EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000005269 (Gene tree)
Gene ID: 302948
Gene Symbol: Srl
Alias: LOC302948
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 44195 bases
Position: chr10:11240138-11284332
Accession: 1306564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000039064	MMR_HSR1	PF01926.23	4e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000048687	-	5067	XM_003750771	ENSRNOP00000039064	904 (aa)	XP_003750819	F1LWG8

Gene Model

Click here to download ENSRNOG00000005269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000005269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000005269	Srl	50	96.247	ENSG00000185739	SRL	100	96.984	Homo_sapiens
ENSRNOG00000005269	Srl	50	82.895	ENSAPOG00000018093	srl	100	84.009	Acanthochromis_polyacanthus
ENSRNOG00000005269	Srl	98	67.728	ENSAMEG00000010862	SRL	100	67.728	Ailuropoda_melanoleuca
ENSRNOG00000005269	Srl	50	83.664	ENSACIG00000015799	srl	100	83.664	Amphilophus_citrinellus
ENSRNOG00000005269	Srl	50	83.114	ENSAPEG00000006911	srl	96	83.114	Amphiprion_percula
ENSRNOG00000005269	Srl	50	83.333	ENSACLG00000027685	srl	98	83.333	Astatotilapia_calliptera
ENSRNOG00000005269	Srl	80	94.268	ENSBTAG00000001078	SRL	74	79.775	Bos_taurus
ENSRNOG00000005269	Srl	50	96.468	ENSCJAG00000019750	SRL	96	96.468	Callithrix_jacchus
ENSRNOG00000005269	Srl	51	97.168	ENSCAFG00000019233	SRL	85	97.168	Canis_familiaris
ENSRNOG00000005269	Srl	100	71.302	ENSCAFG00020025024	SRL	98	71.445	Canis_lupus_dingo
ENSRNOG00000005269	Srl	79	95.106	ENSCHIG00000017927	SRL	98	66.029	Capra_hircus
ENSRNOG00000005269	Srl	50	97.792	ENSTSYG00000007919	SRL	100	97.912	Carlito_syrichta
ENSRNOG00000005269	Srl	51	96.943	ENSCPOG00000012643	SRL	97	96.943	Cavia_porcellus
ENSRNOG00000005269	Srl	50	90.287	ENSCCAG00000032646	SRL	100	96.834	Cebus_capucinus
ENSRNOG00000005269	Srl	100	67.470	ENSCATG00000032227	-	96	96.247	Cercocebus_atys
ENSRNOG00000005269	Srl	51	97.162	ENSCLAG00000016242	SRL	97	97.162	Chinchilla_lanigera
ENSRNOG00000005269	Srl	100	67.411	ENSCSAG00000009635	-	98	67.559	Chlorocebus_sabaeus
ENSRNOG00000005269	Srl	72	96.364	ENSCHOG00000001618	SRL	73	96.364	Choloepus_hoffmanni
ENSRNOG00000005269	Srl	59	93.299	ENSCPBG00000026371	SRL	97	88.699	Chrysemys_picta_bellii
ENSRNOG00000005269	Srl	50	96.247	ENSCANG00000035872	SRL	100	96.984	Colobus_angolensis_palliatus
ENSRNOG00000005269	Srl	98	81.292	ENSCGRG00001016630	Srl	97	97.162	Cricetulus_griseus_chok1gshd
ENSRNOG00000005269	Srl	98	81.292	ENSCGRG00000005458	Srl	97	97.162	Cricetulus_griseus_crigri
ENSRNOG00000005269	Srl	51	82.713	ENSCSEG00000016151	srl	97	82.713	Cynoglossus_semilaevis
ENSRNOG00000005269	Srl	50	72.185	ENSCSEG00000011866	SRL	91	72.406	Cynoglossus_semilaevis
ENSRNOG00000005269	Srl	51	83.007	ENSDARG00000104587	srl	98	83.007	Danio_rerio
ENSRNOG00000005269	Srl	100	71.053	ENSDNOG00000011643	SRL	98	68.939	Dasypus_novemcinctus
ENSRNOG00000005269	Srl	51	97.380	ENSDORG00000014807	Srl	97	97.380	Dipodomys_ordii
ENSRNOG00000005269	Srl	99	70.806	ENSEASG00005000942	SRL	98	70.144	Equus_asinus_asinus
ENSRNOG00000005269	Srl	99	68.612	ENSECAG00000024219	SRL	96	96.681	Equus_caballus
ENSRNOG00000005269	Srl	51	79.493	ENSELUG00000015616	srl	97	79.493	Esox_lucius
ENSRNOG00000005269	Srl	100	69.372	ENSFCAG00000022075	SRL	96	97.572	Felis_catus
ENSRNOG00000005269	Srl	51	88.793	ENSFALG00000004328	SRL	65	88.793	Ficedula_albicollis
ENSRNOG00000005269	Srl	51	97.162	ENSFDAG00000006199	SRL	97	97.162	Fukomys_damarensis
ENSRNOG00000005269	Srl	50	91.372	ENSGALG00000038884	SRL	97	90.372	Gallus_gallus
ENSRNOG00000005269	Srl	51	81.838	ENSGAFG00000000010	srl	99	81.838	Gambusia_affinis
ENSRNOG00000005269	Srl	99	66.905	ENSGGOG00000011312	-	96	96.247	Gorilla_gorilla
ENSRNOG00000005269	Srl	50	83.333	ENSHBUG00000007581	srl	98	83.333	Haplochromis_burtoni
ENSRNOG00000005269	Srl	51	97.162	ENSHGLG00000015271	SRL	97	97.162	Heterocephalus_glaber_female
ENSRNOG00000005269	Srl	51	97.162	ENSHGLG00100019378	SRL	97	97.162	Heterocephalus_glaber_male
ENSRNOG00000005269	Srl	50	82.456	ENSHCOG00000008687	srl	98	83.937	Hippocampus_comes
ENSRNOG00000005269	Srl	59	64.130	ENSHCOG00000001012	SRL	59	64.130	Hippocampus_comes
ENSRNOG00000005269	Srl	51	80.525	ENSIPUG00000012513	srl	97	80.525	Ictalurus_punctatus
ENSRNOG00000005269	Srl	98	78.399	ENSSTOG00000021151	-	97	96.943	Ictidomys_tridecemlineatus
ENSRNOG00000005269	Srl	51	97.162	ENSJJAG00000016400	Srl	97	97.162	Jaculus_jaculus
ENSRNOG00000005269	Srl	50	82.589	ENSKMAG00000014115	srl	93	86.223	Kryptolebias_marmoratus
ENSRNOG00000005269	Srl	50	82.743	ENSLBEG00000026643	srl	96	82.743	Labrus_bergylta
ENSRNOG00000005269	Srl	50	86.976	ENSLACG00000002825	SRL	100	86.976	Latimeria_chalumnae
ENSRNOG00000005269	Srl	50	84.547	ENSLOCG00000002644	srl	96	84.547	Lepisosteus_oculatus
ENSRNOG00000005269	Srl	98	71.732	ENSLAFG00000006329	SRL	98	72.072	Loxodonta_africana
ENSRNOG00000005269	Srl	100	81.742	ENSMNEG00000019236	-	97	94.978	Macaca_nemestrina
ENSRNOG00000005269	Srl	50	88.079	ENSMLEG00000032156	SRL	95	88.079	Mandrillus_leucophaeus
ENSRNOG00000005269	Srl	50	83.333	ENSMZEG00005004548	srl	98	83.333	Maylandia_zebra
ENSRNOG00000005269	Srl	61	77.836	ENSMGAG00000009342	SRL	95	92.838	Meleagris_gallopavo
ENSRNOG00000005269	Srl	98	69.944	ENSMICG00000032307	SRL	96	96.247	Microcebus_murinus
ENSRNOG00000005269	Srl	51	96.943	ENSMOCG00000008208	Srl	97	96.943	Microtus_ochrogaster
ENSRNOG00000005269	Srl	99	63.675	ENSMODG00000016380	-	69	79.653	Monodelphis_domestica
ENSRNOG00000005269	Srl	98	89.123	MGP_CAROLIEiJ_G0020400	Srl	97	97.817	Mus_caroli
ENSRNOG00000005269	Srl	98	89.456	ENSMUSG00000022519	Srl	97	97.817	Mus_musculus
ENSRNOG00000005269	Srl	98	88.938	MGP_PahariEiJ_G0016108	Srl	98	88.487	Mus_pahari
ENSRNOG00000005269	Srl	98	89.123	MGP_SPRETEiJ_G0021294	Srl	97	97.817	Mus_spretus
ENSRNOG00000005269	Srl	100	70.939	ENSMPUG00000015025	SRL	74	84.168	Mustela_putorius_furo
ENSRNOG00000005269	Srl	98	70.964	ENSMLUG00000030733	SRL	77	80.930	Myotis_lucifugus
ENSRNOG00000005269	Srl	51	97.162	ENSNGAG00000019741	Srl	97	97.162	Nannospalax_galili
ENSRNOG00000005269	Srl	50	83.223	ENSNBRG00000023775	srl	97	82.895	Neolamprologus_brichardi
ENSRNOG00000005269	Srl	56	65.962	ENSNBRG00000002422	SRL	56	74.419	Neolamprologus_brichardi
ENSRNOG00000005269	Srl	50	89.381	ENSNLEG00000029051	SRL	95	89.381	Nomascus_leucogenys
ENSRNOG00000005269	Srl	55	86.492	ENSOPRG00000000477	-	98	68.681	Ochotona_princeps
ENSRNOG00000005269	Srl	51	96.288	ENSODEG00000013256	SRL	97	96.288	Octodon_degus
ENSRNOG00000005269	Srl	50	82.781	ENSONIG00000005192	srl	96	82.781	Oreochromis_niloticus
ENSRNOG00000005269	Srl	100	74.596	ENSOCUG00000025140	SRL	98	74.699	Oryctolagus_cuniculus
ENSRNOG00000005269	Srl	76	54.834	ENSORLG00000015064	SRL	99	73.742	Oryzias_latipes
ENSRNOG00000005269	Srl	50	81.718	ENSORLG00000008291	srl	91	85.530	Oryzias_latipes
ENSRNOG00000005269	Srl	50	81.938	ENSORLG00020019784	srl	79	85.788	Oryzias_latipes_hni
ENSRNOG00000005269	Srl	51	73.961	ENSORLG00020018173	SRL	99	73.961	Oryzias_latipes_hni
ENSRNOG00000005269	Srl	51	74.179	ENSORLG00015019063	SRL	99	74.179	Oryzias_latipes_hsok
ENSRNOG00000005269	Srl	50	81.498	ENSORLG00015009342	srl	94	80.786	Oryzias_latipes_hsok
ENSRNOG00000005269	Srl	50	81.718	ENSOMEG00000010006	srl	98	83.409	Oryzias_melastigma
ENSRNOG00000005269	Srl	98	69.527	ENSOGAG00000029266	SRL	100	70.077	Otolemur_garnettii
ENSRNOG00000005269	Srl	63	96.061	ENSOARG00000003074	SRL	75	96.061	Ovis_aries
ENSRNOG00000005269	Srl	98	69.881	ENSPPAG00000024919	-	100	96.984	Pan_paniscus
ENSRNOG00000005269	Srl	50	97.792	ENSPPRG00000010274	SRL	100	98.144	Panthera_pardus
ENSRNOG00000005269	Srl	50	97.792	ENSPTIG00000015162	SRL	100	98.144	Panthera_tigris_altaica
ENSRNOG00000005269	Srl	99	69.223	ENSPTRG00000007712	SRL	100	96.984	Pan_troglodytes
ENSRNOG00000005269	Srl	51	95.197	ENSPANG00000013804	SRL	98	95.197	Papio_anubis
ENSRNOG00000005269	Srl	51	82.353	ENSPKIG00000006405	srl	97	82.353	Paramormyrops_kingsleyae
ENSRNOG00000005269	Srl	98	58.550	ENSPSIG00000008586	SRL	51	90.022	Pelodiscus_sinensis
ENSRNOG00000005269	Srl	50	83.186	ENSPMGG00000021081	srl	97	83.186	Periophthalmus_magnuspinnatus
ENSRNOG00000005269	Srl	51	97.598	ENSPEMG00000015842	Srl	97	97.598	Peromyscus_maniculatus_bairdii
ENSRNOG00000005269	Srl	50	96.681	ENSPCIG00000012128	SRL	99	96.681	Phascolarctos_cinereus
ENSRNOG00000005269	Srl	51	80.000	ENSPFOG00000011408	srl	97	80.000	Poecilia_formosa
ENSRNOG00000005269	Srl	50	82.965	ENSPLAG00000008017	srl	98	82.965	Poecilia_latipinna
ENSRNOG00000005269	Srl	50	82.965	ENSPMEG00000006745	srl	98	82.965	Poecilia_mexicana
ENSRNOG00000005269	Srl	50	82.379	ENSPREG00000007751	srl	99	83.371	Poecilia_reticulata
ENSRNOG00000005269	Srl	79	90.726	ENSPCAG00000003378	-	89	90.726	Procavia_capensis
ENSRNOG00000005269	Srl	50	96.468	ENSPCOG00000023135	SRL	100	97.216	Propithecus_coquereli
ENSRNOG00000005269	Srl	100	69.813	ENSPVAG00000006586	SRL	75	79.507	Pteropus_vampyrus
ENSRNOG00000005269	Srl	50	83.333	ENSPNYG00000001200	srl	98	83.333	Pundamilia_nyererei
ENSRNOG00000005269	Srl	100	69.127	ENSRBIG00000042358	SRL	76	76.580	Rhinopithecus_bieti
ENSRNOG00000005269	Srl	100	70.390	ENSSBOG00000029273	SRL	96	96.468	Saimiri_boliviensis_boliviensis
ENSRNOG00000005269	Srl	98	64.554	ENSSHAG00000011715	-	70	79.621	Sarcophilus_harrisii
ENSRNOG00000005269	Srl	51	82.276	ENSSMAG00000016274	srl	99	82.276	Scophthalmus_maximus
ENSRNOG00000005269	Srl	50	83.040	ENSSLDG00000022024	srl	95	84.615	Seriola_lalandi_dorsalis
ENSRNOG00000005269	Srl	50	91.170	ENSSPUG00000016859	SRL	99	91.170	Sphenodon_punctatus
ENSRNOG00000005269	Srl	50	83.480	ENSSPAG00000019105	srl	96	83.480	Stegastes_partitus
ENSRNOG00000005269	Srl	99	69.138	ENSSSCG00000007949	SRL	99	96.429	Sus_scrofa
ENSRNOG00000005269	Srl	50	90.708	ENSTGUG00000003951	-	99	90.708	Taeniopygia_guttata
ENSRNOG00000005269	Srl	51	82.096	ENSTRUG00000006005	srl	97	82.096	Takifugu_rubripes
ENSRNOG00000005269	Srl	50	82.599	ENSTNIG00000009739	srl	97	82.599	Tetraodon_nigroviridis
ENSRNOG00000005269	Srl	70	96.591	ENSTTRG00000002709	-	66	96.591	Tursiops_truncatus
ENSRNOG00000005269	Srl	99	70.968	ENSUAMG00000005701	SRL	98	71.154	Ursus_americanus
ENSRNOG00000005269	Srl	99	70.444	ENSUMAG00000002574	SRL	98	70.833	Ursus_maritimus
ENSRNOG00000005269	Srl	78	84.127	ENSVVUG00000016331	-	87	71.864	Vulpes_vulpes
ENSRNOG00000005269	Srl	50	89.159	ENSXETG00000017313	srl	100	89.159	Xenopus_tropicalis
ENSRNOG00000005269	Srl	50	82.379	ENSXMAG00000004625	srl	93	81.659	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002115	store-operated calcium entry	-	IEA	Process
GO:0002115	store-operated calcium entry	-	ISO	Process
GO:0005525	GTP binding	-	IEA	Function
GO:0014873	response to muscle activity involved in regulation of muscle adaptation	-	IEA	Process
GO:0014873	response to muscle activity involved in regulation of muscle adaptation	-	ISO	Process