EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000005430 (Gene tree)
Gene ID: -
Gene Symbol: AABR07040944.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 475 bases
Position: chrX:115375018-115375492
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000007194	Ribosomal_S19e	PF01090.19	1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000007194	AABR07040944.1-201	453	-	ENSRNOP00000007194	150 (aa)	-	F1M764

Gene Model

Click here to download ENSRNOG00000005430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000005430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000005430	AABR07040944.1	96	95.172	ENSRNOG00000037897	Rps19	100	95.172
ENSRNOG00000005430	AABR07040944.1	100	94.040	ENSRNOG00000048199	Rps19l2	96	94.040
ENSRNOG00000005430	AABR07040944.1	86	90.000	ENSRNOG00000009861	AABR07028859.1	88	90.000
ENSRNOG00000005430	AABR07040944.1	96	94.483	ENSRNOG00000018471	LOC100362339	100	94.483
ENSRNOG00000005430	AABR07040944.1	95	90.476	ENSRNOG00000033146	LOC103690015	97	90.476
ENSRNOG00000005430	AABR07040944.1	91	78.261	ENSRNOG00000034203	AABR07064312.1	91	78.261
ENSRNOG00000005430	AABR07040944.1	100	91.391	ENSRNOG00000032482	AABR07029006.1	100	91.391
ENSRNOG00000005430	AABR07040944.1	98	90.789	ENSRNOG00000031474	AABR07058360.1	97	90.789
ENSRNOG00000005430	AABR07040944.1	99	87.333	ENSRNOG00000013292	AC117101.1	100	87.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000005430	AABR07040944.1	99	63.087	ENSCAFG00000032295	-	100	63.087	Canis_familiaris
ENSRNOG00000005430	AABR07040944.1	95	58.333	ENSCHIG00000026870	-	97	58.333	Capra_hircus
ENSRNOG00000005430	AABR07040944.1	96	71.724	ENSTSYG00000032713	-	100	71.724	Carlito_syrichta
ENSRNOG00000005430	AABR07040944.1	96	64.828	ENSTSYG00000035711	-	100	64.828	Carlito_syrichta
ENSRNOG00000005430	AABR07040944.1	96	64.138	ENSCGRG00001014804	-	100	64.138	Cricetulus_griseus_chok1gshd
ENSRNOG00000005430	AABR07040944.1	96	64.138	ENSCGRG00000010731	-	100	64.138	Cricetulus_griseus_crigri
ENSRNOG00000005430	AABR07040944.1	91	64.493	FBgn0010412	RpS19a	88	64.493	Drosophila_melanogaster
ENSRNOG00000005430	AABR07040944.1	96	59.310	ENSEBUG00000008731	-	100	59.310	Eptatretus_burgeri
ENSRNOG00000005430	AABR07040944.1	95	50.350	ENSNLEG00000027781	-	99	50.350	Nomascus_leucogenys
ENSRNOG00000005430	AABR07040944.1	96	79.310	ENSPPAG00000041345	-	81	81.250	Pan_paniscus
ENSRNOG00000005430	AABR07040944.1	96	64.828	ENSPTRG00000048711	-	100	64.828	Pan_troglodytes
ENSRNOG00000005430	AABR07040944.1	96	83.448	ENSPANG00000032511	-	100	83.448	Papio_anubis
ENSRNOG00000005430	AABR07040944.1	94	80.986	ENSRBIG00000031897	-	98	80.986	Rhinopithecus_bieti
ENSRNOG00000005430	AABR07040944.1	96	56.250	ENSSSCG00000033621	-	100	56.250	Sus_scrofa
ENSRNOG00000005430	AABR07040944.1	96	54.362	ENSUMAG00000017013	-	100	54.362	Ursus_maritimus
ENSRNOG00000005430	AABR07040944.1	63	53.125	ENSUMAG00000021158	-	82	53.125	Ursus_maritimus