif2d	99	56.684	Stegastes_partitus
ENSRNOG00000004910	Eif2d	100	79.795	ENSSSCG00000015648	EIF2D	97	80.651	Sus_scrofa
ENSRNOG00000004910	Eif2d	97	61.687	ENSTGUG00000001092	EIF2D	99	61.687	Taeniopygia_guttata
ENSRNOG00000004910	Eif2d	100	56.944	ENSTRUG00000012383	eif2d	99	56.507	Takifugu_rubripes
ENSRNOG00000004910	Eif2d	100	55.688	ENSTNIG00000017906	eif2d	99	55.688	Tetraodon_nigroviridis
ENSRNOG00000004910	Eif2d	74	92.105	ENSTBEG00000017584	EIF2D	72	92.105	Tupaia_belangeri
ENSRNOG00000004910	Eif2d	100	74.957	ENSTTRG00000012099	EIF2D	99	75.643	Tursiops_truncatus
ENSRNOG00000004910	Eif2d	100	78.462	ENSUAMG00000022745	EIF2D	99	78.462	Ursus_americanus
ENSRNOG00000004910	Eif2d	100	70.588	ENSUMAG00000004182	EIF2D	99	76.285	Ursus_maritimus
ENSRNOG00000004910	Eif2d	66	87.500	ENSVPAG00000007046	EIF2D	67	87.500	Vicugna_pacos
ENSRNOG00000004910	Eif2d	99	79.581	ENSVVUG00000013525	EIF2D	99	79.690	Vulpes_vulpes
ENSRNOG00000004910	Eif2d	100	56.588	ENSXETG00000023678	eif2d	99	56.588	Xenopus_tropicalis
ENSRNOG00000004910	Eif2d	100	54.027	ENSXCOG00000011402	eif2d	99	54.958	Xiphophorus_couchianus
ENSRNOG00000004910	Eif2d	99	54.561	ENSXMAG00000014696	eif2d	99	54.992	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001731	formation of translation preinitiation complex	21873635.	IBA	Process
GO:0001731	formation of translation preinitiation complex	-	ISO	Process
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0003743	translation initiation factor activity	-	ISS	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005829	cytosol	-	ISO	Component
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0022627	cytosolic small ribosomal subunit	21873635.	IBA	Component
GO:0022627	cytosolic small ribosomal subunit	-	ISO	Component
GO:0032790	ribosome disassembly	-	IEA	Process
GO:0032790	ribosome disassembly	-	ISO	Process
GO:0075522	IRES-dependent viral translational initiation	-	IEA	Process
GO:0075522	IRES-dependent viral translational initiation	-	ISO	Process