EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000004941 (Gene tree)
Gene ID: 688393
Gene Symbol: Gpn1
Alias: LOC688393
Full Name: GPN-loop GTPase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 29884 bases
Position: chr6:26242925-26272808
Accession: 1589985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000006599	GTP_EFTU	PF00009.27	4.7e-08	1	1
ENSRNOP00000069978	GTP_EFTU	PF00009.27	4.7e-08	1	1
ENSRNOP00000006599	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSRNOP00000069978	MMR_HSR1	PF01926.23	1.4e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000006599	-	1669	-	ENSRNOP00000006599	373 (aa)	-	B1WBZ7
ENSRNOT00000087938	-	1498	-	ENSRNOP00000069978	373 (aa)	-	B1WBZ7

Gene Model

Click here to download ENSRNOG00000004941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000004941's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000004941	Gpn1	98	91.758	ENSG00000198522	GPN1	99	92.150	Homo_sapiens
ENSRNOG00000004941	Gpn1	99	92.204	ENSAMEG00000001201	GPN1	93	92.778	Ailuropoda_melanoleuca
ENSRNOG00000004941	Gpn1	97	77.285	ENSAPEG00000000050	gpn1	91	77.285	Amphiprion_percula
ENSRNOG00000004941	Gpn1	84	75.873	ENSAPEG00000000067	gpn1	87	70.381	Amphiprion_percula
ENSRNOG00000004941	Gpn1	98	77.929	ENSATEG00000015542	gpn1	95	78.729	Anabas_testudineus
ENSRNOG00000004941	Gpn1	92	78.902	ENSAPLG00000003530	GPN1	99	78.902	Anas_platyrhynchos
ENSRNOG00000004941	Gpn1	90	74.561	ENSACAG00000008974	GPN1	99	76.023	Anolis_carolinensis
ENSRNOG00000004941	Gpn1	99	90.591	ENSANAG00000024716	GPN1	93	90.556	Aotus_nancymaae
ENSRNOG00000004941	Gpn1	97	78.729	ENSACLG00000025644	gpn1	90	78.393	Astatotilapia_calliptera
ENSRNOG00000004941	Gpn1	97	78.729	ENSAMXG00000031098	gpn1	89	78.453	Astyanax_mexicanus
ENSRNOG00000004941	Gpn1	68	62.891	WBGene00001661	gop-2	67	64.706	Caenorhabditis_elegans
ENSRNOG00000004941	Gpn1	97	91.389	ENSCJAG00000046633	GPN1	93	91.389	Callithrix_jacchus
ENSRNOG00000004941	Gpn1	97	92.500	ENSCAFG00000005160	-	92	92.500	Canis_familiaris
ENSRNOG00000004941	Gpn1	74	80.576	ENSCAFG00000024379	-	100	80.935	Canis_familiaris
ENSRNOG00000004941	Gpn1	54	93.500	ENSCAFG00000032406	-	98	90.995	Canis_familiaris
ENSRNOG00000004941	Gpn1	97	92.222	ENSCAFG00020020326	-	96	92.222	Canis_lupus_dingo
ENSRNOG00000004941	Gpn1	97	91.944	ENSCAFG00020022034	-	95	91.944	Canis_lupus_dingo
ENSRNOG00000004941	Gpn1	100	84.987	ENSCHIG00000017789	-	96	85.873	Capra_hircus
ENSRNOG00000004941	Gpn1	99	90.591	ENSTSYG00000006604	GPN1	96	91.365	Carlito_syrichta
ENSRNOG00000004941	Gpn1	79	91.497	ENSCAPG00000015026	GPN1	90	91.497	Cavia_aperea
ENSRNOG00000004941	Gpn1	100	90.080	ENSCPOG00000004359	GPN1	97	91.690	Cavia_porcellus
ENSRNOG00000004941	Gpn1	97	91.667	ENSCCAG00000035409	GPN1	93	91.667	Cebus_capucinus
ENSRNOG00000004941	Gpn1	97	92.222	ENSCATG00000042260	GPN1	93	92.222	Cercocebus_atys
ENSRNOG00000004941	Gpn1	100	90.885	ENSCLAG00000008226	GPN1	97	92.521	Chinchilla_lanigera
ENSRNOG00000004941	Gpn1	97	92.222	ENSCSAG00000010222	GPN1	93	92.222	Chlorocebus_sabaeus
ENSRNOG00000004941	Gpn1	97	80.939	ENSCPBG00000009367	GPN1	96	81.163	Chrysemys_picta_bellii
ENSRNOG00000004941	Gpn1	72	68.266	ENSCING00000023847	-	77	71.020	Ciona_intestinalis
ENSRNOG00000004941	Gpn1	76	67.491	ENSCSAVG00000004925	-	90	67.491	Ciona_savignyi
ENSRNOG00000004941	Gpn1	97	91.944	ENSCANG00000031249	GPN1	99	92.150	Colobus_angolensis_palliatus
ENSRNOG00000004941	Gpn1	100	95.442	ENSCGRG00001017621	Gpn1	97	95.845	Cricetulus_griseus_chok1gshd
ENSRNOG00000004941	Gpn1	100	95.442	ENSCGRG00000003560	Gpn1	97	95.845	Cricetulus_griseus_crigri
ENSRNOG00000004941	Gpn1	94	71.751	ENSCSEG00000019468	gpn1	89	71.751	Cynoglossus_semilaevis
ENSRNOG00000004941	Gpn1	97	79.167	ENSDARG00000043928	gpn1	86	81.739	Danio_rerio
ENSRNOG00000004941	Gpn1	99	90.860	ENSDORG00000006558	Gpn1	95	91.111	Dipodomys_ordii
ENSRNOG00000004941	Gpn1	83	53.651	FBgn0040346	CG3704	64	61.789	Drosophila_melanogaster
ENSRNOG00000004941	Gpn1	97	92.222	ENSEASG00005009082	GPN1	96	92.222	Equus_asinus_asinus
ENSRNOG00000004941	Gpn1	97	86.389	ENSECAG00000009579	GPN1	96	86.389	Equus_caballus
ENSRNOG00000004941	Gpn1	98	92.033	ENSEEUG00000013421	GPN1	95	91.944	Erinaceus_europaeus
ENSRNOG00000004941	Gpn1	97	75.824	ENSELUG00000006293	gpn1	89	76.404	Esox_lucius
ENSRNOG00000004941	Gpn1	91	92.625	ENSFCAG00000030425	GPN1	99	93.515	Felis_catus
ENSRNOG00000004941	Gpn1	87	80.923	ENSFALG00000011331	GPN1	96	80.923	Ficedula_albicollis
ENSRNOG00000004941	Gpn1	100	89.008	ENSFDAG00000014526	GPN1	97	90.859	Fukomys_damarensis
ENSRNOG00000004941	Gpn1	92	78.841	ENSGMOG00000016174	gpn1	97	78.841	Gadus_morhua
ENSRNOG00000004941	Gpn1	95	80.056	ENSGALG00000016505	GPN1	98	79.224	Gallus_gallus
ENSRNOG00000004941	Gpn1	96	77.285	ENSGAFG00000016670	gpn1	73	78.551	Gambusia_affinis
ENSRNOG00000004941	Gpn1	95	77.591	ENSGACG00000017639	gpn1	96	81.040	Gasterosteus_aculeatus
ENSRNOG00000004941	Gpn1	97	81.440	ENSGAGG00000016449	GPN1	95	81.440	Gopherus_agassizii
ENSRNOG00000004941	Gpn1	98	91.758	ENSGGOG00000015285	GPN1	93	91.944	Gorilla_gorilla
ENSRNOG00000004941	Gpn1	97	78.453	ENSHBUG00000022933	gpn1	90	78.116	Haplochromis_burtoni
ENSRNOG00000004941	Gpn1	100	87.668	ENSHGLG00000010319	GPN1	96	89.444	Heterocephalus_glaber_female
ENSRNOG00000004941	Gpn1	100	87.668	ENSHGLG00100016905	GPN1	96	89.444	Heterocephalus_glaber_male
ENSRNOG00000004941	Gpn1	98	77.049	ENSIPUG00000011938	gpn1	90	77.839	Ictalurus_punctatus
ENSRNOG00000004941	Gpn1	100	91.957	ENSSTOG00000006379	-	97	93.352	Ictidomys_tridecemlineatus
ENSRNOG00000004941	Gpn1	98	74.451	ENSKMAG00000011063	gpn1	92	74.792	Kryptolebias_marmoratus
ENSRNOG00000004941	Gpn1	62	87.826	ENSLACG00000001268	GPN1	98	88.053	Latimeria_chalumnae
ENSRNOG00000004941	Gpn1	99	77.236	ENSLOCG00000015949	gpn1	90	78.611	Lepisosteus_oculatus
ENSRNOG00000004941	Gpn1	99	91.129	ENSLAFG00000011179	GPN1	97	91.944	Loxodonta_africana
ENSRNOG00000004941	Gpn1	97	92.222	ENSMFAG00000035863	GPN1	93	92.222	Macaca_fascicularis
ENSRNOG00000004941	Gpn1	97	92.222	ENSMMUG00000019745	GPN1	93	92.222	Macaca_mulatta
ENSRNOG00000004941	Gpn1	97	92.222	ENSMNEG00000027876	GPN1	93	92.222	Macaca_nemestrina
ENSRNOG00000004941	Gpn1	97	86.111	ENSMLEG00000031376	GPN1	96	78.731	Mandrillus_leucophaeus
ENSRNOG00000004941	Gpn1	97	78.729	ENSMZEG00005003265	gpn1	90	78.393	Maylandia_zebra
ENSRNOG00000004941	Gpn1	83	79.808	ENSMGAG00000014062	GPN1	98	79.808	Meleagris_gallopavo
ENSRNOG00000004941	Gpn1	97	95.568	ENSMAUG00000018225	Gpn1	97	95.568	Mesocricetus_auratus
ENSRNOG00000004941	Gpn1	99	91.667	ENSMICG00000042626	GPN1	96	92.222	Microcebus_murinus
ENSRNOG00000004941	Gpn1	97	95.291	ENSMOCG00000021769	Gpn1	97	95.291	Microtus_ochrogaster
ENSRNOG00000004941	Gpn1	96	77.198	ENSMMOG00000002005	gpn1	73	75.824	Mola_mola
ENSRNOG00000004941	Gpn1	95	87.042	ENSMODG00000015592	GPN1	95	86.630	Monodelphis_domestica
ENSRNOG00000004941	Gpn1	99	78.016	ENSMALG00000015121	gpn1	84	77.686	Monopterus_albus
ENSRNOG00000004941	Gpn1	100	94.906	MGP_CAROLIEiJ_G0027095	Gpn1	97	95.568	Mus_caroli
ENSRNOG00000004941	Gpn1	100	95.442	ENSMUSG00000064037	Gpn1	97	95.845	Mus_musculus
ENSRNOG00000004941	Gpn1	93	95.665	MGP_PahariEiJ_G0029286	Gpn1	93	96.108	Mus_pahari
ENSRNOG00000004941	Gpn1	100	95.174	MGP_SPRETEiJ_G0028091	Gpn1	97	95.291	Mus_spretus
ENSRNOG00000004941	Gpn1	97	91.690	ENSMLUG00000011928	GPN1	94	91.690	Myotis_lucifugus
ENSRNOG00000004941	Gpn1	98	92.033	ENSNLEG00000003945	GPN1	99	92.150	Nomascus_leucogenys
ENSRNOG00000004941	Gpn1	98	91.484	ENSOPRG00000013015	GPN1	96	91.389	Ochotona_princeps
ENSRNOG00000004941	Gpn1	100	90.080	ENSODEG00000007092	GPN1	97	91.413	Octodon_degus
ENSRNOG00000004941	Gpn1	99	77.600	ENSONIG00000003361	gpn1	93	77.384	Oreochromis_niloticus
ENSRNOG00000004941	Gpn1	95	78.873	ENSORLG00020015676	gpn1	90	75.224	Oryzias_latipes_hni
ENSRNOG00000004941	Gpn1	100	75.591	ENSORLG00015013049	gpn1	91	79.155	Oryzias_latipes_hsok
ENSRNOG00000004941	Gpn1	100	75.591	ENSOMEG00000022023	gpn1	92	78.711	Oryzias_melastigma
ENSRNOG00000004941	Gpn1	90	90.419	ENSOGAG00000014057	GPN1	93	90.419	Otolemur_garnettii
ENSRNOG00000004941	Gpn1	98	92.033	ENSPPAG00000022926	GPN1	93	91.944	Pan_paniscus
ENSRNOG00000004941	Gpn1	99	91.398	ENSPPRG00000001472	GPN1	96	92.537	Panthera_pardus
ENSRNOG00000004941	Gpn1	99	91.398	ENSPTIG00000007504	GPN1	96	92.537	Panthera_tigris_altaica
ENSRNOG00000004941	Gpn1	98	91.758	ENSPTRG00000011776	GPN1	93	91.667	Pan_troglodytes
ENSRNOG00000004941	Gpn1	97	92.222	ENSPANG00000011578	GPN1	93	92.222	Papio_anubis
ENSRNOG00000004941	Gpn1	92	81.159	ENSPKIG00000007460	gpn1	86	81.159	Paramormyrops_kingsleyae
ENSRNOG00000004941	Gpn1	99	70.777	ENSPMGG00000013238	gpn1	90	69.613	Periophthalmus_magnuspinnatus
ENSRNOG00000004941	Gpn1	100	95.442	ENSPEMG00000003913	Gpn1	97	95.568	Peromyscus_maniculatus_bairdii
ENSRNOG00000004941	Gpn1	95	87.288	ENSPCIG00000026182	GPN1	93	87.324	Phascolarctos_cinereus
ENSRNOG00000004941	Gpn1	99	74.731	ENSPFOG00000000034	gpn1	91	75.978	Poecilia_formosa
ENSRNOG00000004941	Gpn1	99	74.731	ENSPLAG00000023798	gpn1	91	76.257	Poecilia_latipinna
ENSRNOG00000004941	Gpn1	99	75.269	ENSPMEG00000002283	gpn1	91	76.816	Poecilia_mexicana
ENSRNOG00000004941	Gpn1	97	77.072	ENSPREG00000009028	gpn1	98	72.622	Poecilia_reticulata
ENSRNOG00000004941	Gpn1	98	82.692	ENSPPYG00000012538	GPN1	89	92.256	Pongo_abelii
ENSRNOG00000004941	Gpn1	97	92.778	ENSPCOG00000028038	GPN1	96	92.778	Propithecus_coquereli
ENSRNOG00000004941	Gpn1	93	89.017	ENSPVAG00000015220	GPN1	97	89.222	Pteropus_vampyrus
ENSRNOG00000004941	Gpn1	97	78.729	ENSPNYG00000019130	gpn1	90	78.393	Pundamilia_nyererei
ENSRNOG00000004941	Gpn1	94	75.766	ENSPNAG00000010900	gpn1	77	81.505	Pygocentrus_nattereri
ENSRNOG00000004941	Gpn1	97	92.222	ENSRBIG00000038211	GPN1	93	92.222	Rhinopithecus_bieti
ENSRNOG00000004941	Gpn1	97	92.222	ENSRROG00000026146	GPN1	99	92.491	Rhinopithecus_roxellana
ENSRNOG00000004941	Gpn1	79	54.125	YJR072C	NPA3	63	61.728	Saccharomyces_cerevisiae
ENSRNOG00000004941	Gpn1	98	91.758	ENSSBOG00000025586	GPN1	93	91.667	Saimiri_boliviensis_boliviensis
ENSRNOG00000004941	Gpn1	97	79.282	ENSSFOG00015019441	gpn1	90	79.224	Scleropages_formosus
ENSRNOG00000004941	Gpn1	95	77.159	ENSSMAG00000005973	gpn1	90	76.164	Scophthalmus_maximus
ENSRNOG00000004941	Gpn1	97	76.839	ENSSDUG00000006929	gpn1	95	73.770	Seriola_dumerili
ENSRNOG00000004941	Gpn1	97	77.135	ENSSLDG00000014532	gpn1	90	77.348	Seriola_lalandi_dorsalis
ENSRNOG00000004941	Gpn1	83	82.201	ENSSPAG00000015690	gpn1	82	80.952	Stegastes_partitus
ENSRNOG00000004941	Gpn1	100	90.617	ENSSSCG00000008546	GPN1	97	91.413	Sus_scrofa
ENSRNOG00000004941	Gpn1	92	81.844	ENSTGUG00000014626	GPN1	96	81.556	Taeniopygia_guttata
ENSRNOG00000004941	Gpn1	92	79.070	ENSTRUG00000004290	gpn1	87	78.000	Takifugu_rubripes
ENSRNOG00000004941	Gpn1	92	80.580	ENSTNIG00000002572	gpn1	91	80.580	Tetraodon_nigroviridis
ENSRNOG00000004941	Gpn1	99	91.398	ENSTBEG00000007425	GPN1	96	91.667	Tupaia_belangeri
ENSRNOG00000004941	Gpn1	99	90.860	ENSTTRG00000012531	GPN1	96	89.444	Tursiops_truncatus
ENSRNOG00000004941	Gpn1	79	81.695	ENSUAMG00000012406	-	98	85.294	Ursus_americanus
ENSRNOG00000004941	Gpn1	99	92.473	ENSUMAG00000020247	GPN1	85	93.056	Ursus_maritimus
ENSRNOG00000004941	Gpn1	97	75.967	ENSXMAG00000005436	gpn1	79	77.299	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component