EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000005426 (Gene tree)
Gene ID: 316108
Gene Symbol: Snupn
Alias: MGC95000|Rnut1
Full Name: snurportin 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 32741 bases
Position: chr8:61615650-61648390
Accession: 1303191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000007261	Snurportin1	PF11538.8	3.3e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000007261	-	1333	XM_006243124	ENSRNOP00000007261	358 (aa)	XP_006243186	Q68FP5

Gene Model

Click here to download ENSRNOG00000005426's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000005426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000005426	Snupn	99	92.655	ENSG00000169371	SNUPN	100	96.825	Homo_sapiens
ENSRNOG00000005426	Snupn	96	66.573	ENSAPOG00000016953	snupn	94	66.011	Acanthochromis_polyacanthus
ENSRNOG00000005426	Snupn	100	92.798	ENSAMEG00000008291	SNUPN	99	92.798	Ailuropoda_melanoleuca
ENSRNOG00000005426	Snupn	96	65.449	ENSACIG00000012409	snupn	94	64.326	Amphilophus_citrinellus
ENSRNOG00000005426	Snupn	96	66.292	ENSAOCG00000018096	snupn	94	65.730	Amphiprion_ocellaris
ENSRNOG00000005426	Snupn	96	66.292	ENSAPEG00000008834	snupn	94	65.449	Amphiprion_percula
ENSRNOG00000005426	Snupn	96	66.854	ENSATEG00000021019	snupn	94	65.634	Anabas_testudineus
ENSRNOG00000005426	Snupn	100	90.582	ENSANAG00000025568	SNUPN	100	90.582	Aotus_nancymaae
ENSRNOG00000005426	Snupn	96	64.225	ENSACLG00000025155	snupn	94	64.507	Astatotilapia_calliptera
ENSRNOG00000005426	Snupn	100	64.130	ENSAMXG00000038311	snupn	100	63.859	Astyanax_mexicanus
ENSRNOG00000005426	Snupn	100	88.950	ENSBTAG00000021293	SNUPN	100	88.950	Bos_taurus
ENSRNOG00000005426	Snupn	87	42.357	WBGene00017746	F23F1.5	93	42.357	Caenorhabditis_elegans
ENSRNOG00000005426	Snupn	100	90.859	ENSCJAG00000003005	SNUPN	100	90.859	Callithrix_jacchus
ENSRNOG00000005426	Snupn	100	91.136	ENSCAFG00000018035	SNUPN	100	91.136	Canis_familiaris
ENSRNOG00000005426	Snupn	100	89.227	ENSCHIG00000018047	SNUPN	100	89.227	Capra_hircus
ENSRNOG00000005426	Snupn	99	88.418	ENSTSYG00000037224	SNUPN	98	88.418	Carlito_syrichta
ENSRNOG00000005426	Snupn	96	76.676	ENSCAPG00000005061	SNUPN	95	76.676	Cavia_aperea
ENSRNOG00000005426	Snupn	96	90.962	ENSCPOG00000034772	SNUPN	95	90.962	Cavia_porcellus
ENSRNOG00000005426	Snupn	100	90.859	ENSCCAG00000016169	-	100	90.859	Cebus_capucinus
ENSRNOG00000005426	Snupn	100	91.713	ENSCATG00000039783	SNUPN	100	91.713	Cercocebus_atys
ENSRNOG00000005426	Snupn	96	90.936	ENSCLAG00000016968	SNUPN	97	89.714	Chinchilla_lanigera
ENSRNOG00000005426	Snupn	100	90.055	ENSCSAG00000019246	-	100	90.055	Chlorocebus_sabaeus
ENSRNOG00000005426	Snupn	100	91.160	ENSCSAG00000014576	-	89	91.160	Chlorocebus_sabaeus
ENSRNOG00000005426	Snupn	97	70.774	ENSCHOG00000005403	SNUPN	96	70.774	Choloepus_hoffmanni
ENSRNOG00000005426	Snupn	98	80.226	ENSCPBG00000022172	SNUPN	93	80.226	Chrysemys_picta_bellii
ENSRNOG00000005426	Snupn	100	91.436	ENSCANG00000029707	SNUPN	100	91.436	Colobus_angolensis_palliatus
ENSRNOG00000005426	Snupn	100	94.972	ENSCGRG00001004622	Snupn	100	94.693	Cricetulus_griseus_chok1gshd
ENSRNOG00000005426	Snupn	100	94.972	ENSCGRG00000002515	Snupn	100	94.693	Cricetulus_griseus_crigri
ENSRNOG00000005426	Snupn	96	63.764	ENSCSEG00000003160	snupn	84	62.185	Cynoglossus_semilaevis
ENSRNOG00000005426	Snupn	96	64.689	ENSCVAG00000010502	snupn	94	64.689	Cyprinodon_variegatus
ENSRNOG00000005426	Snupn	96	64.972	ENSDARG00000008395	snupn	96	64.407	Danio_rerio
ENSRNOG00000005426	Snupn	97	89.112	ENSDNOG00000044304	SNUPN	91	89.112	Dasypus_novemcinctus
ENSRNOG00000005426	Snupn	100	91.436	ENSDORG00000009051	Snupn	100	91.436	Dipodomys_ordii
ENSRNOG00000005426	Snupn	100	74.309	ENSETEG00000013792	SNUPN	100	74.309	Echinops_telfairi
ENSRNOG00000005426	Snupn	96	54.085	ENSEBUG00000006682	snupn	93	54.366	Eptatretus_burgeri
ENSRNOG00000005426	Snupn	100	92.541	ENSEASG00005015697	SNUPN	97	92.541	Equus_asinus_asinus
ENSRNOG00000005426	Snupn	100	92.541	ENSECAG00000017726	SNUPN	100	92.541	Equus_caballus
ENSRNOG00000005426	Snupn	68	91.716	ENSEEUG00000000981	-	67	91.716	Erinaceus_europaeus
ENSRNOG00000005426	Snupn	96	65.507	ENSELUG00000023305	snupn	93	65.698	Esox_lucius
ENSRNOG00000005426	Snupn	100	91.136	ENSFCAG00000040981	SNUPN	97	93.143	Felis_catus
ENSRNOG00000005426	Snupn	98	89.489	ENSFDAG00000011599	SNUPN	98	89.744	Fukomys_damarensis
ENSRNOG00000005426	Snupn	96	65.169	ENSFHEG00000017627	snupn	94	64.507	Fundulus_heteroclitus
ENSRNOG00000005426	Snupn	96	62.712	ENSGMOG00000009272	snupn	100	63.662	Gadus_morhua
ENSRNOG00000005426	Snupn	91	72.508	ENSGALG00000029537	SNUPN	95	71.347	Gallus_gallus
ENSRNOG00000005426	Snupn	97	65.642	ENSGAFG00000004954	snupn	95	64.624	Gambusia_affinis
ENSRNOG00000005426	Snupn	99	65.363	ENSGACG00000007450	snupn	100	66.102	Gasterosteus_aculeatus
ENSRNOG00000005426	Snupn	96	80.516	ENSGAGG00000022470	SNUPN	95	80.229	Gopherus_agassizii
ENSRNOG00000005426	Snupn	62	90.066	ENSGGOG00000004581	-	95	90.066	Gorilla_gorilla
ENSRNOG00000005426	Snupn	96	65.634	ENSHBUG00000006950	snupn	94	64.789	Haplochromis_burtoni
ENSRNOG00000005426	Snupn	98	89.744	ENSHGLG00000000536	SNUPN	98	89.744	Heterocephalus_glaber_female
ENSRNOG00000005426	Snupn	98	89.744	ENSHGLG00100016161	SNUPN	98	89.744	Heterocephalus_glaber_male
ENSRNOG00000005426	Snupn	96	65.556	ENSHCOG00000007262	snupn	95	65.278	Hippocampus_comes
ENSRNOG00000005426	Snupn	100	62.500	ENSIPUG00000014460	Snupn	100	63.043	Ictalurus_punctatus
ENSRNOG00000005426	Snupn	100	90.582	ENSSTOG00000005904	SNUPN	100	90.582	Ictidomys_tridecemlineatus
ENSRNOG00000005426	Snupn	96	62.784	ENSKMAG00000009957	snupn	93	63.173	Kryptolebias_marmoratus
ENSRNOG00000005426	Snupn	96	65.556	ENSLBEG00000020694	snupn	94	64.820	Labrus_bergylta
ENSRNOG00000005426	Snupn	96	70.317	ENSLACG00000015801	SNUPN	96	70.317	Latimeria_chalumnae
ENSRNOG00000005426	Snupn	96	67.429	ENSLOCG00000015064	snupn	95	66.571	Lepisosteus_oculatus
ENSRNOG00000005426	Snupn	100	91.713	ENSLAFG00000004422	SNUPN	100	91.713	Loxodonta_africana
ENSRNOG00000005426	Snupn	88	88.718	ENSMFAG00000003706	SNUPN	100	88.718	Macaca_fascicularis
ENSRNOG00000005426	Snupn	100	91.989	ENSMMUG00000004784	SNUPN	100	91.989	Macaca_mulatta
ENSRNOG00000005426	Snupn	100	83.702	ENSMLEG00000041966	SNUPN	100	83.702	Mandrillus_leucophaeus
ENSRNOG00000005426	Snupn	96	67.697	ENSMAMG00000023109	snupn	94	66.292	Mastacembelus_armatus
ENSRNOG00000005426	Snupn	96	64.507	ENSMZEG00005010806	snupn	94	64.789	Maylandia_zebra
ENSRNOG00000005426	Snupn	100	95.251	ENSMAUG00000020426	Snupn	100	94.972	Mesocricetus_auratus
ENSRNOG00000005426	Snupn	99	93.220	ENSMICG00000016438	SNUPN	98	93.220	Microcebus_murinus
ENSRNOG00000005426	Snupn	100	95.251	ENSMOCG00000014238	Snupn	100	95.251	Microtus_ochrogaster
ENSRNOG00000005426	Snupn	96	66.197	ENSMMOG00000001321	snupn	94	66.197	Mola_mola
ENSRNOG00000005426	Snupn	100	82.016	ENSMODG00000008852	SNUPN	100	82.016	Monodelphis_domestica
ENSRNOG00000005426	Snupn	96	67.045	ENSMALG00000015058	snupn	94	67.045	Monopterus_albus
ENSRNOG00000005426	Snupn	100	97.765	MGP_CAROLIEiJ_G0032259	Snupn	100	97.765	Mus_caroli
ENSRNOG00000005426	Snupn	100	97.765	ENSMUSG00000055334	Snupn	100	97.765	Mus_musculus
ENSRNOG00000005426	Snupn	100	98.603	MGP_PahariEiJ_G0015126	Snupn	100	98.603	Mus_pahari
ENSRNOG00000005426	Snupn	100	97.765	MGP_SPRETEiJ_G0033399	Snupn	100	97.765	Mus_spretus
ENSRNOG00000005426	Snupn	100	90.582	ENSMPUG00000017324	SNUPN	100	90.582	Mustela_putorius_furo
ENSRNOG00000005426	Snupn	99	85.434	ENSMLUG00000027485	-	98	85.434	Myotis_lucifugus
ENSRNOG00000005426	Snupn	99	75.758	ENSMLUG00000000038	-	100	76.657	Myotis_lucifugus
ENSRNOG00000005426	Snupn	99	90.476	ENSMLUG00000027517	-	98	90.476	Myotis_lucifugus
ENSRNOG00000005426	Snupn	100	90.859	ENSNGAG00000018735	Snupn	100	92.798	Nannospalax_galili
ENSRNOG00000005426	Snupn	100	64.054	ENSNBRG00000017919	snupn	97	63.514	Neolamprologus_brichardi
ENSRNOG00000005426	Snupn	100	62.810	ENSNLEG00000035240	-	100	62.810	Nomascus_leucogenys
ENSRNOG00000005426	Snupn	99	72.676	ENSOPRG00000015889	-	98	72.676	Ochotona_princeps
ENSRNOG00000005426	Snupn	90	77.570	ENSODEG00000014491	SNUPN	96	76.596	Octodon_degus
ENSRNOG00000005426	Snupn	96	66.479	ENSONIG00000012855	snupn	96	65.915	Oreochromis_niloticus
ENSRNOG00000005426	Snupn	97	89.714	ENSOCUG00000008801	SNUPN	97	90.571	Oryctolagus_cuniculus
ENSRNOG00000005426	Snupn	97	65.738	ENSORLG00000001836	snupn	95	65.833	Oryzias_latipes
ENSRNOG00000005426	Snupn	97	66.389	ENSORLG00020021175	snupn	95	65.556	Oryzias_latipes_hni
ENSRNOG00000005426	Snupn	97	66.667	ENSORLG00015014444	snupn	94	66.111	Oryzias_latipes_hsok
ENSRNOG00000005426	Snupn	97	69.429	ENSOMEG00000004853	snupn	95	68.286	Oryzias_melastigma
ENSRNOG00000005426	Snupn	100	88.398	ENSOGAG00000004915	SNUPN	100	88.398	Otolemur_garnettii
ENSRNOG00000005426	Snupn	100	89.503	ENSOARG00000001991	SNUPN	97	89.503	Ovis_aries
ENSRNOG00000005426	Snupn	98	93.182	ENSPPAG00000034351	SNUPN	97	93.182	Pan_paniscus
ENSRNOG00000005426	Snupn	100	91.413	ENSPPRG00000023192	SNUPN	100	91.413	Panthera_pardus
ENSRNOG00000005426	Snupn	100	91.413	ENSPTIG00000003528	SNUPN	100	91.413	Panthera_tigris_altaica
ENSRNOG00000005426	Snupn	98	93.466	ENSPTRG00000007302	SNUPN	97	93.466	Pan_troglodytes
ENSRNOG00000005426	Snupn	100	82.044	ENSPANG00000034514	SNUPN	100	82.044	Papio_anubis
ENSRNOG00000005426	Snupn	96	65.507	ENSPKIG00000012444	snupn	96	65.797	Paramormyrops_kingsleyae
ENSRNOG00000005426	Snupn	98	80.000	ENSPSIG00000015229	SNUPN	97	80.000	Pelodiscus_sinensis
ENSRNOG00000005426	Snupn	97	64.110	ENSPMGG00000023843	snupn	96	64.208	Periophthalmus_magnuspinnatus
ENSRNOG00000005426	Snupn	100	82.825	ENSPCIG00000007854	SNUPN	100	82.825	Phascolarctos_cinereus
ENSRNOG00000005426	Snupn	97	64.986	ENSPFOG00000014221	snupn	94	64.804	Poecilia_formosa
ENSRNOG00000005426	Snupn	97	64.706	ENSPLAG00000002339	snupn	94	65.084	Poecilia_latipinna
ENSRNOG00000005426	Snupn	97	64.986	ENSPMEG00000012436	snupn	94	64.804	Poecilia_mexicana
ENSRNOG00000005426	Snupn	97	64.986	ENSPREG00000012683	snupn	94	65.084	Poecilia_reticulata
ENSRNOG00000005426	Snupn	98	83.523	ENSPPYG00000006663	SNUPN	97	83.523	Pongo_abelii
ENSRNOG00000005426	Snupn	100	91.136	ENSPCOG00000025482	SNUPN	100	91.136	Propithecus_coquereli
ENSRNOG00000005426	Snupn	96	91.837	ENSPVAG00000010035	SNUPN	100	89.779	Pteropus_vampyrus
ENSRNOG00000005426	Snupn	96	65.634	ENSPNYG00000008752	snupn	94	64.789	Pundamilia_nyererei
ENSRNOG00000005426	Snupn	96	67.330	ENSPNAG00000026875	snupn	96	66.477	Pygocentrus_nattereri
ENSRNOG00000005426	Snupn	100	91.989	ENSRBIG00000038665	SNUPN	100	91.989	Rhinopithecus_bieti
ENSRNOG00000005426	Snupn	100	92.265	ENSRROG00000043625	SNUPN	100	92.265	Rhinopithecus_roxellana
ENSRNOG00000005426	Snupn	99	91.501	ENSSBOG00000029086	-	97	92.023	Saimiri_boliviensis_boliviensis
ENSRNOG00000005426	Snupn	88	71.069	ENSSFOG00015022264	snupn	65	70.755	Scleropages_formosus
ENSRNOG00000005426	Snupn	96	69.477	ENSSMAG00000005485	snupn	94	69.477	Scophthalmus_maximus
ENSRNOG00000005426	Snupn	96	67.606	ENSSDUG00000023461	snupn	94	66.292	Seriola_dumerili
ENSRNOG00000005426	Snupn	96	67.797	ENSSLDG00000001425	snupn	94	66.479	Seriola_lalandi_dorsalis
ENSRNOG00000005426	Snupn	98	73.088	ENSSARG00000005585	SNUPN	96	73.088	Sorex_araneus
ENSRNOG00000005426	Snupn	97	75.487	ENSSPUG00000014331	SNUPN	97	75.487	Sphenodon_punctatus
ENSRNOG00000005426	Snupn	96	66.573	ENSSPAG00000001216	snupn	94	65.730	Stegastes_partitus
ENSRNOG00000005426	Snupn	100	92.265	ENSSSCG00000001877	SNUPN	100	92.265	Sus_scrofa
ENSRNOG00000005426	Snupn	96	67.042	ENSTRUG00000016085	snupn	92	65.730	Takifugu_rubripes
ENSRNOG00000005426	Snupn	95	58.739	ENSTNIG00000008456	snupn	100	59.312	Tetraodon_nigroviridis
ENSRNOG00000005426	Snupn	97	87.143	ENSTBEG00000002434	SNUPN	97	87.143	Tupaia_belangeri
ENSRNOG00000005426	Snupn	100	84.530	ENSTTRG00000011484	SNUPN	100	84.530	Tursiops_truncatus
ENSRNOG00000005426	Snupn	100	92.798	ENSUAMG00000022723	SNUPN	100	92.798	Ursus_americanus
ENSRNOG00000005426	Snupn	100	92.521	ENSUMAG00000003738	SNUPN	100	92.521	Ursus_maritimus
ENSRNOG00000005426	Snupn	100	90.859	ENSVVUG00000019574	SNUPN	100	90.859	Vulpes_vulpes
ENSRNOG00000005426	Snupn	96	68.103	ENSXETG00000015280	snupn	99	67.816	Xenopus_tropicalis
ENSRNOG00000005426	Snupn	97	65.266	ENSXMAG00000006634	snupn	95	65.084	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000339	RNA cap binding	10209022.	TAS	Function
GO:0005643	nuclear pore	10209022.	TAS	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005846	nuclear cap binding complex	10209022.	TAS	Component
GO:0006606	protein import into nucleus	-	IEA	Process
GO:0061015	snRNA import into nucleus	-	IEA	Process
GO:0061608	nuclear import signal receptor activity	-	IEA	Function