EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000006130 (Gene tree)
Gene ID
288779
Gene Symbol
Rab5b
Alias
LOC288779
Full Name
RAB5B%2C member RAS oncogene family
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
18747 bases
Position
chr7:3104551-3123297
Accession
1306489
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000058595MMR_HSR1PF01926.230.0001511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000061878-3250XM_006240750ENSRNOP00000058595215 (aa)XP_006240812A1L1J8
Gene Model
Click here to download ENSRNOG00000006130's gene model file
Pathways
Pathway IDPathway NameSource
rno04014Ras signaling pathwayKEGG
rno04144EndocytosisKEGG
rno04145PhagosomeKEGG
rno04962Vasopressin-regulated water reabsorptionKEGG
rno05146AmoebiasisKEGG
rno05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000006130's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000006130Rab5b9147.449ENSRNOG00000042189Rab319847.449
ENSRNOG00000006130Rab5b7842.857ENSRNOG00000010224Rab308342.857
ENSRNOG00000006130Rab5b8232.787ENSRNOG00000016611Hras9333.146
ENSRNOG00000006130Rab5b9043.367ENSRNOG00000004992Rab1a9543.367
ENSRNOG00000006130Rab5b7437.195ENSRNOG00000013947Rabl26437.195
ENSRNOG00000006130Rab5b9140.777ENSRNOG00000007648Rab11b9440.777
ENSRNOG00000006130Rab5b9141.176ENSRNOG00000011302Rab11a9441.176
ENSRNOG00000006130Rab5b7745.181ENSRNOG00000018176Rab6a8045.181
ENSRNOG00000006130Rab5b8936.458ENSRNOG00000016733Rab139536.458
ENSRNOG00000006130Rab5b6230.986ENSRNOG00000005988Arl8a7330.986
ENSRNOG00000006130Rab5b9034.826ENSRNOG00000047960Rab9b9734.826
ENSRNOG00000006130Rab5b7545.963ENSRNOG00000023640Rab257645.963
ENSRNOG00000006130Rab5b8036.994ENSRNOG00000019295Rab127136.994
ENSRNOG00000006130Rab5b8141.899ENSRNOG00000012247Rab7a9541.899
ENSRNOG00000006130Rab5b9335.294ENSRNOG00000030443Rab9a9935.294
ENSRNOG00000006130Rab5b7745.783ENSRNOG00000009198Rab6b8045.783
ENSRNOG00000006130Rab5b7335.625ENSRNOG00000001311Rab366035.625
ENSRNOG00000006130Rab5b9786.124ENSRNOG00000018568Rab5c9786.124
ENSRNOG00000006130Rab5b9036.923ENSRNOG00000022014Rab358339.881
ENSRNOG00000006130Rab5b6230.986ENSRNOG00000055860Arl8b7330.986
ENSRNOG00000006130Rab5b8036.842ENSRNOG00000007364Rab158136.842
ENSRNOG00000006130Rab5b9038.278ENSRNOG00000012488Rab2b9738.278
ENSRNOG00000006130Rab5b7544.720ENSRNOG00000018901Rab147544.720
ENSRNOG00000006130Rab5b9039.086ENSRNOG00000018972Rab189339.086
ENSRNOG00000006130Rab5b8031.285ENSRNOG00000009338Kras9431.285
ENSRNOG00000006130Rab5b7543.478ENSRNOG00000005963Rab2a7843.478
ENSRNOG00000006130Rab5b8132.386ENSRNOG00000050578Rheb9332.386
ENSRNOG00000006130Rab5b7538.554ENSRNOG00000006698Rab33a7038.554
ENSRNOG00000006130Rab5b7532.515ENSRNOG00000023079Nras8532.515
ENSRNOG00000006130Rab5b7438.125ENSRNOG00000012629Rab236738.125
ENSRNOG00000006130Rab5b9048.454ENSRNOG00000005762Rab22a9848.454
ENSRNOG00000006130Rab5b8245.763ENSRNOG00000050510LOC1025551678745.763
ENSRNOG00000006130Rab5b8139.444ENSRNOG00000013035Rab33b7739.444
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000006130Rab5b10099.070ENSG00000111540RAB5B100100.000Homo_sapiens
ENSRNOG00000006130Rab5b10097.696ENSAMEG00000003196RAB5B10097.696Ailuropoda_melanoleuca
ENSRNOG00000006130Rab5b10095.814ENSACAG00000005380RAB5B10095.814Anolis_carolinensis
ENSRNOG00000006130Rab5b10099.070ENSANAG00000033215RAB5B9599.070Aotus_nancymaae
ENSRNOG00000006130Rab5b10098.605ENSBTAG00000014129RAB5B10098.605Bos_taurus
ENSRNOG00000006130Rab5b10099.070ENSCJAG00000041780RAB5B9599.070Callithrix_jacchus
ENSRNOG00000006130Rab5b10099.070ENSCAFG00000000087RAB5B10099.070Canis_familiaris
ENSRNOG00000006130Rab5b10099.070ENSCAFG00020026094RAB5B10099.070Canis_lupus_dingo
ENSRNOG00000006130Rab5b9799.038ENSCHIG00000010333RAB5B9699.038Capra_hircus
ENSRNOG00000006130Rab5b10098.605ENSTSYG00000009576RAB5B10098.605Carlito_syrichta
ENSRNOG00000006130Rab5b10099.070ENSCPOG00000034818RAB5B10099.070Cavia_porcellus
ENSRNOG00000006130Rab5b10098.140ENSCCAG00000019480RAB5B10098.140Cebus_capucinus
ENSRNOG00000006130Rab5b8399.441ENSCATG00000034978RAB5B9899.441Cercocebus_atys
ENSRNOG00000006130Rab5b10098.140ENSCSAG00000005277RAB5B10098.140Chlorocebus_sabaeus
ENSRNOG00000006130Rab5b10096.279ENSCPBG00000012712RAB5B10096.279Chrysemys_picta_bellii
ENSRNOG00000006130Rab5b10098.605ENSCGRG00001000428Rab5b10098.605Cricetulus_griseus_chok1gshd
ENSRNOG00000006130Rab5b10098.605ENSCGRG00000009508-10098.605Cricetulus_griseus_crigri
ENSRNOG00000006130Rab5b10099.070ENSDORG00000025063Rab5b10099.070Dipodomys_ordii
ENSRNOG00000006130Rab5b10099.535ENSECAG00000023306RAB5B10099.535Equus_caballus
ENSRNOG00000006130Rab5b10098.140ENSEEUG00000006745RAB5B10098.140Erinaceus_europaeus
ENSRNOG00000006130Rab5b10099.070ENSFDAG00000008326RAB5B10099.070Fukomys_damarensis
ENSRNOG00000006130Rab5b10098.140ENSHGLG00000005995RAB5B10098.140Heterocephalus_glaber_female
ENSRNOG00000006130Rab5b10098.140ENSHGLG00100012955RAB5B10098.140Heterocephalus_glaber_male
ENSRNOG00000006130Rab5b10097.674ENSSTOG00000010536RAB5B10097.674Ictidomys_tridecemlineatus
ENSRNOG00000006130Rab5b10099.070ENSJJAG00000019506Rab5b10099.070Jaculus_jaculus
ENSRNOG00000006130Rab5b10098.157ENSLAFG00000018009RAB5B9598.157Loxodonta_africana
ENSRNOG00000006130Rab5b10098.140ENSMFAG00000029992RAB5B10098.140Macaca_fascicularis
ENSRNOG00000006130Rab5b10098.140ENSMMUG00000031853RAB5B10098.140Macaca_mulatta
ENSRNOG00000006130Rab5b10098.140ENSMNEG00000005338RAB5B10098.140Macaca_nemestrina
ENSRNOG00000006130Rab5b10098.140ENSMLEG00000034462RAB5B10098.140Mandrillus_leucophaeus
ENSRNOG00000006130Rab5b10099.070ENSMAUG00000011613Rab5b10099.070Mesocricetus_auratus
ENSRNOG00000006130Rab5b10098.605ENSMICG00000011086RAB5B10098.605Microcebus_murinus
ENSRNOG00000006130Rab5b10099.070ENSMUSG00000000711Rab5b10099.070Mus_musculus
ENSRNOG00000006130Rab5b10099.070MGP_PahariEiJ_G0031135Rab5b10099.070Mus_pahari
ENSRNOG00000006130Rab5b10098.605MGP_SPRETEiJ_G0016774Rab5b10098.605Mus_spretus
ENSRNOG00000006130Rab5b9997.685ENSMPUG00000000946RAB5B8997.685Mustela_putorius_furo
ENSRNOG00000006130Rab5b10099.070ENSNLEG00000017570-10099.070Nomascus_leucogenys
ENSRNOG00000006130Rab5b10099.070ENSOPRG00000007883RAB5B10099.070Ochotona_princeps
ENSRNOG00000006130Rab5b10098.605ENSODEG00000003860RAB5B10098.605Octodon_degus
ENSRNOG00000006130Rab5b10099.070ENSOCUG00000013895RAB5B9599.070Oryctolagus_cuniculus
ENSRNOG00000006130Rab5b10099.070ENSOARG00000010651RAB5B9599.070Ovis_aries
ENSRNOG00000006130Rab5b10099.070ENSPPAG00000035431RAB5B10099.070Pan_paniscus
ENSRNOG00000006130Rab5b10099.070ENSPTRG00000005071RAB5B9798.565Pan_troglodytes
ENSRNOG00000006130Rab5b9997.196ENSPANG00000021075RAB5B9797.196Papio_anubis
ENSRNOG00000006130Rab5b10099.070ENSPCOG00000016461RAB5B10099.070Propithecus_coquereli
ENSRNOG00000006130Rab5b10098.140ENSRBIG00000013165RAB5B10098.140Rhinopithecus_bieti
ENSRNOG00000006130Rab5b10098.140ENSRROG00000037973RAB5B10098.140Rhinopithecus_roxellana
ENSRNOG00000006130Rab5b10082.791ENSSBOG00000035419RAB5B10082.791Saimiri_boliviensis_boliviensis
ENSRNOG00000006130Rab5b10098.140ENSSHAG00000007727RAB5B10098.140Sarcophilus_harrisii
ENSRNOG00000006130Rab5b10099.070ENSSARG00000006237RAB5B10099.070Sorex_araneus
ENSRNOG00000006130Rab5b10095.814ENSSPUG00000014873RAB5B10095.814Sphenodon_punctatus
ENSRNOG00000006130Rab5b10099.070ENSTTRG00000015001RAB5B10099.070Tursiops_truncatus
ENSRNOG00000006130Rab5b10098.605ENSUAMG00000014651RAB5B10098.605Ursus_americanus
ENSRNOG00000006130Rab5b10098.605ENSUMAG00000016263RAB5B10098.605Ursus_maritimus
ENSRNOG00000006130Rab5b68100.000ENSVVUG00000022054RAB5B81100.000Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003924GTPase activity21873635.IBAFunction
GO:0003924GTPase activity-ISOFunction
GO:0005525GTP binding-IEAFunction
GO:0005768endosome21873635.IBAComponent
GO:0005768endosome-ISOComponent
GO:0005769early endosome21873635.IBAComponent
GO:0005886plasma membrane21873635.IBAComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0006897endocytosis21873635.IBAProcess
GO:0007032endosome organization-IEAProcess
GO:0007032endosome organization-ISOProcess
GO:0019003GDP binding-IEAFunction
GO:0019003GDP binding-ISOFunction
GO:0019882antigen processing and presentation-IEAProcess
GO:0019882antigen processing and presentation-ISOProcess
GO:0030100regulation of endocytosis21873635.IBAProcess
GO:0030100regulation of endocytosis-ISOProcess
GO:0030139endocytic vesicle21873635.IBAComponent
GO:0030139endocytic vesicle-ISOComponent
GO:0030742GTP-dependent protein binding-IEAFunction
GO:0030742GTP-dependent protein binding-ISOFunction
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0043231intracellular membrane-bounded organelle-IEAComponent
GO:0043231intracellular membrane-bounded organelle-ISOComponent
GO:0048227plasma membrane to endosome transport-IEAProcess
GO:0048227plasma membrane to endosome transport-ISOProcess
GO:0070062extracellular exosome-IEAComponent
GO:0070062extracellular exosome-ISOComponent
GO:0070382exocytic vesicle-ISOComponent
GO:0098993anchored component of synaptic vesicle membrane20926670.EXPComponent
GO:0098993anchored component of synaptic vesicle membrane20926670.IDAComponent

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