EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000005907 (Gene tree)
Gene ID: 362412
Gene Symbol: Rad18
Alias: LOC362412|MGC156682
Full Name: RAD18 E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 84003 bases
Position: chr4:144536729-144620731
Accession: 1306993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000063400	SAP	PF02037.27	4.8e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000066468	-	2467	XM_006237036	ENSRNOP00000063400	494 (aa)	XP_006237098	A0JPN0

Gene Model

Click here to download ENSRNOG00000005907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000005907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000005907	Rad18	100	75.800	ENSG00000070950	RAD18	98	88.764	Homo_sapiens
ENSRNOG00000005907	Rad18	79	40.952	ENSAPOG00000005260	rad18	84	40.476	Acanthochromis_polyacanthus
ENSRNOG00000005907	Rad18	100	67.487	ENSAMEG00000012375	RAD18	100	67.487	Ailuropoda_melanoleuca
ENSRNOG00000005907	Rad18	69	41.223	ENSACIG00000020655	rad18	86	40.526	Amphilophus_citrinellus
ENSRNOG00000005907	Rad18	79	41.355	ENSAOCG00000004507	rad18	61	62.000	Amphiprion_ocellaris
ENSRNOG00000005907	Rad18	79	42.417	ENSAPEG00000016837	rad18	65	62.000	Amphiprion_percula
ENSRNOG00000005907	Rad18	95	46.888	ENSAPLG00000003138	RAD18	91	49.539	Anas_platyrhynchos
ENSRNOG00000005907	Rad18	100	76.200	ENSANAG00000033360	RAD18	100	76.400	Aotus_nancymaae
ENSRNOG00000005907	Rad18	73	45.088	ENSACLG00000023506	rad18	82	44.584	Astatotilapia_calliptera
ENSRNOG00000005907	Rad18	83	43.468	ENSAMXG00000002534	rad18	92	42.619	Astyanax_mexicanus
ENSRNOG00000005907	Rad18	100	74.850	ENSBTAG00000012142	RAD18	100	74.850	Bos_taurus
ENSRNOG00000005907	Rad18	100	75.400	ENSCJAG00000040303	RAD18	100	75.400	Callithrix_jacchus
ENSRNOG00000005907	Rad18	100	74.751	ENSCAFG00000005548	RAD18	100	74.751	Canis_familiaris
ENSRNOG00000005907	Rad18	100	74.751	ENSCAFG00020009228	RAD18	100	74.751	Canis_lupus_dingo
ENSRNOG00000005907	Rad18	100	74.900	ENSCHIG00000007965	RAD18	100	74.900	Capra_hircus
ENSRNOG00000005907	Rad18	100	74.950	ENSTSYG00000012189	RAD18	100	74.950	Carlito_syrichta
ENSRNOG00000005907	Rad18	96	66.732	ENSCAPG00000000356	RAD18	100	65.945	Cavia_aperea
ENSRNOG00000005907	Rad18	100	74.597	ENSCPOG00000013890	RAD18	100	73.790	Cavia_porcellus
ENSRNOG00000005907	Rad18	100	76.600	ENSCCAG00000022920	RAD18	100	76.800	Cebus_capucinus
ENSRNOG00000005907	Rad18	100	75.600	ENSCATG00000039277	RAD18	100	75.600	Cercocebus_atys
ENSRNOG00000005907	Rad18	100	75.551	ENSCLAG00000003652	RAD18	100	75.150	Chinchilla_lanigera
ENSRNOG00000005907	Rad18	100	75.446	ENSCSAG00000010783	RAD18	100	75.644	Chlorocebus_sabaeus
ENSRNOG00000005907	Rad18	99	50.591	ENSCPBG00000014787	RAD18	99	51.703	Chrysemys_picta_bellii
ENSRNOG00000005907	Rad18	100	75.848	ENSCANG00000007308	RAD18	100	75.848	Colobus_angolensis_palliatus
ENSRNOG00000005907	Rad18	100	89.738	ENSCGRG00001018154	-	100	89.738	Cricetulus_griseus_chok1gshd
ENSRNOG00000005907	Rad18	100	86.922	ENSCGRG00001010209	-	100	86.922	Cricetulus_griseus_chok1gshd
ENSRNOG00000005907	Rad18	100	87.123	ENSCGRG00000019636	-	100	87.123	Cricetulus_griseus_crigri
ENSRNOG00000005907	Rad18	100	89.738	ENSCGRG00000007283	-	100	89.738	Cricetulus_griseus_crigri
ENSRNOG00000005907	Rad18	80	41.589	ENSCSEG00000002516	rad18	82	41.469	Cynoglossus_semilaevis
ENSRNOG00000005907	Rad18	76	47.120	ENSDARG00000027938	rad18	87	46.373	Danio_rerio
ENSRNOG00000005907	Rad18	100	75.649	ENSDNOG00000040055	RAD18	100	75.649	Dasypus_novemcinctus
ENSRNOG00000005907	Rad18	100	77.092	ENSDORG00000001099	Rad18	100	76.892	Dipodomys_ordii
ENSRNOG00000005907	Rad18	89	57.650	ENSETEG00000002268	RAD18	97	60.093	Echinops_telfairi
ENSRNOG00000005907	Rad18	100	79.441	ENSEASG00005013316	RAD18	94	78.842	Equus_asinus_asinus
ENSRNOG00000005907	Rad18	100	79.441	ENSECAG00000010746	RAD18	94	78.842	Equus_caballus
ENSRNOG00000005907	Rad18	65	69.565	ENSEEUG00000000236	-	73	69.565	Erinaceus_europaeus
ENSRNOG00000005907	Rad18	72	42.821	ENSELUG00000000733	rad18	79	42.564	Esox_lucius
ENSRNOG00000005907	Rad18	100	77.246	ENSFCAG00000025747	RAD18	100	77.246	Felis_catus
ENSRNOG00000005907	Rad18	79	53.904	ENSFALG00000013625	RAD18	88	53.904	Ficedula_albicollis
ENSRNOG00000005907	Rad18	100	74.052	ENSFDAG00000009907	RAD18	100	74.052	Fukomys_damarensis
ENSRNOG00000005907	Rad18	76	56.842	ENSGALG00000008368	RAD18	93	52.174	Gallus_gallus
ENSRNOG00000005907	Rad18	71	44.205	ENSGACG00000000920	rad18	84	43.003	Gasterosteus_aculeatus
ENSRNOG00000005907	Rad18	93	50.746	ENSGAGG00000005184	RAD18	100	50.746	Gopherus_agassizii
ENSRNOG00000005907	Rad18	100	76.400	ENSGGOG00000008391	RAD18	100	76.600	Gorilla_gorilla
ENSRNOG00000005907	Rad18	65	47.516	ENSHBUG00000013322	rad18	81	46.894	Haplochromis_burtoni
ENSRNOG00000005907	Rad18	60	79.798	ENSHGLG00000009196	-	96	79.798	Heterocephalus_glaber_female
ENSRNOG00000005907	Rad18	60	79.798	ENSHGLG00100017675	-	96	79.798	Heterocephalus_glaber_male
ENSRNOG00000005907	Rad18	74	43.432	ENSIPUG00000018681	rad18	99	38.925	Ictalurus_punctatus
ENSRNOG00000005907	Rad18	60	79.461	ENSSTOG00000004870	-	96	79.461	Ictidomys_tridecemlineatus
ENSRNOG00000005907	Rad18	100	74.194	ENSJJAG00000001484	Rad18	100	74.194	Jaculus_jaculus
ENSRNOG00000005907	Rad18	77	43.350	ENSKMAG00000020725	rad18	81	42.857	Kryptolebias_marmoratus
ENSRNOG00000005907	Rad18	58	52.104	ENSLACG00000018437	RAD18	96	52.288	Latimeria_chalumnae
ENSRNOG00000005907	Rad18	80	47.772	ENSLOCG00000010629	rad18	87	47.804	Lepisosteus_oculatus
ENSRNOG00000005907	Rad18	89	66.186	ENSLAFG00000004667	RAD18	97	66.879	Loxodonta_africana
ENSRNOG00000005907	Rad18	100	75.600	ENSMFAG00000028864	RAD18	100	75.600	Macaca_fascicularis
ENSRNOG00000005907	Rad18	100	75.600	ENSMMUG00000020013	RAD18	100	75.600	Macaca_mulatta
ENSRNOG00000005907	Rad18	100	75.600	ENSMNEG00000013464	RAD18	100	75.600	Macaca_nemestrina
ENSRNOG00000005907	Rad18	100	75.600	ENSMLEG00000014306	RAD18	100	75.800	Mandrillus_leucophaeus
ENSRNOG00000005907	Rad18	67	40.000	ENSMAMG00000023936	rad18	78	40.000	Mastacembelus_armatus
ENSRNOG00000005907	Rad18	73	44.836	ENSMZEG00005010577	rad18	71	44.332	Maylandia_zebra
ENSRNOG00000005907	Rad18	87	51.126	ENSMGAG00000010131	RAD18	91	51.247	Meleagris_gallopavo
ENSRNOG00000005907	Rad18	100	83.401	ENSMAUG00000020642	Rad18	100	83.401	Mesocricetus_auratus
ENSRNOG00000005907	Rad18	98	76.483	ENSMICG00000013536	RAD18	99	76.483	Microcebus_murinus
ENSRNOG00000005907	Rad18	100	80.972	ENSMOCG00000009114	Rad18	100	80.972	Microtus_ochrogaster
ENSRNOG00000005907	Rad18	69	43.158	ENSMMOG00000021793	rad18	97	43.548	Mola_mola
ENSRNOG00000005907	Rad18	99	55.854	ENSMODG00000004679	RAD18	88	60.652	Monodelphis_domestica
ENSRNOG00000005907	Rad18	100	91.600	MGP_CAROLIEiJ_G0028712	Rad18	100	91.200	Mus_caroli
ENSRNOG00000005907	Rad18	100	84.413	ENSMUSG00000030254	Rad18	98	92.739	Mus_musculus
ENSRNOG00000005907	Rad18	100	89.069	MGP_PahariEiJ_G0022463	Rad18	98	93.069	Mus_pahari
ENSRNOG00000005907	Rad18	100	86.561	MGP_SPRETEiJ_G0029740	Rad18	98	93.729	Mus_spretus
ENSRNOG00000005907	Rad18	100	76.447	ENSMPUG00000017063	RAD18	100	76.447	Mustela_putorius_furo
ENSRNOG00000005907	Rad18	100	73.137	ENSMLUG00000016494	RAD18	100	73.137	Myotis_lucifugus
ENSRNOG00000005907	Rad18	100	78.384	ENSNGAG00000012464	Rad18	100	77.980	Nannospalax_galili
ENSRNOG00000005907	Rad18	69	41.779	ENSNBRG00000004794	rad18	96	41.240	Neolamprologus_brichardi
ENSRNOG00000005907	Rad18	100	76.754	ENSNLEG00000003789	RAD18	100	76.754	Nomascus_leucogenys
ENSRNOG00000005907	Rad18	68	52.464	ENSMEUG00000003444	-	82	52.199	Notamacropus_eugenii
ENSRNOG00000005907	Rad18	100	67.800	ENSOPRG00000013856	RAD18	100	67.800	Ochotona_princeps
ENSRNOG00000005907	Rad18	60	78.451	ENSODEG00000018158	RAD18	97	78.451	Octodon_degus
ENSRNOG00000005907	Rad18	73	46.486	ENSONIG00000018979	rad18	82	45.946	Oreochromis_niloticus
ENSRNOG00000005907	Rad18	100	72.255	ENSOCUG00000000013	RAD18	100	72.255	Oryctolagus_cuniculus
ENSRNOG00000005907	Rad18	70	39.467	ENSORLG00000029026	rad18	96	39.840	Oryzias_latipes
ENSRNOG00000005907	Rad18	100	75.992	ENSOGAG00000001410	RAD18	100	75.992	Otolemur_garnettii
ENSRNOG00000005907	Rad18	100	74.308	ENSOARG00000007445	RAD18	100	74.308	Ovis_aries
ENSRNOG00000005907	Rad18	100	76.600	ENSPPAG00000035797	RAD18	100	76.800	Pan_paniscus
ENSRNOG00000005907	Rad18	100	76.846	ENSPPRG00000004021	RAD18	100	76.846	Panthera_pardus
ENSRNOG00000005907	Rad18	100	76.846	ENSPTIG00000008602	RAD18	100	76.846	Panthera_tigris_altaica
ENSRNOG00000005907	Rad18	100	76.200	ENSPTRG00000014583	RAD18	100	76.400	Pan_troglodytes
ENSRNOG00000005907	Rad18	100	75.400	ENSPANG00000008855	RAD18	100	75.600	Papio_anubis
ENSRNOG00000005907	Rad18	99	51.004	ENSPSIG00000006928	RAD18	99	51.004	Pelodiscus_sinensis
ENSRNOG00000005907	Rad18	63	43.750	ENSPMGG00000013294	rad18	95	40.000	Periophthalmus_magnuspinnatus
ENSRNOG00000005907	Rad18	100	81.377	ENSPEMG00000022129	Rad18	100	81.377	Peromyscus_maniculatus_bairdii
ENSRNOG00000005907	Rad18	86	61.149	ENSPCIG00000024872	RAD18	92	61.021	Phascolarctos_cinereus
ENSRNOG00000005907	Rad18	70	43.700	ENSPFOG00000002722	rad18	98	43.968	Poecilia_formosa
ENSRNOG00000005907	Rad18	100	76.400	ENSPPYG00000013688	RAD18	100	76.600	Pongo_abelii
ENSRNOG00000005907	Rad18	93	59.529	ENSPCAG00000008229	RAD18	100	59.529	Procavia_capensis
ENSRNOG00000005907	Rad18	100	77.108	ENSPVAG00000012220	RAD18	100	77.108	Pteropus_vampyrus
ENSRNOG00000005907	Rad18	73	44.836	ENSPNYG00000006815	rad18	76	44.332	Pundamilia_nyererei
ENSRNOG00000005907	Rad18	74	43.152	ENSPNAG00000016082	rad18	84	42.228	Pygocentrus_nattereri
ENSRNOG00000005907	Rad18	100	74.850	ENSRBIG00000044173	RAD18	100	74.850	Rhinopithecus_bieti
ENSRNOG00000005907	Rad18	100	76.600	ENSRROG00000043948	RAD18	100	76.600	Rhinopithecus_roxellana
ENSRNOG00000005907	Rad18	100	76.200	ENSSBOG00000008434	-	100	76.400	Saimiri_boliviensis_boliviensis
ENSRNOG00000005907	Rad18	81	58.765	ENSSHAG00000012472	-	100	58.765	Sarcophilus_harrisii
ENSRNOG00000005907	Rad18	77	43.750	ENSSFOG00015019264	rad18	80	44.987	Scleropages_formosus
ENSRNOG00000005907	Rad18	60	58.983	ENSSPUG00000017486	RAD18	97	58.983	Sphenodon_punctatus
ENSRNOG00000005907	Rad18	77	42.410	ENSSPAG00000007165	rad18	83	42.651	Stegastes_partitus
ENSRNOG00000005907	Rad18	100	75.100	ENSSSCG00000026158	RAD18	100	75.100	Sus_scrofa
ENSRNOG00000005907	Rad18	73	54.743	ENSTGUG00000010405	RAD18	82	54.743	Taeniopygia_guttata
ENSRNOG00000005907	Rad18	68	43.503	ENSTRUG00000003517	rad18	97	42.416	Takifugu_rubripes
ENSRNOG00000005907	Rad18	71	47.554	ENSTNIG00000014625	rad18	99	47.011	Tetraodon_nigroviridis
ENSRNOG00000005907	Rad18	100	76.707	ENSTTRG00000005034	RAD18	100	76.707	Tursiops_truncatus
ENSRNOG00000005907	Rad18	57	60.777	ENSUAMG00000009763	-	84	60.777	Ursus_americanus
ENSRNOG00000005907	Rad18	100	76.846	ENSUMAG00000019279	RAD18	100	76.846	Ursus_maritimus
ENSRNOG00000005907	Rad18	91	70.861	ENSVPAG00000002063	RAD18	100	71.398	Vicugna_pacos
ENSRNOG00000005907	Rad18	100	74.553	ENSVVUG00000025318	RAD18	100	74.553	Vulpes_vulpes
ENSRNOG00000005907	Rad18	74	53.003	ENSXETG00000033878	RAD18	100	53.230	Xenopus_tropicalis
ENSRNOG00000005907	Rad18	70	39.314	ENSXCOG00000020018	rad18	95	39.050	Xiphophorus_couchianus
ENSRNOG00000005907	Rad18	70	39.842	ENSXMAG00000001516	rad18	95	39.314	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000403	Y-form DNA binding	-	IEA	Function
GO:0000403	Y-form DNA binding	-	ISO	Function
GO:0000785	chromatin	-	ISO	Component
GO:0001741	XY body	-	ISO	Component
GO:0003674	molecular_function	-	ND	Function
GO:0003697	single-stranded DNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005657	replication fork	-	IEA	Component
GO:0005657	replication fork	-	ISO	Component
GO:0005813	centrosome	-	IEA	Component
GO:0005813	centrosome	-	ISO	Component
GO:0006301	postreplication repair	21873635.	IBA	Process
GO:0006513	protein monoubiquitination	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0009411	response to UV	21873635.	IBA	Process
GO:0009411	response to UV	-	ISO	Process
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0031593	polyubiquitin modification-dependent protein binding	-	IEA	Function
GO:0031593	polyubiquitin modification-dependent protein binding	-	ISO	Function
GO:0031625	ubiquitin protein ligase binding	-	IEA	Function
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0035861	site of double-strand break	-	IEA	Component
GO:0035861	site of double-strand break	-	ISO	Component
GO:0042405	nuclear inclusion body	-	IEA	Component
GO:0042405	nuclear inclusion body	-	ISO	Component
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043142	single-stranded DNA-dependent ATPase activity	21873635.	IBA	Function
GO:0044877	protein-containing complex binding	-	IEA	Function
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045910	negative regulation of DNA recombination	-	ISO	Process
GO:0051865	protein autoubiquitination	-	IEA	Process
GO:0051865	protein autoubiquitination	-	ISO	Process
GO:0051984	positive regulation of chromosome segregation	-	IEA	Process
GO:0051984	positive regulation of chromosome segregation	-	ISO	Process
GO:0060548	negative regulation of cell death	-	IEA	Process
GO:0060548	negative regulation of cell death	-	ISO	Process
GO:0061630	ubiquitin protein ligase activity	21873635.	IBA	Function
GO:0097505	Rad6-Rad18 complex	21873635.	IBA	Component