EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000005258 (Gene tree)
Gene ID: 679712
Gene Symbol: Myef2
Alias: LOC362207|MGC109392
Full Name: myelin expression factor 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 35180 bases
Position: chr3:117354382-117389561
Accession: 1306547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000007103	RRM_1	PF00076.22	4.1e-56	1	3
ENSRNOP00000007103	RRM_1	PF00076.22	4.1e-56	2	3
ENSRNOP00000007103	RRM_1	PF00076.22	4.1e-56	3	3
ENSRNOP00000072845	RRM_1	PF00076.22	2e-54	1	3
ENSRNOP00000072845	RRM_1	PF00076.22	2e-54	2	3
ENSRNOP00000072845	RRM_1	PF00076.22	2e-54	3	3

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000007103	-	1776	XM_006234930	ENSRNOP00000007103	591 (aa)	XP_006234992	D4AEI5
ENSRNOT00000081533	-	2080	-	ENSRNOP00000072845	591 (aa)	-	A0A0G2K402

Gene Model

Click here to download ENSRNOG00000005258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000005258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000005258	Myef2	54	33.981	ENSRNOG00000008639	Pabpc1	50	35.802
ENSRNOG00000005258	Myef2	97	42.681	ENSRNOG00000007921	Hnrnpm	84	51.974
ENSRNOG00000005258	Myef2	59	42.254	ENSRNOG00000017367	Pabpc6	58	38.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000005258	Myef2	100	90.500	ENSG00000104177	MYEF2	99	96.800	Homo_sapiens
ENSRNOG00000005258	Myef2	98	62.333	ENSAPOG00000015050	myef2	98	65.488	Acanthochromis_polyacanthus
ENSRNOG00000005258	Myef2	94	93.571	ENSAMEG00000001964	MYEF2	100	93.571	Ailuropoda_melanoleuca
ENSRNOG00000005258	Myef2	91	65.683	ENSACIG00000020446	myef2	98	61.616	Amphilophus_citrinellus
ENSRNOG00000005258	Myef2	96	63.158	ENSAOCG00000017431	myef2	98	65.714	Amphiprion_ocellaris
ENSRNOG00000005258	Myef2	96	62.988	ENSAPEG00000024834	myef2	98	65.546	Amphiprion_percula
ENSRNOG00000005258	Myef2	95	64.111	ENSATEG00000017892	myef2	96	65.345	Anabas_testudineus
ENSRNOG00000005258	Myef2	92	80.686	ENSAPLG00000008935	MYEF2	99	80.686	Anas_platyrhynchos
ENSRNOG00000005258	Myef2	100	69.279	ENSACAG00000004806	MYEF2	100	70.219	Anolis_carolinensis
ENSRNOG00000005258	Myef2	100	91.167	ENSANAG00000036558	MYEF2	100	91.500	Aotus_nancymaae
ENSRNOG00000005258	Myef2	91	63.100	ENSACLG00000017421	myef2	96	64.591	Astatotilapia_calliptera
ENSRNOG00000005258	Myef2	94	61.972	ENSAMXG00000038244	myef2	95	67.596	Astyanax_mexicanus
ENSRNOG00000005258	Myef2	100	92.000	ENSBTAG00000008771	MYEF2	100	92.000	Bos_taurus
ENSRNOG00000005258	Myef2	100	91.167	ENSCJAG00000001875	MYEF2	100	91.167	Callithrix_jacchus
ENSRNOG00000005258	Myef2	87	93.409	ENSCAFG00000014008	MYEF2	100	93.409	Canis_familiaris
ENSRNOG00000005258	Myef2	74	92.830	ENSCAFG00020022004	-	97	92.636	Canis_lupus_dingo
ENSRNOG00000005258	Myef2	100	85.000	ENSCHIG00000022164	MYEF2	100	87.500	Capra_hircus
ENSRNOG00000005258	Myef2	100	92.487	ENSTSYG00000010575	MYEF2	100	95.247	Carlito_syrichta
ENSRNOG00000005258	Myef2	95	86.420	ENSCAPG00000017762	MYEF2	99	86.420	Cavia_aperea
ENSRNOG00000005258	Myef2	100	85.260	ENSCPOG00000010584	MYEF2	100	85.260	Cavia_porcellus
ENSRNOG00000005258	Myef2	100	91.500	ENSCCAG00000033878	MYEF2	100	95.064	Cebus_capucinus
ENSRNOG00000005258	Myef2	100	91.000	ENSCATG00000039268	MYEF2	100	94.516	Cercocebus_atys
ENSRNOG00000005258	Myef2	100	92.127	ENSCLAG00000008328	MYEF2	100	92.127	Chinchilla_lanigera
ENSRNOG00000005258	Myef2	100	91.000	ENSCSAG00000010366	MYEF2	100	91.000	Chlorocebus_sabaeus
ENSRNOG00000005258	Myef2	77	92.857	ENSCHOG00000011348	-	70	92.857	Choloepus_hoffmanni
ENSRNOG00000005258	Myef2	100	77.504	ENSCPBG00000024789	MYEF2	100	77.905	Chrysemys_picta_bellii
ENSRNOG00000005258	Myef2	100	91.167	ENSCANG00000022275	MYEF2	100	94.698	Colobus_angolensis_palliatus
ENSRNOG00000005258	Myef2	100	98.308	ENSCGRG00001024080	-	100	98.308	Cricetulus_griseus_chok1gshd
ENSRNOG00000005258	Myef2	92	98.535	ENSCGRG00000012257	-	100	98.535	Cricetulus_griseus_crigri
ENSRNOG00000005258	Myef2	93	60.714	ENSCSEG00000005597	myef2	91	61.429	Cynoglossus_semilaevis
ENSRNOG00000005258	Myef2	59	69.355	ENSCVAG00000010801	myef2	79	54.359	Cyprinodon_variegatus
ENSRNOG00000005258	Myef2	99	60.637	ENSDARG00000059398	myef2	96	64.098	Danio_rerio
ENSRNOG00000005258	Myef2	100	86.477	ENSDNOG00000038711	MYEF2	100	87.145	Dasypus_novemcinctus
ENSRNOG00000005258	Myef2	92	93.715	ENSDORG00000015835	-	100	93.715	Dipodomys_ordii
ENSRNOG00000005258	Myef2	87	83.059	ENSETEG00000005360	MYEF2	100	83.529	Echinops_telfairi
ENSRNOG00000005258	Myef2	64	59.344	ENSEBUG00000016563	myef2	89	51.064	Eptatretus_burgeri
ENSRNOG00000005258	Myef2	100	84.098	ENSEASG00005017818	MYEF2	100	85.455	Equus_asinus_asinus
ENSRNOG00000005258	Myef2	100	90.579	ENSECAG00000005741	MYEF2	100	92.167	Equus_caballus
ENSRNOG00000005258	Myef2	100	90.579	ENSECAG00000034546	-	100	92.167	Equus_caballus
ENSRNOG00000005258	Myef2	70	100.000	ENSEEUG00000006405	MYEF2	78	100.000	Erinaceus_europaeus
ENSRNOG00000005258	Myef2	91	63.158	ENSELUG00000003712	myef2	81	67.027	Esox_lucius
ENSRNOG00000005258	Myef2	100	90.413	ENSFCAG00000027198	MYEF2	100	92.167	Felis_catus
ENSRNOG00000005258	Myef2	92	79.422	ENSFALG00000011565	MYEF2	99	79.783	Ficedula_albicollis
ENSRNOG00000005258	Myef2	92	95.055	ENSFDAG00000007098	MYEF2	100	95.055	Fukomys_damarensis
ENSRNOG00000005258	Myef2	95	59.474	ENSFHEG00000002386	myef2	96	63.589	Fundulus_heteroclitus
ENSRNOG00000005258	Myef2	76	64.885	ENSGMOG00000008489	myef2	99	61.634	Gadus_morhua
ENSRNOG00000005258	Myef2	94	80.427	ENSGALG00000032546	MYEF2	100	75.845	Gallus_gallus
ENSRNOG00000005258	Myef2	95	61.754	ENSGAFG00000005838	myef2	96	63.002	Gambusia_affinis
ENSRNOG00000005258	Myef2	91	65.091	ENSGACG00000016759	myef2	100	66.187	Gasterosteus_aculeatus
ENSRNOG00000005258	Myef2	100	73.399	ENSGAGG00000015265	MYEF2	100	73.235	Gopherus_agassizii
ENSRNOG00000005258	Myef2	100	91.167	ENSGGOG00000014968	MYEF2	100	94.698	Gorilla_gorilla
ENSRNOG00000005258	Myef2	95	64.572	ENSHBUG00000015847	myef2	96	66.552	Haplochromis_burtoni
ENSRNOG00000005258	Myef2	100	90.101	ENSHGLG00000018166	MYEF2	100	90.436	Heterocephalus_glaber_female
ENSRNOG00000005258	Myef2	92	92.421	ENSHGLG00100014102	MYEF2	100	92.791	Heterocephalus_glaber_male
ENSRNOG00000005258	Myef2	96	61.313	ENSHCOG00000001652	myef2	98	63.385	Hippocampus_comes
ENSRNOG00000005258	Myef2	95	57.143	ENSIPUG00000018589	myef2	96	57.867	Ictalurus_punctatus
ENSRNOG00000005258	Myef2	92	95.238	ENSSTOG00000007740	MYEF2	100	95.238	Ictidomys_tridecemlineatus
ENSRNOG00000005258	Myef2	91	93.704	ENSJJAG00000015428	-	99	93.704	Jaculus_jaculus
ENSRNOG00000005258	Myef2	95	62.587	ENSKMAG00000002383	myef2	96	66.783	Kryptolebias_marmoratus
ENSRNOG00000005258	Myef2	92	62.929	ENSLBEG00000005649	myef2	96	62.847	Labrus_bergylta
ENSRNOG00000005258	Myef2	51	83.498	ENSLACG00000006382	MYEF2	100	69.778	Latimeria_chalumnae
ENSRNOG00000005258	Myef2	97	65.685	ENSLOCG00000013241	myef2	98	69.573	Lepisosteus_oculatus
ENSRNOG00000005258	Myef2	100	90.985	ENSLAFG00000012990	MYEF2	100	90.985	Loxodonta_africana
ENSRNOG00000005258	Myef2	100	91.000	ENSMFAG00000046361	MYEF2	100	94.516	Macaca_fascicularis
ENSRNOG00000005258	Myef2	100	91.167	ENSMMUG00000018834	MYEF2	100	91.167	Macaca_mulatta
ENSRNOG00000005258	Myef2	100	91.000	ENSMNEG00000028845	MYEF2	100	91.000	Macaca_nemestrina
ENSRNOG00000005258	Myef2	100	91.000	ENSMLEG00000038724	MYEF2	100	94.516	Mandrillus_leucophaeus
ENSRNOG00000005258	Myef2	93	65.133	ENSMAMG00000011476	myef2	96	66.265	Mastacembelus_armatus
ENSRNOG00000005258	Myef2	95	63.351	ENSMZEG00005011832	myef2	96	66.724	Maylandia_zebra
ENSRNOG00000005258	Myef2	92	79.459	ENSMGAG00000006915	MYEF2	99	80.721	Meleagris_gallopavo
ENSRNOG00000005258	Myef2	100	97.970	ENSMAUG00000019642	-	100	97.970	Mesocricetus_auratus
ENSRNOG00000005258	Myef2	100	91.681	ENSMICG00000014513	MYEF2	100	95.064	Microcebus_murinus
ENSRNOG00000005258	Myef2	66	76.596	ENSMOCG00000021295	-	100	76.596	Microtus_ochrogaster
ENSRNOG00000005258	Myef2	100	97.631	ENSMOCG00000006917	-	100	97.631	Microtus_ochrogaster
ENSRNOG00000005258	Myef2	65	76.136	ENSMMOG00000021557	myef2	95	57.651	Mola_mola
ENSRNOG00000005258	Myef2	100	74.380	ENSMODG00000002744	MYEF2	83	74.545	Monodelphis_domestica
ENSRNOG00000005258	Myef2	78	77.093	ENSMALG00000012193	myef2	96	60.145	Monopterus_albus
ENSRNOG00000005258	Myef2	100	99.154	MGP_CAROLIEiJ_G0024222	Myef2	100	99.154	Mus_caroli
ENSRNOG00000005258	Myef2	99	78.704	ENSMUSG00000049230	Gm9833	97	87.778	Mus_musculus
ENSRNOG00000005258	Myef2	100	98.985	ENSMUSG00000027201	Myef2	100	98.985	Mus_musculus
ENSRNOG00000005258	Myef2	100	99.154	MGP_PahariEiJ_G0025667	Myef2	100	99.154	Mus_pahari
ENSRNOG00000005258	Myef2	79	98.571	MGP_PahariEiJ_G0025668	-	99	98.571	Mus_pahari
ENSRNOG00000005258	Myef2	68	87.812	MGP_SPRETEiJ_G0025142	-	99	87.812	Mus_spretus
ENSRNOG00000005258	Myef2	100	98.985	MGP_SPRETEiJ_G0025141	Myef2	100	98.985	Mus_spretus
ENSRNOG00000005258	Myef2	93	90.182	ENSMPUG00000011254	MYEF2	100	90.182	Mustela_putorius_furo
ENSRNOG00000005258	Myef2	92	85.000	ENSMLUG00000006781	MYEF2	100	86.000	Myotis_lucifugus
ENSRNOG00000005258	Myef2	100	94.426	ENSNGAG00000010756	-	100	94.426	Nannospalax_galili
ENSRNOG00000005258	Myef2	91	63.100	ENSNBRG00000023602	myef2	96	64.591	Neolamprologus_brichardi
ENSRNOG00000005258	Myef2	100	90.667	ENSNLEG00000005951	MYEF2	100	94.516	Nomascus_leucogenys
ENSRNOG00000005258	Myef2	74	83.333	ENSMEUG00000015210	-	83	81.388	Notamacropus_eugenii
ENSRNOG00000005258	Myef2	91	98.113	ENSOPRG00000003919	MYEF2	85	98.113	Ochotona_princeps
ENSRNOG00000005258	Myef2	100	87.940	ENSODEG00000007463	MYEF2	100	87.940	Octodon_degus
ENSRNOG00000005258	Myef2	95	60.461	ENSONIG00000013374	myef2	96	62.619	Oreochromis_niloticus
ENSRNOG00000005258	Myef2	92	72.727	ENSOANG00000007375	MYEF2	100	74.308	Ornithorhynchus_anatinus
ENSRNOG00000005258	Myef2	94	95.487	ENSOCUG00000013043	MYEF2	97	93.782	Oryctolagus_cuniculus
ENSRNOG00000005258	Myef2	95	63.573	ENSORLG00000002730	myef2	96	65.225	Oryzias_latipes
ENSRNOG00000005258	Myef2	95	63.398	ENSORLG00020021524	myef2	96	65.052	Oryzias_latipes_hni
ENSRNOG00000005258	Myef2	95	63.462	ENSORLG00015020877	myef2	96	65.225	Oryzias_latipes_hsok
ENSRNOG00000005258	Myef2	95	60.424	ENSOMEG00000010072	myef2	99	61.872	Oryzias_melastigma
ENSRNOG00000005258	Myef2	100	91.847	ENSOGAG00000010907	MYEF2	100	91.847	Otolemur_garnettii
ENSRNOG00000005258	Myef2	93	94.536	ENSOARG00000021027	MYEF2	100	94.536	Ovis_aries
ENSRNOG00000005258	Myef2	97	90.261	ENSPPAG00000041556	MYEF2	100	94.505	Pan_paniscus
ENSRNOG00000005258	Myef2	100	90.413	ENSPPRG00000011446	MYEF2	100	92.167	Panthera_pardus
ENSRNOG00000005258	Myef2	93	93.784	ENSPTIG00000018122	MYEF2	100	93.784	Panthera_tigris_altaica
ENSRNOG00000005258	Myef2	100	91.000	ENSPTRG00000007042	MYEF2	100	94.516	Pan_troglodytes
ENSRNOG00000005258	Myef2	100	91.000	ENSPANG00000017757	MYEF2	100	91.000	Papio_anubis
ENSRNOG00000005258	Myef2	71	61.905	ENSPKIG00000020643	myef2	88	61.905	Paramormyrops_kingsleyae
ENSRNOG00000005258	Myef2	92	60.254	ENSPKIG00000018344	MYEF2	94	62.274	Paramormyrops_kingsleyae
ENSRNOG00000005258	Myef2	94	81.851	ENSPSIG00000016637	MYEF2	98	82.270	Pelodiscus_sinensis
ENSRNOG00000005258	Myef2	80	70.000	ENSPMGG00000001513	myef2	88	70.000	Periophthalmus_magnuspinnatus
ENSRNOG00000005258	Myef2	92	94.322	ENSPEMG00000006286	-	100	94.322	Peromyscus_maniculatus_bairdii
ENSRNOG00000005258	Myef2	100	85.596	ENSPCIG00000022902	MYEF2	100	85.762	Phascolarctos_cinereus
ENSRNOG00000005258	Myef2	99	57.556	ENSPFOG00000001754	myef2	96	61.436	Poecilia_formosa
ENSRNOG00000005258	Myef2	99	58.097	ENSPLAG00000001538	myef2	96	62.674	Poecilia_latipinna
ENSRNOG00000005258	Myef2	91	61.302	ENSPLAG00000001814	MYEF2	95	64.014	Poecilia_latipinna
ENSRNOG00000005258	Myef2	99	58.431	ENSPMEG00000014953	MYEF2	96	62.500	Poecilia_mexicana
ENSRNOG00000005258	Myef2	99	58.431	ENSPMEG00000014250	myef2	96	62.500	Poecilia_mexicana
ENSRNOG00000005258	Myef2	99	58.221	ENSPREG00000010801	myef2	96	60.862	Poecilia_reticulata
ENSRNOG00000005258	Myef2	100	91.000	ENSPPYG00000006452	MYEF2	100	91.000	Pongo_abelii
ENSRNOG00000005258	Myef2	100	87.813	ENSPCAG00000016660	MYEF2	100	88.648	Procavia_capensis
ENSRNOG00000005258	Myef2	100	91.514	ENSPCOG00000024570	MYEF2	100	95.064	Propithecus_coquereli
ENSRNOG00000005258	Myef2	99	91.758	ENSPVAG00000004102	MYEF2	100	91.575	Pteropus_vampyrus
ENSRNOG00000005258	Myef2	91	63.653	ENSPNYG00000010879	myef2	96	64.845	Pundamilia_nyererei
ENSRNOG00000005258	Myef2	88	78.333	ENSPNAG00000026387	myef2	99	78.333	Pygocentrus_nattereri
ENSRNOG00000005258	Myef2	100	91.167	ENSRBIG00000037503	MYEF2	100	94.698	Rhinopithecus_bieti
ENSRNOG00000005258	Myef2	100	91.167	ENSRROG00000042861	MYEF2	100	94.698	Rhinopithecus_roxellana
ENSRNOG00000005258	Myef2	92	95.055	ENSSBOG00000029634	MYEF2	100	95.055	Saimiri_boliviensis_boliviensis
ENSRNOG00000005258	Myef2	92	90.842	ENSSHAG00000011695	MYEF2	99	90.842	Sarcophilus_harrisii
ENSRNOG00000005258	Myef2	94	54.955	ENSSFOG00015017915	myef2	97	56.128	Scleropages_formosus
ENSRNOG00000005258	Myef2	94	62.633	ENSSFOG00015012981	myef2	95	64.706	Scleropages_formosus
ENSRNOG00000005258	Myef2	91	63.718	ENSSMAG00000021279	myef2	98	66.845	Scophthalmus_maximus
ENSRNOG00000005258	Myef2	96	65.247	ENSSDUG00000015983	myef2	98	66.273	Seriola_dumerili
ENSRNOG00000005258	Myef2	86	93.067	ENSSARG00000003264	MYEF2	100	93.067	Sorex_araneus
ENSRNOG00000005258	Myef2	93	76.027	ENSSPUG00000011966	MYEF2	100	70.339	Sphenodon_punctatus
ENSRNOG00000005258	Myef2	96	61.252	ENSSPAG00000021514	myef2	98	64.706	Stegastes_partitus
ENSRNOG00000005258	Myef2	100	91.667	ENSSSCG00000004661	MYEF2	100	91.667	Sus_scrofa
ENSRNOG00000005258	Myef2	92	79.061	ENSTGUG00000007130	MYEF2	100	79.603	Taeniopygia_guttata
ENSRNOG00000005258	Myef2	91	63.838	ENSTRUG00000016967	myef2	91	59.524	Takifugu_rubripes
ENSRNOG00000005258	Myef2	95	64.685	ENSTNIG00000009526	myef2	96	66.900	Tetraodon_nigroviridis
ENSRNOG00000005258	Myef2	72	88.506	ENSTBEG00000002187	MYEF2	72	88.506	Tupaia_belangeri
ENSRNOG00000005258	Myef2	98	92.530	ENSTTRG00000008076	MYEF2	99	92.530	Tursiops_truncatus
ENSRNOG00000005258	Myef2	100	83.279	ENSUAMG00000020099	MYEF2	100	84.959	Ursus_americanus
ENSRNOG00000005258	Myef2	98	86.031	ENSUMAG00000009804	MYEF2	99	89.209	Ursus_maritimus
ENSRNOG00000005258	Myef2	92	95.238	ENSVPAG00000004721	MYEF2	100	95.238	Vicugna_pacos
ENSRNOG00000005258	Myef2	97	84.201	ENSVVUG00000014591	MYEF2	99	83.721	Vulpes_vulpes
ENSRNOG00000005258	Myef2	93	66.333	ENSXETG00000018412	myef2	95	67.333	Xenopus_tropicalis
ENSRNOG00000005258	Myef2	99	59.060	ENSXMAG00000016686	myef2	99	60.134	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	IEA	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0003697	single-stranded DNA binding	-	IEA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0014902	myotube differentiation	-	ISO	Process
GO:0030182	neuron differentiation	-	ISO	Process
GO:0071014	post-mRNA release spliceosomal complex	21873635.	IBA	Component
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component
GO:2000815	regulation of mRNA stability involved in response to oxidative stress	21873635.	IBA	Process