EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000005513 (Gene tree)
Gene ID: 29667
Gene Symbol: Srsf5
Alias: HRS|SRp40|Sfrs5
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4277 bases
Position: chr6:104611026-104615302
Accession: 3664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000007583	RRM_1	PF00076.22	9.5e-31	1	2
ENSRNOP00000007583	RRM_1	PF00076.22	9.5e-31	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000007583	-	1180	XM_008764878	ENSRNOP00000007583	269 (aa)	XP_008763102	Q09167

Gene Model

Click here to download ENSRNOG00000005513's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000005513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000005513	Srsf5	59	41.212	ENSRNOG00000001163	Srsf9	68	40.000
ENSRNOG00000005513	Srsf5	66	64.286	ENSRNOG00000006380	Srsf6	53	65.363
ENSRNOG00000005513	Srsf5	60	45.509	ENSRNOG00000050323	Srsf1	65	46.988

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000005513	Srsf5	100	97.794	ENSG00000100650	SRSF5	100	100.000	Homo_sapiens
ENSRNOG00000005513	Srsf5	85	71.915	ENSAPOG00000008642	srsf5b	63	85.405	Acanthochromis_polyacanthus
ENSRNOG00000005513	Srsf5	100	97.794	ENSAMEG00000014574	SRSF5	100	97.794	Ailuropoda_melanoleuca
ENSRNOG00000005513	Srsf5	93	66.926	ENSACIG00000010742	srsf5b	81	75.969	Amphilophus_citrinellus
ENSRNOG00000005513	Srsf5	97	67.041	ENSAOCG00000005719	srsf5b	63	85.405	Amphiprion_ocellaris
ENSRNOG00000005513	Srsf5	97	67.041	ENSAPEG00000007830	srsf5b	63	85.405	Amphiprion_percula
ENSRNOG00000005513	Srsf5	93	67.308	ENSATEG00000019112	srsf5b	63	82.258	Anabas_testudineus
ENSRNOG00000005513	Srsf5	98	77.652	ENSAPLG00000014681	SRSF5	67	94.444	Anas_platyrhynchos
ENSRNOG00000005513	Srsf5	100	94.834	ENSACAG00000005143	SRSF5	67	98.889	Anolis_carolinensis
ENSRNOG00000005513	Srsf5	100	98.155	ENSANAG00000027977	-	100	100.000	Aotus_nancymaae
ENSRNOG00000005513	Srsf5	93	67.188	ENSACLG00000026424	srsf5b	63	84.324	Astatotilapia_calliptera
ENSRNOG00000005513	Srsf5	68	82.703	ENSAMXG00000011932	srsf5b	84	80.000	Astyanax_mexicanus
ENSRNOG00000005513	Srsf5	100	97.794	ENSBTAG00000011596	SRSF5	100	97.794	Bos_taurus
ENSRNOG00000005513	Srsf5	100	97.794	ENSCJAG00000014884	SRSF5	100	100.000	Callithrix_jacchus
ENSRNOG00000005513	Srsf5	100	97.794	ENSCAFG00000016589	SRSF5	100	97.794	Canis_familiaris
ENSRNOG00000005513	Srsf5	100	97.794	ENSCAFG00020005661	SRSF5	100	97.794	Canis_lupus_dingo
ENSRNOG00000005513	Srsf5	100	97.080	ENSCHIG00000016794	SRSF5	100	97.080	Capra_hircus
ENSRNOG00000005513	Srsf5	100	97.810	ENSTSYG00000007786	SRSF5	100	100.000	Carlito_syrichta
ENSRNOG00000005513	Srsf5	100	97.080	ENSCAPG00000008801	SRSF5	100	97.080	Cavia_aperea
ENSRNOG00000005513	Srsf5	100	96.715	ENSCPOG00000039926	SRSF5	100	96.715	Cavia_porcellus
ENSRNOG00000005513	Srsf5	100	97.794	ENSCCAG00000029002	SRSF5	100	100.000	Cebus_capucinus
ENSRNOG00000005513	Srsf5	100	97.426	ENSCATG00000045051	SRSF5	100	100.000	Cercocebus_atys
ENSRNOG00000005513	Srsf5	100	97.059	ENSCLAG00000004755	SRSF5	100	97.059	Chinchilla_lanigera
ENSRNOG00000005513	Srsf5	100	97.794	ENSCSAG00000013041	SRSF5	100	97.794	Chlorocebus_sabaeus
ENSRNOG00000005513	Srsf5	100	95.556	ENSCPBG00000021653	SRSF5	67	99.441	Chrysemys_picta_bellii
ENSRNOG00000005513	Srsf5	100	97.794	ENSCANG00000030560	SRSF5	100	100.000	Colobus_angolensis_palliatus
ENSRNOG00000005513	Srsf5	100	100.000	ENSCGRG00001015339	Srsf5	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000005513	Srsf5	100	100.000	ENSCGRG00000009833	Srsf5	100	100.000	Cricetulus_griseus_crigri
ENSRNOG00000005513	Srsf5	88	69.880	ENSCSEG00000003801	srsf5b	64	82.353	Cynoglossus_semilaevis
ENSRNOG00000005513	Srsf5	68	82.540	ENSCVAG00000017240	srsf5b	63	77.073	Cyprinodon_variegatus
ENSRNOG00000005513	Srsf5	67	82.418	ENSDARG00000027734	srsf5b	90	82.400	Danio_rerio
ENSRNOG00000005513	Srsf5	100	98.148	ENSDNOG00000006160	SRSF5	100	98.148	Dasypus_novemcinctus
ENSRNOG00000005513	Srsf5	100	98.885	ENSDORG00000003989	Srsf5	100	98.885	Dipodomys_ordii
ENSRNOG00000005513	Srsf5	100	86.667	ENSETEG00000020396	SRSF5	66	89.944	Echinops_telfairi
ENSRNOG00000005513	Srsf5	68	64.865	ENSEBUG00000006229	srsf5b	68	65.730	Eptatretus_burgeri
ENSRNOG00000005513	Srsf5	100	97.794	ENSEASG00005016615	SRSF5	100	97.794	Equus_asinus_asinus
ENSRNOG00000005513	Srsf5	100	97.786	ENSECAG00000026873	SRSF5	100	97.786	Equus_caballus
ENSRNOG00000005513	Srsf5	68	78.866	ENSELUG00000019852	srsf5b	85	69.863	Esox_lucius
ENSRNOG00000005513	Srsf5	100	97.794	ENSFCAG00000008848	SRSF5	99	100.000	Felis_catus
ENSRNOG00000005513	Srsf5	67	95.531	ENSFALG00000004979	SRSF5	67	94.972	Ficedula_albicollis
ENSRNOG00000005513	Srsf5	100	98.513	ENSFDAG00000011562	SRSF5	100	98.513	Fukomys_damarensis
ENSRNOG00000005513	Srsf5	68	67.257	ENSGMOG00000000595	srsf5b	97	67.117	Gadus_morhua
ENSRNOG00000005513	Srsf5	100	94.424	ENSGALG00000009421	SRSF5	90	90.323	Gallus_gallus
ENSRNOG00000005513	Srsf5	67	61.134	ENSGACG00000007834	srsf5b	86	71.324	Gasterosteus_aculeatus
ENSRNOG00000005513	Srsf5	100	95.556	ENSGAGG00000004447	SRSF5	67	99.441	Gopherus_agassizii
ENSRNOG00000005513	Srsf5	100	97.794	ENSGGOG00000016462	SRSF5	100	100.000	Gorilla_gorilla
ENSRNOG00000005513	Srsf5	93	66.797	ENSHBUG00000012462	srsf5b	93	75.000	Haplochromis_burtoni
ENSRNOG00000005513	Srsf5	100	98.148	ENSHGLG00000010147	SRSF5	100	98.148	Heterocephalus_glaber_female
ENSRNOG00000005513	Srsf5	100	65.556	ENSHGLG00100000095	-	62	65.517	Heterocephalus_glaber_male
ENSRNOG00000005513	Srsf5	100	98.148	ENSHGLG00100015328	SRSF5	100	98.148	Heterocephalus_glaber_male
ENSRNOG00000005513	Srsf5	68	75.521	ENSHCOG00000005592	srsf5b	64	77.128	Hippocampus_comes
ENSRNOG00000005513	Srsf5	100	98.519	ENSSTOG00000020672	SRSF5	100	98.519	Ictidomys_tridecemlineatus
ENSRNOG00000005513	Srsf5	100	98.162	ENSJJAG00000001688	Srsf5	100	98.162	Jaculus_jaculus
ENSRNOG00000005513	Srsf5	93	66.160	ENSKMAG00000020486	srsf5b	84	79.528	Kryptolebias_marmoratus
ENSRNOG00000005513	Srsf5	68	82.723	ENSLBEG00000013647	srsf5b	63	82.353	Labrus_bergylta
ENSRNOG00000005513	Srsf5	89	84.711	ENSLACG00000005874	SRSF5	67	90.608	Latimeria_chalumnae
ENSRNOG00000005513	Srsf5	100	70.290	ENSLOCG00000012438	srsf5b	69	82.703	Lepisosteus_oculatus
ENSRNOG00000005513	Srsf5	100	97.059	ENSLAFG00000005260	SRSF5	100	97.059	Loxodonta_africana
ENSRNOG00000005513	Srsf5	100	97.794	ENSMFAG00000002393	SRSF5	100	100.000	Macaca_fascicularis
ENSRNOG00000005513	Srsf5	100	97.794	ENSMNEG00000030872	SRSF5	100	100.000	Macaca_nemestrina
ENSRNOG00000005513	Srsf5	100	97.426	ENSMLEG00000030017	SRSF5	100	100.000	Mandrillus_leucophaeus
ENSRNOG00000005513	Srsf5	87	69.672	ENSMAMG00000002673	srsf5b	63	80.978	Mastacembelus_armatus
ENSRNOG00000005513	Srsf5	93	67.188	ENSMZEG00005003550	srsf5b	63	84.324	Maylandia_zebra
ENSRNOG00000005513	Srsf5	75	91.045	ENSMGAG00000011835	SRSF5	62	91.429	Meleagris_gallopavo
ENSRNOG00000005513	Srsf5	100	99.630	ENSMAUG00000009544	Srsf5	100	99.630	Mesocricetus_auratus
ENSRNOG00000005513	Srsf5	100	98.885	ENSMICG00000037432	-	100	100.000	Microcebus_murinus
ENSRNOG00000005513	Srsf5	100	99.259	ENSMOCG00000013134	Srsf5	100	99.259	Microtus_ochrogaster
ENSRNOG00000005513	Srsf5	67	81.622	ENSMMOG00000000137	srsf5b	93	61.538	Mola_mola
ENSRNOG00000005513	Srsf5	67	99.441	ENSMODG00000011362	SRSF5	67	99.441	Monodelphis_domestica
ENSRNOG00000005513	Srsf5	68	83.684	ENSMALG00000021875	srsf5b	84	75.194	Monopterus_albus
ENSRNOG00000005513	Srsf5	100	100.000	ENSMUSG00000021134	Srsf5	100	100.000	Mus_musculus
ENSRNOG00000005513	Srsf5	100	100.000	MGP_PahariEiJ_G0029659	Srsf5	100	100.000	Mus_pahari
ENSRNOG00000005513	Srsf5	100	97.794	ENSMPUG00000007458	SRSF5	100	97.794	Mustela_putorius_furo
ENSRNOG00000005513	Srsf5	100	94.624	ENSMLUG00000011939	SRSF5	100	94.624	Myotis_lucifugus
ENSRNOG00000005513	Srsf5	100	99.259	ENSNGAG00000010073	-	100	99.259	Nannospalax_galili
ENSRNOG00000005513	Srsf5	93	65.900	ENSNBRG00000001285	srsf5b	63	83.422	Neolamprologus_brichardi
ENSRNOG00000005513	Srsf5	100	97.794	ENSNLEG00000001615	SRSF5	100	100.000	Nomascus_leucogenys
ENSRNOG00000005513	Srsf5	100	94.286	ENSOPRG00000008286	SRSF5	100	94.286	Ochotona_princeps
ENSRNOG00000005513	Srsf5	100	97.407	ENSODEG00000013469	-	100	97.407	Octodon_degus
ENSRNOG00000005513	Srsf5	67	97.765	ENSODEG00000000700	-	68	97.765	Octodon_degus
ENSRNOG00000005513	Srsf5	93	67.188	ENSONIG00000005759	srsf5b	63	84.324	Oreochromis_niloticus
ENSRNOG00000005513	Srsf5	100	90.741	ENSOANG00000013336	SRSF5	67	93.296	Ornithorhynchus_anatinus
ENSRNOG00000005513	Srsf5	100	96.014	ENSOCUG00000009274	SRSF5	100	96.014	Oryctolagus_cuniculus
ENSRNOG00000005513	Srsf5	68	78.534	ENSORLG00000029854	srsf5b	58	79.787	Oryzias_latipes
ENSRNOG00000005513	Srsf5	93	64.794	ENSORLG00015001720	srsf5b	63	81.818	Oryzias_latipes_hsok
ENSRNOG00000005513	Srsf5	100	98.148	ENSOGAG00000015122	SRSF5	100	98.148	Otolemur_garnettii
ENSRNOG00000005513	Srsf5	100	97.794	ENSPPAG00000029921	SRSF5	100	100.000	Pan_paniscus
ENSRNOG00000005513	Srsf5	100	97.794	ENSPPRG00000012903	SRSF5	99	100.000	Panthera_pardus
ENSRNOG00000005513	Srsf5	100	97.794	ENSPTIG00000018589	SRSF5	99	100.000	Panthera_tigris_altaica
ENSRNOG00000005513	Srsf5	100	97.794	ENSPTRG00000006488	SRSF5	100	100.000	Pan_troglodytes
ENSRNOG00000005513	Srsf5	100	97.426	ENSPANG00000021091	SRSF5	100	100.000	Papio_anubis
ENSRNOG00000005513	Srsf5	100	95.185	ENSPSIG00000012522	SRSF5	68	99.441	Pelodiscus_sinensis
ENSRNOG00000005513	Srsf5	100	100.000	ENSPEMG00000020173	Srsf5	100	100.000	Peromyscus_maniculatus_bairdii
ENSRNOG00000005513	Srsf5	68	61.881	ENSPMAG00000007790	srsf5b	67	62.694	Petromyzon_marinus
ENSRNOG00000005513	Srsf5	67	99.441	ENSPCIG00000011877	SRSF5	67	99.441	Phascolarctos_cinereus
ENSRNOG00000005513	Srsf5	96	66.176	ENSPMEG00000012751	srsf5b	84	75.000	Poecilia_mexicana
ENSRNOG00000005513	Srsf5	100	97.794	ENSPPYG00000005945	SRSF5	100	97.794	Pongo_abelii
ENSRNOG00000005513	Srsf5	54	99.315	ENSPCAG00000004405	SRSF5	100	99.315	Procavia_capensis
ENSRNOG00000005513	Srsf5	100	98.519	ENSPCOG00000014442	SRSF5	100	98.519	Propithecus_coquereli
ENSRNOG00000005513	Srsf5	100	76.471	ENSPVAG00000009828	SRSF5	100	76.471	Pteropus_vampyrus
ENSRNOG00000005513	Srsf5	93	71.318	ENSPNYG00000002669	srsf5b	94	75.000	Pundamilia_nyererei
ENSRNOG00000005513	Srsf5	68	82.162	ENSPNAG00000011262	srsf5b	84	79.200	Pygocentrus_nattereri
ENSRNOG00000005513	Srsf5	100	97.794	ENSRBIG00000013003	SRSF5	100	100.000	Rhinopithecus_bieti
ENSRNOG00000005513	Srsf5	100	97.794	ENSRROG00000043407	SRSF5	100	100.000	Rhinopithecus_roxellana
ENSRNOG00000005513	Srsf5	100	97.794	ENSSBOG00000030784	SRSF5	100	100.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000005513	Srsf5	67	99.441	ENSSHAG00000002871	SRSF5	67	99.441	Sarcophilus_harrisii
ENSRNOG00000005513	Srsf5	68	77.723	ENSSMAG00000019728	srsf5b	61	79.695	Scophthalmus_maximus
ENSRNOG00000005513	Srsf5	96	67.286	ENSSDUG00000005766	srsf5b	65	81.081	Seriola_dumerili
ENSRNOG00000005513	Srsf5	93	68.321	ENSSLDG00000023255	srsf5b	84	75.000	Seriola_lalandi_dorsalis
ENSRNOG00000005513	Srsf5	100	87.407	ENSSARG00000001059	SRSF5	66	86.034	Sorex_araneus
ENSRNOG00000005513	Srsf5	100	84.892	ENSSPUG00000002464	SRSF5	90	91.729	Sphenodon_punctatus
ENSRNOG00000005513	Srsf5	85	71.489	ENSSPAG00000015325	srsf5b	63	84.865	Stegastes_partitus
ENSRNOG00000005513	Srsf5	100	98.893	ENSSSCG00000032583	SRSF5	100	98.893	Sus_scrofa
ENSRNOG00000005513	Srsf5	89	85.000	ENSTGUG00000011425	SRSF5	67	94.972	Taeniopygia_guttata
ENSRNOG00000005513	Srsf5	68	83.333	ENSTRUG00000017811	srsf5b	59	84.153	Takifugu_rubripes
ENSRNOG00000005513	Srsf5	100	65.827	ENSTNIG00000016411	srsf5b	66	84.153	Tetraodon_nigroviridis
ENSRNOG00000005513	Srsf5	100	90.217	ENSTBEG00000001972	SRSF5	65	97.765	Tupaia_belangeri
ENSRNOG00000005513	Srsf5	99	97.070	ENSTTRG00000003318	SRSF5	100	97.070	Tursiops_truncatus
ENSRNOG00000005513	Srsf5	100	97.794	ENSUAMG00000014184	SRSF5	100	97.794	Ursus_americanus
ENSRNOG00000005513	Srsf5	100	98.155	ENSUMAG00000009827	SRSF5	100	98.155	Ursus_maritimus
ENSRNOG00000005513	Srsf5	100	98.519	ENSVPAG00000006448	SRSF5	100	98.519	Vicugna_pacos
ENSRNOG00000005513	Srsf5	100	97.794	ENSVVUG00000003790	SRSF5	100	97.794	Vulpes_vulpes
ENSRNOG00000005513	Srsf5	94	83.846	ENSXETG00000002211	srsf5	67	92.308	Xenopus_tropicalis
ENSRNOG00000005513	Srsf5	97	66.667	ENSXMAG00000026416	srsf5b	84	75.969	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0001889	liver development	9199345.	IEP	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	9199345.	IDA	Function
GO:0005515	protein binding	27191843.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	23233666.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0009611	response to wounding	-	ISO	Process
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0016607	nuclear speck	-	ISS	Component
GO:0032868	response to insulin	15684423.	IDA	Process
GO:0032868	response to insulin	11283022.	IEP	Process
GO:0032869	cellular response to insulin stimulus	7686911.	IEP	Process
GO:0033120	positive regulation of RNA splicing	9199345.	IMP	Process
GO:0043422	protein kinase B binding	15684423.	IPI	Function
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process
GO:0050733	RS domain binding	-	ISO	Function
GO:0051726	regulation of cell cycle	7686911.	IEP	Process
GO:0097421	liver regeneration	7686911.	IEP	Process