EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000006122 (Gene tree)
Gene ID: 303477
Gene Symbol: Igf2bp1
Alias: IMP-1|Imp1|ZBP1|rZBP-1
Full Name: insulin-like growth factor 2 mRNA binding protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 42794 bases
Position: chr10:83780203-83822996
Accession: 708580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000008139	KH_1	PF00013.29	2.7e-56	1	4
ENSRNOP00000008139	KH_1	PF00013.29	2.7e-56	2	4
ENSRNOP00000008139	KH_1	PF00013.29	2.7e-56	3	4
ENSRNOP00000008139	KH_1	PF00013.29	2.7e-56	4	4
ENSRNOP00000008139	RRM_1	PF00076.22	1.1e-16	1	2
ENSRNOP00000008139	RRM_1	PF00076.22	1.1e-16	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000008139	-	2105	XM_006247193	ENSRNOP00000008139	577 (aa)	XP_006247255	Q8CGX0

Gene Model

Click here to download ENSRNOG00000006122's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05206	MicroRNAs in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000006122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000006122	Igf2bp1	96	65.292	ENSRNOG00000025946	Igf2bp2	99	65.340
ENSRNOG00000006122	Igf2bp1	100	73.333	ENSRNOG00000009052	Igf2bp3	100	72.899
ENSRNOG00000006122	Igf2bp1	59	33.582	ENSRNOG00000001245	Pcbp3	94	33.582
ENSRNOG00000006122	Igf2bp1	59	30.597	ENSRNOG00000012406	Pcbp4	73	32.800

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSG00000159217	IGF2BP1	100	100.000	Homo_sapiens
ENSRNOG00000006122	Igf2bp1	100	98.960	ENSAMEG00000005087	IGF2BP1	97	98.960	Ailuropoda_melanoleuca
ENSRNOG00000006122	Igf2bp1	90	94.242	ENSAPLG00000012620	IGF2BP1	100	94.242	Anas_platyrhynchos
ENSRNOG00000006122	Igf2bp1	100	93.934	ENSACAG00000006199	IGF2BP1	100	93.934	Anolis_carolinensis
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSANAG00000022606	IGF2BP1	100	100.000	Aotus_nancymaae
ENSRNOG00000006122	Igf2bp1	100	99.133	ENSBTAG00000011736	IGF2BP1	100	99.133	Bos_taurus
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSCJAG00000007258	IGF2BP1	100	100.000	Callithrix_jacchus
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSCAFG00000016907	IGF2BP1	100	99.480	Canis_familiaris
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSCAFG00020023369	IGF2BP1	100	99.480	Canis_lupus_dingo
ENSRNOG00000006122	Igf2bp1	100	99.133	ENSCHIG00000022316	IGF2BP1	100	99.133	Capra_hircus
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSTSYG00000003912	IGF2BP1	100	100.000	Carlito_syrichta
ENSRNOG00000006122	Igf2bp1	76	98.186	ENSCAPG00000008985	IGF2BP1	100	98.186	Cavia_aperea
ENSRNOG00000006122	Igf2bp1	95	98.355	ENSCPOG00000020174	IGF2BP1	100	98.355	Cavia_porcellus
ENSRNOG00000006122	Igf2bp1	100	96.360	ENSCCAG00000031817	IGF2BP1	100	96.360	Cebus_capucinus
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSCATG00000041707	IGF2BP1	100	100.000	Cercocebus_atys
ENSRNOG00000006122	Igf2bp1	100	98.094	ENSCLAG00000015853	IGF2BP1	100	98.094	Chinchilla_lanigera
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSCSAG00000002487	IGF2BP1	100	99.653	Chlorocebus_sabaeus
ENSRNOG00000006122	Igf2bp1	84	81.328	ENSCHOG00000002349	IGF2BP1	100	81.328	Choloepus_hoffmanni
ENSRNOG00000006122	Igf2bp1	100	84.575	ENSCPBG00000027315	IGF2BP1	100	84.229	Chrysemys_picta_bellii
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSCANG00000032567	IGF2BP1	100	100.000	Colobus_angolensis_palliatus
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSCGRG00001000282	-	100	99.653	Cricetulus_griseus_chok1gshd
ENSRNOG00000006122	Igf2bp1	90	89.038	ENSCGRG00001006706	-	97	85.326	Cricetulus_griseus_chok1gshd
ENSRNOG00000006122	Igf2bp1	76	84.354	ENSCGRG00001003571	-	100	86.621	Cricetulus_griseus_chok1gshd
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSCGRG00000014555	Igf2bp1	100	99.653	Cricetulus_griseus_crigri
ENSRNOG00000006122	Igf2bp1	100	96.014	ENSDNOG00000006801	IGF2BP1	100	96.014	Dasypus_novemcinctus
ENSRNOG00000006122	Igf2bp1	100	91.161	ENSDORG00000014371	Igf2bp1	100	91.161	Dipodomys_ordii
ENSRNOG00000006122	Igf2bp1	90	80.502	ENSETEG00000003370	IGF2BP1	100	79.537	Echinops_telfairi
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSEASG00005000301	IGF2BP1	100	99.307	Equus_asinus_asinus
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSECAG00000009723	IGF2BP1	100	99.307	Equus_caballus
ENSRNOG00000006122	Igf2bp1	100	85.269	ENSEEUG00000010947	IGF2BP1	100	85.269	Erinaceus_europaeus
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSFCAG00000002454	IGF2BP1	100	100.000	Felis_catus
ENSRNOG00000006122	Igf2bp1	87	61.209	ENSFALG00000011366	IGF2BP1	100	61.726	Ficedula_albicollis
ENSRNOG00000006122	Igf2bp1	97	93.506	ENSFDAG00000017420	IGF2BP1	100	93.506	Fukomys_damarensis
ENSRNOG00000006122	Igf2bp1	100	94.281	ENSGALG00000041204	IGF2BP1	100	94.281	Gallus_gallus
ENSRNOG00000006122	Igf2bp1	76	85.235	ENSGAGG00000021663	IGF2BP1	100	85.235	Gopherus_agassizii
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSGGOG00000008872	IGF2BP1	100	100.000	Gorilla_gorilla
ENSRNOG00000006122	Igf2bp1	100	98.440	ENSHGLG00000010492	IGF2BP1	100	98.440	Heterocephalus_glaber_female
ENSRNOG00000006122	Igf2bp1	100	98.440	ENSHGLG00100006606	IGF2BP1	100	98.440	Heterocephalus_glaber_male
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSSTOG00000010643	IGF2BP1	100	99.480	Ictidomys_tridecemlineatus
ENSRNOG00000006122	Igf2bp1	100	98.614	ENSJJAG00000002687	Igf2bp1	100	98.614	Jaculus_jaculus
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSLAFG00000002048	IGF2BP1	100	99.307	Loxodonta_africana
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSMFAG00000001613	IGF2BP1	100	100.000	Macaca_fascicularis
ENSRNOG00000006122	Igf2bp1	86	100.000	ENSMMUG00000011533	IGF2BP1	100	100.000	Macaca_mulatta
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSMNEG00000033825	IGF2BP1	100	100.000	Macaca_nemestrina
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSMLEG00000026086	IGF2BP1	100	100.000	Mandrillus_leucophaeus
ENSRNOG00000006122	Igf2bp1	81	94.839	ENSMGAG00000002497	IGF2BP1	100	94.839	Meleagris_gallopavo
ENSRNOG00000006122	Igf2bp1	100	93.068	ENSMICG00000013324	-	100	99.259	Microcebus_murinus
ENSRNOG00000006122	Igf2bp1	77	80.180	ENSMICG00000043511	-	99	80.180	Microcebus_murinus
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSMOCG00000010232	Igf2bp1	100	99.653	Microtus_ochrogaster
ENSRNOG00000006122	Igf2bp1	100	97.227	ENSMODG00000012268	IGF2BP1	100	97.227	Monodelphis_domestica
ENSRNOG00000006122	Igf2bp1	100	99.307	MGP_CAROLIEiJ_G0017016	Igf2bp1	100	99.307	Mus_caroli
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSMUSG00000013415	Igf2bp1	100	99.307	Mus_musculus
ENSRNOG00000006122	Igf2bp1	100	99.307	MGP_SPRETEiJ_G0017862	Igf2bp1	100	99.307	Mus_spretus
ENSRNOG00000006122	Igf2bp1	87	94.466	ENSMPUG00000015358	IGF2BP1	100	94.466	Mustela_putorius_furo
ENSRNOG00000006122	Igf2bp1	83	73.542	ENSMLUG00000023642	-	100	73.542	Myotis_lucifugus
ENSRNOG00000006122	Igf2bp1	71	95.332	ENSMLUG00000016891	-	100	95.332	Myotis_lucifugus
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSNGAG00000015679	Igf2bp1	100	99.653	Nannospalax_galili
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSNLEG00000002786	IGF2BP1	100	100.000	Nomascus_leucogenys
ENSRNOG00000006122	Igf2bp1	79	97.872	ENSMEUG00000002152	-	84	97.872	Notamacropus_eugenii
ENSRNOG00000006122	Igf2bp1	90	94.208	ENSOPRG00000010207	IGF2BP1	100	94.208	Ochotona_princeps
ENSRNOG00000006122	Igf2bp1	86	78.758	ENSODEG00000014533	-	92	78.758	Octodon_degus
ENSRNOG00000006122	Igf2bp1	100	98.960	ENSODEG00000016991	-	100	98.960	Octodon_degus
ENSRNOG00000006122	Igf2bp1	63	83.196	ENSOANG00000014859	-	100	81.301	Ornithorhynchus_anatinus
ENSRNOG00000006122	Igf2bp1	99	99.123	ENSOCUG00000004411	IGF2BP1	100	99.123	Oryctolagus_cuniculus
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSOGAG00000001270	IGF2BP1	100	99.307	Otolemur_garnettii
ENSRNOG00000006122	Igf2bp1	100	98.787	ENSOARG00000006509	IGF2BP1	100	98.787	Ovis_aries
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSPPAG00000040224	IGF2BP1	100	99.480	Pan_paniscus
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSPPRG00000008067	IGF2BP1	100	100.000	Panthera_pardus
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSPTIG00000013291	IGF2BP1	100	100.000	Panthera_tigris_altaica
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSPTRG00000009368	IGF2BP1	100	99.480	Pan_troglodytes
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSPANG00000022833	IGF2BP1	100	100.000	Papio_anubis
ENSRNOG00000006122	Igf2bp1	86	81.673	ENSPSIG00000005175	IGF2BP1	100	81.673	Pelodiscus_sinensis
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSPEMG00000021974	Igf2bp1	100	99.307	Peromyscus_maniculatus_bairdii
ENSRNOG00000006122	Igf2bp1	100	97.227	ENSPCIG00000013111	IGF2BP1	100	97.227	Phascolarctos_cinereus
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSPPYG00000008913	IGF2BP1	100	99.653	Pongo_abelii
ENSRNOG00000006122	Igf2bp1	100	90.641	ENSPCAG00000016601	IGF2BP1	100	90.641	Procavia_capensis
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSPCOG00000006475	IGF2BP1	100	99.307	Propithecus_coquereli
ENSRNOG00000006122	Igf2bp1	100	79.239	ENSPVAG00000001718	IGF2BP1	100	79.239	Pteropus_vampyrus
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSRBIG00000035739	IGF2BP1	100	100.000	Rhinopithecus_bieti
ENSRNOG00000006122	Igf2bp1	100	99.653	ENSRROG00000039581	IGF2BP1	100	100.000	Rhinopithecus_roxellana
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSSBOG00000020973	IGF2BP1	100	99.480	Saimiri_boliviensis_boliviensis
ENSRNOG00000006122	Igf2bp1	100	97.054	ENSSHAG00000014259	IGF2BP1	100	97.054	Sarcophilus_harrisii
ENSRNOG00000006122	Igf2bp1	66	90.461	ENSSARG00000013201	-	73	90.461	Sorex_araneus
ENSRNOG00000006122	Igf2bp1	100	91.696	ENSSPUG00000006526	IGF2BP1	100	91.696	Sphenodon_punctatus
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSSSCG00000023128	-	100	99.307	Sus_scrofa
ENSRNOG00000006122	Igf2bp1	100	67.820	ENSSSCG00000001827	-	100	67.820	Sus_scrofa
ENSRNOG00000006122	Igf2bp1	100	80.069	ENSTBEG00000004254	IGF2BP1	100	80.069	Tupaia_belangeri
ENSRNOG00000006122	Igf2bp1	100	96.014	ENSTTRG00000007197	IGF2BP1	100	96.014	Tursiops_truncatus
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSUAMG00000023269	IGF2BP1	100	99.480	Ursus_americanus
ENSRNOG00000006122	Igf2bp1	100	99.307	ENSUMAG00000015682	IGF2BP1	100	99.307	Ursus_maritimus
ENSRNOG00000006122	Igf2bp1	78	88.053	ENSVPAG00000007657	IGF2BP1	83	88.053	Vicugna_pacos
ENSRNOG00000006122	Igf2bp1	100	99.480	ENSVVUG00000003451	IGF2BP1	100	99.480	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	-	ISO	Function
GO:0003729	mRNA binding	-	ISS	Function
GO:0003730	mRNA 3'-UTR binding	14614102.	IDA	Function
GO:0003730	mRNA 3'-UTR binding	-	ISO	Function
GO:0003730	mRNA 3'-UTR binding	-	ISS	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006403	RNA localization	14614102.	IMP	Process
GO:0010494	cytoplasmic stress granule	-	ISO	Component
GO:0010494	cytoplasmic stress granule	-	ISS	Component
GO:0010610	regulation of mRNA stability involved in response to stress	-	ISO	Process
GO:0010610	regulation of mRNA stability involved in response to stress	-	ISS	Process
GO:0017148	negative regulation of translation	-	IEA	Process
GO:0017148	negative regulation of translation	-	ISO	Process
GO:0022013	pallium cell proliferation in forebrain	-	IEA	Process
GO:0022013	pallium cell proliferation in forebrain	-	ISO	Process
GO:0030027	lamellipodium	-	IEA	Component
GO:0030175	filopodium	-	IEA	Component
GO:0030425	dendrite	14614102.	IDA	Component
GO:0030426	growth cone	-	IEA	Component
GO:0043197	dendritic spine	-	IEA	Component
GO:0045182	translation regulator activity	-	IEA	Function
GO:0045182	translation regulator activity	-	ISO	Function
GO:0048027	mRNA 5'-UTR binding	-	IEA	Function
GO:0048027	mRNA 5'-UTR binding	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0051028	mRNA transport	-	IEA	Process
GO:0070934	CRD-mediated mRNA stabilization	-	IEA	Process
GO:0070934	CRD-mediated mRNA stabilization	-	ISO	Process
GO:0070937	CRD-mediated mRNA stability complex	-	ISO	Component
GO:0070937	CRD-mediated mRNA stability complex	-	ISS	Component
GO:0097150	neuronal stem cell population maintenance	-	IEA	Process
GO:0097150	neuronal stem cell population maintenance	-	ISO	Process
GO:1990904	ribonucleoprotein complex	-	ISO	Component
GO:1990904	ribonucleoprotein complex	-	ISS	Component