EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000005849 (Gene tree)
Gene ID
50655
Gene Symbol
Aco1
Alias
AH|Acon1|IRE-BP 1|IRP1
Full Name
aconitase 1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
56195 bases
Position
chr5:56425024-56481218
Accession
2019
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000008337AconitasePF00330.208e-18211
ENSRNOP00000008337Aconitase_CPF00694.192.1e-4611
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000008337-3465-ENSRNOP00000008337889 (aa)-G3V6S2
Gene Model
Click here to download ENSRNOG00000005849's gene model file
Pathways
Pathway IDPathway NameSource
rno00020Citrate cycle (TCA cycle)KEGG
rno00630Glyoxylate and dicarboxylate metabolismKEGG
rno01100Metabolic pathwaysKEGG
rno01200Carbon metabolismKEGG
rno012102-Oxocarboxylic acid metabolismKEGG
rno01230Biosynthesis of amino acidsKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000005849's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000005849Aco19961.784ENSRNOG00000013271Ireb29161.651
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000005849Aco110093.363ENSG00000122729ACO110093.363Homo_sapiens
ENSRNOG00000005849Aco110082.452ENSAPOG00000008670aco19982.452Acanthochromis_polyacanthus
ENSRNOG00000005849Aco110093.034ENSAMEG00000003746ACO110093.034Ailuropoda_melanoleuca
ENSRNOG00000005849Aco110082.790ENSACIG00000014377aco19982.790Amphilophus_citrinellus
ENSRNOG00000005849Aco110082.902ENSAOCG00000007699aco19982.902Amphiprion_ocellaris
ENSRNOG00000005849Aco110082.790ENSAPEG00000014370aco19982.790Amphiprion_percula
ENSRNOG00000005849Aco19983.446ENSATEG00000000560aco19983.446Anabas_testudineus
ENSRNOG00000005849Aco19986.824ENSAPLG00000015490ACO19986.824Anas_platyrhynchos
ENSRNOG00000005849Aco19786.977ENSACAG00000001541ACO19986.977Anolis_carolinensis
ENSRNOG00000005849Aco19991.892ENSANAG00000003359ACO19991.892Aotus_nancymaae
ENSRNOG00000005849Aco110082.677ENSACLG00000007755aco19982.677Astatotilapia_calliptera
ENSRNOG00000005849Aco19983.108ENSAMXG00000002499aco19983.108Astyanax_mexicanus
ENSRNOG00000005849Aco110094.151ENSBTAG00000000555ACO110094.151Bos_taurus
ENSRNOG00000005849Aco110092.126ENSCJAG00000007687ACO110092.126Callithrix_jacchus
ENSRNOG00000005849Aco110092.584ENSCAFG00000001786ACO19992.584Canis_familiaris
ENSRNOG00000005849Aco110092.688ENSCAFG00020014553ACO110092.688Canis_lupus_dingo
ENSRNOG00000005849Aco110094.376ENSCHIG00000007667ACO110094.376Capra_hircus
ENSRNOG00000005849Aco110094.038ENSTSYG00000004179ACO19994.038Carlito_syrichta
ENSRNOG00000005849Aco110073.341ENSCAPG00000007254ACO110073.228Cavia_aperea
ENSRNOG00000005849Aco110091.901ENSCPOG00000003768ACO110091.901Cavia_porcellus
ENSRNOG00000005849Aco110092.126ENSCCAG00000022465ACO110092.126Cebus_capucinus
ENSRNOG00000005849Aco110093.026ENSCATG00000045333ACO110093.026Cercocebus_atys
ENSRNOG00000005849Aco110092.463ENSCLAG00000002487ACO110092.463Chinchilla_lanigera
ENSRNOG00000005849Aco110093.026ENSCSAG00000009824ACO19993.026Chlorocebus_sabaeus
ENSRNOG00000005849Aco19075.187ENSCHOG00000008996ACO19075.075Choloepus_hoffmanni
ENSRNOG00000005849Aco19988.401ENSCPBG00000008077ACO19988.401Chrysemys_picta_bellii
ENSRNOG00000005849Aco110092.801ENSCANG00000014847ACO110092.801Colobus_angolensis_palliatus
ENSRNOG00000005849Aco110097.075ENSCGRG00001024337Aco110097.075Cricetulus_griseus_chok1gshd
ENSRNOG00000005849Aco110095.951ENSCGRG00000004877-10095.951Cricetulus_griseus_crigri
ENSRNOG00000005849Aco19978.354ENSCSEG00000018262aco19978.354Cynoglossus_semilaevis
ENSRNOG00000005849Aco19976.888ENSCVAG00000020264aco19976.888Cyprinodon_variegatus
ENSRNOG00000005849Aco110082.565ENSDARG00000026376aco19982.565Danio_rerio
ENSRNOG00000005849Aco110093.363ENSDNOG00000003951ACO110093.363Dasypus_novemcinctus
ENSRNOG00000005849Aco110093.138ENSDORG00000014246Aco110093.138Dipodomys_ordii
ENSRNOG00000005849Aco18670.899ENSETEG00000012415-8570.899Echinops_telfairi
ENSRNOG00000005849Aco19958.501ENSEBUG00000015441aco19758.501Eptatretus_burgeri
ENSRNOG00000005849Aco110094.151ENSEASG00005004602ACO110094.151Equus_asinus_asinus
ENSRNOG00000005849Aco110094.038ENSECAG00000014846ACO110094.038Equus_caballus
ENSRNOG00000005849Aco110081.552ENSEEUG00000015174ACO110081.552Erinaceus_europaeus
ENSRNOG00000005849Aco110082.002ENSELUG00000016812aco19782.002Esox_lucius
ENSRNOG00000005849Aco110093.138ENSFCAG00000001293ACO110093.138Felis_catus
ENSRNOG00000005849Aco19986.937ENSFALG00000001167ACO19986.937Ficedula_albicollis
ENSRNOG00000005849Aco110092.688ENSFDAG00000016058ACO110092.688Fukomys_damarensis
ENSRNOG00000005849Aco19982.413ENSFHEG00000005619aco19982.413Fundulus_heteroclitus
ENSRNOG00000005849Aco19979.120ENSGMOG00000005514aco19979.120Gadus_morhua
ENSRNOG00000005849Aco19987.050ENSGALG00000002162ACO19987.050Gallus_gallus
ENSRNOG00000005849Aco110082.115ENSGACG00000001637aco19982.115Gasterosteus_aculeatus
ENSRNOG00000005849Aco19987.950ENSGAGG00000023315ACO19987.950Gopherus_agassizii
ENSRNOG00000005849Aco110093.138ENSGGOG00000016306ACO110093.138Gorilla_gorilla
ENSRNOG00000005849Aco110082.790ENSHBUG00000008952aco19982.790Haplochromis_burtoni
ENSRNOG00000005849Aco110093.138ENSHGLG00000018922Aco110093.138Heterocephalus_glaber_female
ENSRNOG00000005849Aco110093.138ENSHGLG00100000149Aco110093.138Heterocephalus_glaber_male
ENSRNOG00000005849Aco19979.707ENSHCOG00000015881aco19979.707Hippocampus_comes
ENSRNOG00000005849Aco110082.565ENSIPUG00000020088ACO19982.565Ictalurus_punctatus
ENSRNOG00000005849Aco110094.938ENSSTOG00000006942ACO19994.938Ictidomys_tridecemlineatus
ENSRNOG00000005849Aco110095.726ENSJJAG00000013824Aco110095.726Jaculus_jaculus
ENSRNOG00000005849Aco19981.982ENSKMAG00000015759aco19981.982Kryptolebias_marmoratus
ENSRNOG00000005849Aco110078.315ENSLBEG00000013866aco19978.315Labrus_bergylta
ENSRNOG00000005849Aco17572.997ENSLACG00000000936ACO19972.985Latimeria_chalumnae
ENSRNOG00000005849Aco110084.927ENSLOCG00000011082aco19984.927Lepisosteus_oculatus
ENSRNOG00000005849Aco110092.351ENSLAFG00000013470ACO110092.351Loxodonta_africana
ENSRNOG00000005849Aco110093.026ENSMFAG00000001702ACO110093.026Macaca_fascicularis
ENSRNOG00000005849Aco110093.138ENSMMUG00000008196ACO110093.138Macaca_mulatta
ENSRNOG00000005849Aco110092.913ENSMNEG00000045040ACO110092.913Macaca_nemestrina
ENSRNOG00000005849Aco110093.138ENSMLEG00000005636ACO110093.138Mandrillus_leucophaeus
ENSRNOG00000005849Aco110083.465ENSMAMG00000002915aco19983.465Mastacembelus_armatus
ENSRNOG00000005849Aco19979.171ENSMZEG00005012733aco19978.835Maylandia_zebra
ENSRNOG00000005849Aco19971.540ENSMGAG00000008851ACO19971.540Meleagris_gallopavo
ENSRNOG00000005849Aco110096.513ENSMAUG00000021408Aco110096.513Mesocricetus_auratus
ENSRNOG00000005849Aco110093.363ENSMICG00000006540ACO110093.363Microcebus_murinus
ENSRNOG00000005849Aco110096.400ENSMOCG00000015393Aco110096.400Microtus_ochrogaster
ENSRNOG00000005849Aco110081.327ENSMMOG00000020282aco19981.327Mola_mola
ENSRNOG00000005849Aco110089.651ENSMODG00000004463ACO110089.651Monodelphis_domestica
ENSRNOG00000005849Aco110082.790ENSMALG00000019764aco19982.790Monopterus_albus
ENSRNOG00000005849Aco110096.963MGP_CAROLIEiJ_G0025892Aco110096.963Mus_caroli
ENSRNOG00000005849Aco110096.963ENSMUSG00000028405Aco110096.963Mus_musculus
ENSRNOG00000005849Aco110097.638MGP_PahariEiJ_G0024015Aco110097.638Mus_pahari
ENSRNOG00000005849Aco110097.413MGP_SPRETEiJ_G0026841Aco110097.413Mus_spretus
ENSRNOG00000005849Aco110093.251ENSMPUG00000004340ACO110093.251Mustela_putorius_furo
ENSRNOG00000005849Aco110092.013ENSMLUG00000003029ACO110092.013Myotis_lucifugus
ENSRNOG00000005849Aco110095.951ENSNGAG00000005703Aco110095.951Nannospalax_galili
ENSRNOG00000005849Aco110065.324ENSNBRG00000008973aco19965.101Neolamprologus_brichardi
ENSRNOG00000005849Aco110093.251ENSNLEG00000003409ACO110093.251Nomascus_leucogenys
ENSRNOG00000005849Aco19082.460ENSMEUG00000014756ACO19082.460Notamacropus_eugenii
ENSRNOG00000005849Aco110089.426ENSOPRG00000016791ACO110089.426Ochotona_princeps
ENSRNOG00000005849Aco110088.526ENSODEG00000015432-10088.076Octodon_degus
ENSRNOG00000005849Aco110091.114ENSODEG00000001240-10091.114Octodon_degus
ENSRNOG00000005849Aco110082.565ENSONIG00000019869aco19982.565Oreochromis_niloticus
ENSRNOG00000005849Aco18191.563ENSOANG00000012132ACO110091.563Ornithorhynchus_anatinus
ENSRNOG00000005849Aco110092.214ENSOCUG00000015960ACO110091.991Oryctolagus_cuniculus
ENSRNOG00000005849Aco19982.995ENSORLG00000020656aco19982.995Oryzias_latipes
ENSRNOG00000005849Aco19982.545ENSORLG00020010991aco19982.545Oryzias_latipes_hni
ENSRNOG00000005849Aco19982.658ENSORLG00015011785aco19982.658Oryzias_latipes_hsok
ENSRNOG00000005849Aco19980.813ENSOMEG00000000660aco19980.813Oryzias_melastigma
ENSRNOG00000005849Aco110093.363ENSOGAG00000010522ACO110093.363Otolemur_garnettii
ENSRNOG00000005849Aco110094.376ENSOARG00000014707ACO19894.376Ovis_aries
ENSRNOG00000005849Aco110093.251ENSPPAG00000033498ACO110093.251Pan_paniscus
ENSRNOG00000005849Aco110093.138ENSPPRG00000009875ACO110093.138Panthera_pardus
ENSRNOG00000005849Aco110093.026ENSPTIG00000016606ACO19893.026Panthera_tigris_altaica
ENSRNOG00000005849Aco110093.251ENSPTRG00000020843ACO110093.251Pan_troglodytes
ENSRNOG00000005849Aco110093.138ENSPANG00000025270ACO110093.138Papio_anubis
ENSRNOG00000005849Aco110081.777ENSPKIG00000023168aco19981.777Paramormyrops_kingsleyae
ENSRNOG00000005849Aco19988.401ENSPSIG00000008030ACO19988.401Pelodiscus_sinensis
ENSRNOG00000005849Aco19983.315ENSPMGG00000020708aco19983.315Periophthalmus_magnuspinnatus
ENSRNOG00000005849Aco110096.850ENSPEMG00000018464Aco110096.850Peromyscus_maniculatus_bairdii
ENSRNOG00000005849Aco110089.426ENSPCIG00000029321ACO110090.012Phascolarctos_cinereus
ENSRNOG00000005849Aco19981.623ENSPFOG00000013405aco19981.623Poecilia_formosa
ENSRNOG00000005849Aco19082.750ENSPLAG00000023422aco19882.750Poecilia_latipinna
ENSRNOG00000005849Aco19082.668ENSPMEG00000011800aco19882.668Poecilia_mexicana
ENSRNOG00000005849Aco19981.623ENSPREG00000021791aco19981.623Poecilia_reticulata
ENSRNOG00000005849Aco110093.026ENSPPYG00000019150ACO19593.026Pongo_abelii
ENSRNOG00000005849Aco17895.283ENSPCAG00000013222ACO19195.283Procavia_capensis
ENSRNOG00000005849Aco18993.038ENSPCOG00000021198ACO110093.038Propithecus_coquereli
ENSRNOG00000005849Aco19687.500ENSPVAG00000002372ACO19987.500Pteropus_vampyrus
ENSRNOG00000005849Aco110082.790ENSPNYG00000009425aco19982.790Pundamilia_nyererei
ENSRNOG00000005849Aco110083.577ENSPNAG00000017918aco110083.577Pygocentrus_nattereri
ENSRNOG00000005849Aco110092.801ENSRBIG00000034592ACO110092.801Rhinopithecus_bieti
ENSRNOG00000005849Aco110092.913ENSRROG00000042672ACO110092.913Rhinopithecus_roxellana
ENSRNOG00000005849Aco110092.463ENSSBOG00000026008ACO110092.463Saimiri_boliviensis_boliviensis
ENSRNOG00000005849Aco110089.663ENSSHAG00000008924ACO110089.663Sarcophilus_harrisii
ENSRNOG00000005849Aco110083.127ENSSFOG00015018941aco19983.127Scleropages_formosus
ENSRNOG00000005849Aco17583.433ENSSMAG00000018908aco18083.333Scophthalmus_maximus
ENSRNOG00000005849Aco19982.976ENSSDUG00000002984aco19982.976Seriola_dumerili
ENSRNOG00000005849Aco19983.089ENSSLDG00000013952aco19983.089Seriola_lalandi_dorsalis
ENSRNOG00000005849Aco19689.953ENSSARG00000008437ACO110089.953Sorex_araneus
ENSRNOG00000005849Aco19986.020ENSSPUG00000002916ACO19986.020Sphenodon_punctatus
ENSRNOG00000005849Aco110083.240ENSSPAG00000019147aco19983.240Stegastes_partitus
ENSRNOG00000005849Aco110094.488ENSSSCG00000023807ACO110094.488Sus_scrofa
ENSRNOG00000005849Aco19986.599ENSTGUG00000001505ACO19986.599Taeniopygia_guttata
ENSRNOG00000005849Aco19982.280ENSTRUG00000006888aco19982.167Takifugu_rubripes
ENSRNOG00000005849Aco19980.135ENSTNIG00000005288aco19980.135Tetraodon_nigroviridis
ENSRNOG00000005849Aco110090.439ENSTBEG00000012369ACO110090.439Tupaia_belangeri
ENSRNOG00000005849Aco110094.376ENSTTRG00000016991ACO19994.376Tursiops_truncatus
ENSRNOG00000005849Aco110093.363ENSUAMG00000020699ACO110093.363Ursus_americanus
ENSRNOG00000005849Aco110093.363ENSUMAG00000005807ACO110093.363Ursus_maritimus
ENSRNOG00000005849Aco19693.662ENSVPAG00000009876ACO110093.662Vicugna_pacos
ENSRNOG00000005849Aco110092.688ENSVVUG00000021152ACO19192.688Vulpes_vulpes
ENSRNOG00000005849Aco19984.719ENSXETG00000009184aco19984.719Xenopus_tropicalis
ENSRNOG00000005849Aco15081.406ENSXCOG00000005638aco19681.406Xiphophorus_couchianus
ENSRNOG00000005849Aco19981.849ENSXMAG00000023603aco19981.849Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001889liver development755797.IEPProcess
GO:0003723RNA binding1527027.IDAFunction
GO:0003723RNA binding-ISOFunction
GO:0003994aconitate hydratase activity21873635.IBAFunction
GO:0003994aconitate hydratase activity9092825.11264001.IDAFunction
GO:0003994aconitate hydratase activity-IEAFunction
GO:0003994aconitate hydratase activity-ISOFunction
GO:0003994aconitate hydratase activity-ISSFunction
GO:0005737cytoplasm-ISOComponent
GO:0005739mitochondrion21873635.IBAComponent
GO:0005739mitochondrion-IEAComponent
GO:0005739mitochondrion-ISOComponent
GO:0005783endoplasmic reticulum16144863.IDAComponent
GO:0005783endoplasmic reticulum-IEAComponent
GO:0005783endoplasmic reticulum-ISOComponent
GO:0005794Golgi apparatus16144863.IDAComponent
GO:0005794Golgi apparatus-IEAComponent
GO:0005794Golgi apparatus-ISOComponent
GO:0005829cytosol21873635.IBAComponent
GO:0005829cytosol9092825.12672910.IDAComponent
GO:0005829cytosol-IEAComponent
GO:0005829cytosol-ISOComponent
GO:0006099tricarboxylic acid cycle21873635.IBAProcess
GO:0006101citrate metabolic process21873635.IBAProcess
GO:0006101citrate metabolic process-IEAProcess
GO:0006101citrate metabolic process-ISOProcess
GO:0006101citrate metabolic process-ISSProcess
GO:0006417regulation of translation-IEAProcess
GO:0006417regulation of translation-ISOProcess
GO:0006879cellular iron ion homeostasis15086359.IDAProcess
GO:0006879cellular iron ion homeostasis-IEAProcess
GO:0006879cellular iron ion homeostasis-ISOProcess
GO:0009791post-embryonic development-IEAProcess
GO:0009791post-embryonic development-ISOProcess
GO:0010040response to iron(II) ion-IEAProcess
GO:0010040response to iron(II) ion-ISOProcess
GO:0010040response to iron(II) ion-ISSProcess
GO:0010468regulation of gene expression-ISOProcess
GO:0030350iron-responsive element binding9092825.12672910.15086359.IDAFunction
GO:0030350iron-responsive element binding-IEAFunction
GO:0030350iron-responsive element binding-ISOFunction
GO:0030350iron-responsive element binding-ISSFunction
GO:0043231intracellular membrane-bounded organelle16144863.IDAComponent
GO:0046872metal ion binding-IEAFunction
GO:0048027mRNA 5'-UTR binding9092825.IDAFunction
GO:0050892intestinal absorption-IEAProcess
GO:0050892intestinal absorption-ISOProcess
GO:0051536iron-sulfur cluster binding9092825.IDAFunction
GO:00515383 iron, 4 sulfur cluster binding21873635.IBAFunction
GO:00515383 iron, 4 sulfur cluster binding-IEAFunction
GO:00515383 iron, 4 sulfur cluster binding-ISOFunction
GO:00515394 iron, 4 sulfur cluster binding21873635.IBAFunction
GO:00515394 iron, 4 sulfur cluster binding-IEAFunction
GO:00515394 iron, 4 sulfur cluster binding-ISOFunction
GO:00515394 iron, 4 sulfur cluster binding-ISSFunction

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