EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000006261 (Gene tree)
Gene ID: 305586
Gene Symbol: Papolg
Alias: LOC305586
Full Name: poly(A) polymerase gamma
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 34013 bases
Position: chr14:108624359-108658371
Accession: 1310337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000008919	PAP_RNA-bind	PF04926.15	1.1e-27	1	2
ENSRNOP00000008919	PAP_RNA-bind	PF04926.15	1.1e-27	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000008919	-	3725	-	ENSRNOP00000008919	739 (aa)	-	D3ZAN6

Gene Model

Click here to download ENSRNOG00000006261's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000006261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000006261	Papolg	99	60.676	ENSRNOG00000004827	Papola	98	60.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000006261	Papolg	100	93.117	ENSG00000115421	PAPOLG	100	99.145	Homo_sapiens
ENSRNOG00000006261	Papolg	100	72.437	ENSAPOG00000004798	papolg	99	70.676	Acanthochromis_polyacanthus
ENSRNOG00000006261	Papolg	99	93.902	ENSAMEG00000018227	PAPOLG	100	94.038	Ailuropoda_melanoleuca
ENSRNOG00000006261	Papolg	100	69.880	ENSACIG00000010546	papolg	99	70.580	Amphilophus_citrinellus
ENSRNOG00000006261	Papolg	100	72.570	ENSAOCG00000010254	papolg	89	72.836	Amphiprion_ocellaris
ENSRNOG00000006261	Papolg	100	72.703	ENSAPEG00000006944	papolg	89	72.969	Amphiprion_percula
ENSRNOG00000006261	Papolg	100	73.200	ENSATEG00000009007	papolg	97	70.758	Anabas_testudineus
ENSRNOG00000006261	Papolg	99	73.510	ENSAPLG00000006813	PAPOLG	99	73.510	Anas_platyrhynchos
ENSRNOG00000006261	Papolg	81	62.806	ENSACAG00000015048	-	100	62.806	Anolis_carolinensis
ENSRNOG00000006261	Papolg	100	93.387	ENSANAG00000024627	PAPOLG	100	93.387	Aotus_nancymaae
ENSRNOG00000006261	Papolg	100	70.169	ENSACLG00000015592	papolg	89	70.817	Astatotilapia_calliptera
ENSRNOG00000006261	Papolg	100	73.245	ENSAMXG00000004611	papolg	100	73.245	Astyanax_mexicanus
ENSRNOG00000006261	Papolg	100	94.332	ENSBTAG00000007414	PAPOLG	100	94.332	Bos_taurus
ENSRNOG00000006261	Papolg	100	93.657	ENSCJAG00000009102	PAPOLG	100	93.657	Callithrix_jacchus
ENSRNOG00000006261	Papolg	100	93.522	ENSCAFG00000002975	PAPOLG	100	85.086	Canis_familiaris
ENSRNOG00000006261	Papolg	100	92.102	ENSCAFG00020026859	PAPOLG	100	93.039	Canis_lupus_dingo
ENSRNOG00000006261	Papolg	100	94.467	ENSCHIG00000015082	PAPOLG	100	94.467	Capra_hircus
ENSRNOG00000006261	Papolg	100	93.522	ENSTSYG00000004947	PAPOLG	100	93.522	Carlito_syrichta
ENSRNOG00000006261	Papolg	51	91.579	ENSCAPG00000014901	-	99	91.579	Cavia_aperea
ENSRNOG00000006261	Papolg	100	94.189	ENSCPOG00000010306	PAPOLG	100	94.189	Cavia_porcellus
ENSRNOG00000006261	Papolg	100	93.792	ENSCCAG00000026893	PAPOLG	100	93.792	Cebus_capucinus
ENSRNOG00000006261	Papolg	91	97.835	ENSCATG00000044395	PAPOLG	100	97.835	Cercocebus_atys
ENSRNOG00000006261	Papolg	100	94.737	ENSCLAG00000008603	PAPOLG	100	94.737	Chinchilla_lanigera
ENSRNOG00000006261	Papolg	100	93.522	ENSCSAG00000014408	PAPOLG	100	93.522	Chlorocebus_sabaeus
ENSRNOG00000006261	Papolg	89	90.592	ENSCHOG00000014028	PAPOLG	100	90.592	Choloepus_hoffmanni
ENSRNOG00000006261	Papolg	68	64.752	ENSCING00000024664	-	94	64.752	Ciona_intestinalis
ENSRNOG00000006261	Papolg	65	65.567	ENSCSAVG00000009085	-	97	65.567	Ciona_savignyi
ENSRNOG00000006261	Papolg	100	93.657	ENSCANG00000038120	PAPOLG	100	93.657	Colobus_angolensis_palliatus
ENSRNOG00000006261	Papolg	99	95.622	ENSCGRG00001014951	Papolg	100	95.622	Cricetulus_griseus_chok1gshd
ENSRNOG00000006261	Papolg	99	95.622	ENSCGRG00000005552	-	100	95.622	Cricetulus_griseus_crigri
ENSRNOG00000006261	Papolg	100	70.580	ENSCSEG00000000771	papolg	99	70.985	Cynoglossus_semilaevis
ENSRNOG00000006261	Papolg	100	68.668	ENSCVAG00000016602	papolg	95	79.422	Cyprinodon_variegatus
ENSRNOG00000006261	Papolg	100	73.510	ENSDARG00000012141	papolg	100	73.510	Danio_rerio
ENSRNOG00000006261	Papolg	100	92.162	ENSDNOG00000011326	PAPOLG	100	92.162	Dasypus_novemcinctus
ENSRNOG00000006261	Papolg	58	99.299	ENSDORG00000016228	Papolg	99	99.299	Dipodomys_ordii
ENSRNOG00000006261	Papolg	99	73.171	ENSETEG00000011815	PAPOLG	99	73.108	Echinops_telfairi
ENSRNOG00000006261	Papolg	60	71.654	ENSEBUG00000004020	papolg	90	71.279	Eptatretus_burgeri
ENSRNOG00000006261	Papolg	65	56.432	ENSEBUG00000005042	-	81	57.294	Eptatretus_burgeri
ENSRNOG00000006261	Papolg	100	93.927	ENSEASG00005002038	PAPOLG	100	94.062	Equus_asinus_asinus
ENSRNOG00000006261	Papolg	100	93.927	ENSECAG00000009859	PAPOLG	98	93.631	Equus_caballus
ENSRNOG00000006261	Papolg	100	82.297	ENSEEUG00000006196	PAPOLG	100	82.297	Erinaceus_europaeus
ENSRNOG00000006261	Papolg	100	72.585	ENSELUG00000014497	papolg	99	65.066	Esox_lucius
ENSRNOG00000006261	Papolg	100	94.197	ENSFCAG00000026126	PAPOLG	100	94.197	Felis_catus
ENSRNOG00000006261	Papolg	99	65.293	ENSFALG00000011079	PAPOLG	97	65.293	Ficedula_albicollis
ENSRNOG00000006261	Papolg	100	94.062	ENSFDAG00000010662	PAPOLG	97	94.062	Fukomys_damarensis
ENSRNOG00000006261	Papolg	66	63.006	ENSFHEG00000019080	papolg	90	64.062	Fundulus_heteroclitus
ENSRNOG00000006261	Papolg	87	83.032	ENSGMOG00000018772	papolg	93	83.032	Gadus_morhua
ENSRNOG00000006261	Papolg	100	70.027	ENSGALG00000007853	PAPOLG	100	70.027	Gallus_gallus
ENSRNOG00000006261	Papolg	100	69.271	ENSGAFG00000003263	papolg	89	70.118	Gambusia_affinis
ENSRNOG00000006261	Papolg	100	72.244	ENSGACG00000002718	papolg	100	72.848	Gasterosteus_aculeatus
ENSRNOG00000006261	Papolg	100	93.657	ENSGGOG00000006083	PAPOLG	100	93.657	Gorilla_gorilla
ENSRNOG00000006261	Papolg	100	70.169	ENSHBUG00000004882	papolg	89	70.817	Haplochromis_burtoni
ENSRNOG00000006261	Papolg	99	94.444	ENSHGLG00000019610	PAPOLG	100	94.444	Heterocephalus_glaber_female
ENSRNOG00000006261	Papolg	100	94.872	ENSHGLG00100010429	PAPOLG	99	94.872	Heterocephalus_glaber_male
ENSRNOG00000006261	Papolg	100	70.839	ENSHCOG00000006782	papolg	89	71.372	Hippocampus_comes
ENSRNOG00000006261	Papolg	100	72.296	ENSIPUG00000021642	papolg	100	72.460	Ictalurus_punctatus
ENSRNOG00000006261	Papolg	100	94.602	ENSSTOG00000010861	PAPOLG	100	94.602	Ictidomys_tridecemlineatus
ENSRNOG00000006261	Papolg	58	99.533	ENSJJAG00000015601	Papolg	99	99.533	Jaculus_jaculus
ENSRNOG00000006261	Papolg	100	71.011	ENSKMAG00000016439	papolg	97	69.664	Kryptolebias_marmoratus
ENSRNOG00000006261	Papolg	100	67.985	ENSLBEG00000023218	papolg	89	68.798	Labrus_bergylta
ENSRNOG00000006261	Papolg	99	69.640	ENSLACG00000009543	PAPOLG	100	69.640	Latimeria_chalumnae
ENSRNOG00000006261	Papolg	100	73.394	ENSLOCG00000016130	papolg	100	73.394	Lepisosteus_oculatus
ENSRNOG00000006261	Papolg	100	92.992	ENSLAFG00000010404	PAPOLG	99	97.897	Loxodonta_africana
ENSRNOG00000006261	Papolg	100	93.657	ENSMFAG00000042450	PAPOLG	100	93.792	Macaca_fascicularis
ENSRNOG00000006261	Papolg	100	93.657	ENSMMUG00000000498	PAPOLG	100	93.792	Macaca_mulatta
ENSRNOG00000006261	Papolg	100	84.718	ENSMNEG00000035939	PAPOLG	100	84.853	Macaca_nemestrina
ENSRNOG00000006261	Papolg	100	93.252	ENSMLEG00000039462	PAPOLG	100	93.387	Mandrillus_leucophaeus
ENSRNOG00000006261	Papolg	100	72.908	ENSMAMG00000010667	papolg	99	70.541	Mastacembelus_armatus
ENSRNOG00000006261	Papolg	100	70.169	ENSMZEG00005018140	papolg	99	71.448	Maylandia_zebra
ENSRNOG00000006261	Papolg	100	70.360	ENSMGAG00000001741	PAPOLG	100	70.360	Meleagris_gallopavo
ENSRNOG00000006261	Papolg	99	96.033	ENSMAUG00000009088	Papolg	99	96.033	Mesocricetus_auratus
ENSRNOG00000006261	Papolg	100	93.927	ENSMICG00000010042	PAPOLG	100	93.927	Microcebus_murinus
ENSRNOG00000006261	Papolg	100	96.211	ENSMOCG00000006857	Papolg	100	96.211	Microtus_ochrogaster
ENSRNOG00000006261	Papolg	100	72.112	ENSMMOG00000008020	papolg	99	72.377	Mola_mola
ENSRNOG00000006261	Papolg	99	85.944	ENSMODG00000002160	PAPOLG	99	85.944	Monodelphis_domestica
ENSRNOG00000006261	Papolg	100	71.846	ENSMALG00000007012	papolg	89	71.979	Monopterus_albus
ENSRNOG00000006261	Papolg	100	97.429	MGP_CAROLIEiJ_G0016144	Papolg	100	99.767	Mus_caroli
ENSRNOG00000006261	Papolg	100	97.429	ENSMUSG00000020273	Papolg	100	99.767	Mus_musculus
ENSRNOG00000006261	Papolg	100	97.158	MGP_PahariEiJ_G0016746	Papolg	100	97.158	Mus_pahari
ENSRNOG00000006261	Papolg	100	97.294	MGP_SPRETEiJ_G0016987	Papolg	100	99.767	Mus_spretus
ENSRNOG00000006261	Papolg	100	94.062	ENSMPUG00000005165	PAPOLG	90	94.197	Mustela_putorius_furo
ENSRNOG00000006261	Papolg	99	91.995	ENSMLUG00000009853	PAPOLG	100	91.995	Myotis_lucifugus
ENSRNOG00000006261	Papolg	100	94.993	ENSNGAG00000001120	Papolg	100	94.993	Nannospalax_galili
ENSRNOG00000006261	Papolg	99	63.395	ENSNBRG00000011943	papolg	99	64.153	Neolamprologus_brichardi
ENSRNOG00000006261	Papolg	58	98.832	ENSNLEG00000009507	-	99	98.832	Nomascus_leucogenys
ENSRNOG00000006261	Papolg	81	77.397	ENSMEUG00000013605	-	88	77.397	Notamacropus_eugenii
ENSRNOG00000006261	Papolg	100	93.792	ENSOPRG00000009630	PAPOLG	100	93.792	Ochotona_princeps
ENSRNOG00000006261	Papolg	58	94.824	ENSODEG00000012424	PAPOLG	99	94.824	Octodon_degus
ENSRNOG00000006261	Papolg	100	65.462	ENSONIG00000002985	papolg	100	65.863	Oreochromis_niloticus
ENSRNOG00000006261	Papolg	99	84.450	ENSOANG00000012403	PAPOLG	99	84.450	Ornithorhynchus_anatinus
ENSRNOG00000006261	Papolg	100	94.602	ENSOCUG00000004962	PAPOLG	100	94.602	Oryctolagus_cuniculus
ENSRNOG00000006261	Papolg	100	70.013	ENSORLG00000001577	papolg	89	70.542	Oryzias_latipes
ENSRNOG00000006261	Papolg	100	70.518	ENSORLG00020002482	papolg	89	70.861	Oryzias_latipes_hni
ENSRNOG00000006261	Papolg	100	70.013	ENSORLG00015008836	papolg	89	70.542	Oryzias_latipes_hsok
ENSRNOG00000006261	Papolg	100	70.053	ENSOMEG00000001406	papolg	89	69.841	Oryzias_melastigma
ENSRNOG00000006261	Papolg	58	86.744	ENSOGAG00000003145	PAPOLG	100	86.744	Otolemur_garnettii
ENSRNOG00000006261	Papolg	100	94.332	ENSOARG00000001563	PAPOLG	91	94.332	Ovis_aries
ENSRNOG00000006261	Papolg	100	93.117	ENSPPAG00000019917	PAPOLG	100	93.117	Pan_paniscus
ENSRNOG00000006261	Papolg	100	94.197	ENSPPRG00000023250	PAPOLG	100	94.197	Panthera_pardus
ENSRNOG00000006261	Papolg	100	94.062	ENSPTIG00000018126	PAPOLG	100	94.062	Panthera_tigris_altaica
ENSRNOG00000006261	Papolg	100	93.117	ENSPTRG00000011948	PAPOLG	100	93.117	Pan_troglodytes
ENSRNOG00000006261	Papolg	100	89.233	ENSPANG00000014543	PAPOLG	100	89.367	Papio_anubis
ENSRNOG00000006261	Papolg	90	72.929	ENSPKIG00000006027	PAPOLG	94	72.929	Paramormyrops_kingsleyae
ENSRNOG00000006261	Papolg	100	72.667	ENSPKIG00000003313	papolg	100	72.667	Paramormyrops_kingsleyae
ENSRNOG00000006261	Papolg	99	77.346	ENSPSIG00000013663	PAPOLG	99	77.346	Pelodiscus_sinensis
ENSRNOG00000006261	Papolg	99	95.759	ENSPEMG00000008960	-	100	95.759	Peromyscus_maniculatus_bairdii
ENSRNOG00000006261	Papolg	66	63.804	ENSPMAG00000004864	-	96	63.804	Petromyzon_marinus
ENSRNOG00000006261	Papolg	99	52.957	ENSPMAG00000002961	papolg	99	52.957	Petromyzon_marinus
ENSRNOG00000006261	Papolg	100	86.800	ENSPCIG00000028094	PAPOLG	100	86.800	Phascolarctos_cinereus
ENSRNOG00000006261	Papolg	100	69.645	ENSPFOG00000012909	papolg	99	70.263	Poecilia_formosa
ENSRNOG00000006261	Papolg	100	69.737	ENSPLAG00000018445	papolg	89	70.210	Poecilia_latipinna
ENSRNOG00000006261	Papolg	100	69.423	ENSPMEG00000003961	papolg	89	70.026	Poecilia_mexicana
ENSRNOG00000006261	Papolg	78	81.010	ENSPREG00000010358	papolg	89	69.372	Poecilia_reticulata
ENSRNOG00000006261	Papolg	100	93.252	ENSPPYG00000012392	PAPOLG	100	93.252	Pongo_abelii
ENSRNOG00000006261	Papolg	99	80.952	ENSPCAG00000012297	PAPOLG	100	80.952	Procavia_capensis
ENSRNOG00000006261	Papolg	100	82.996	ENSPCOG00000027306	PAPOLG	100	82.996	Propithecus_coquereli
ENSRNOG00000006261	Papolg	88	93.716	ENSPVAG00000013541	PAPOLG	88	93.716	Pteropus_vampyrus
ENSRNOG00000006261	Papolg	100	71.216	ENSPNYG00000006729	papolg	99	71.216	Pundamilia_nyererei
ENSRNOG00000006261	Papolg	100	72.884	ENSPNAG00000015521	papolg	100	72.884	Pygocentrus_nattereri
ENSRNOG00000006261	Papolg	100	87.854	ENSRBIG00000040086	PAPOLG	100	87.854	Rhinopithecus_bieti
ENSRNOG00000006261	Papolg	100	93.792	ENSRROG00000035954	PAPOLG	100	93.792	Rhinopithecus_roxellana
ENSRNOG00000006261	Papolg	100	93.252	ENSSBOG00000026194	PAPOLG	100	93.387	Saimiri_boliviensis_boliviensis
ENSRNOG00000006261	Papolg	94	86.544	ENSSHAG00000014942	PAPOLG	99	86.544	Sarcophilus_harrisii
ENSRNOG00000006261	Papolg	100	69.721	ENSSFOG00015002383	papolg	100	69.721	Scleropages_formosus
ENSRNOG00000006261	Papolg	100	63.747	ENSSFOG00015011874	papolg	100	63.747	Scleropages_formosus
ENSRNOG00000006261	Papolg	78	81.282	ENSSMAG00000015598	papolg	95	68.625	Scophthalmus_maximus
ENSRNOG00000006261	Papolg	100	72.752	ENSSDUG00000000912	papolg	99	71.351	Seriola_dumerili
ENSRNOG00000006261	Papolg	100	72.969	ENSSLDG00000001217	papolg	99	68.414	Seriola_lalandi_dorsalis
ENSRNOG00000006261	Papolg	100	77.333	ENSSPUG00000007491	PAPOLG	100	77.333	Sphenodon_punctatus
ENSRNOG00000006261	Papolg	100	70.169	ENSSPAG00000009004	papolg	99	70.000	Stegastes_partitus
ENSRNOG00000006261	Papolg	100	94.197	ENSSSCG00000008389	PAPOLG	100	94.197	Sus_scrofa
ENSRNOG00000006261	Papolg	73	76.525	ENSTGUG00000006762	PAPOLG	99	76.525	Taeniopygia_guttata
ENSRNOG00000006261	Papolg	100	70.509	ENSTRUG00000006410	papolg	99	70.509	Takifugu_rubripes
ENSRNOG00000006261	Papolg	100	66.008	ENSTNIG00000017106	papolg	100	66.008	Tetraodon_nigroviridis
ENSRNOG00000006261	Papolg	99	85.578	ENSTBEG00000002609	PAPOLG	100	85.578	Tupaia_belangeri
ENSRNOG00000006261	Papolg	100	88.934	ENSTTRG00000006237	PAPOLG	100	89.069	Tursiops_truncatus
ENSRNOG00000006261	Papolg	99	94.134	ENSUAMG00000011088	PAPOLG	100	94.270	Ursus_americanus
ENSRNOG00000006261	Papolg	99	94.134	ENSUMAG00000019081	PAPOLG	90	94.270	Ursus_maritimus
ENSRNOG00000006261	Papolg	99	90.068	ENSVPAG00000000492	PAPOLG	100	90.204	Vicugna_pacos
ENSRNOG00000006261	Papolg	100	93.657	ENSVVUG00000010344	PAPOLG	99	93.792	Vulpes_vulpes
ENSRNOG00000006261	Papolg	100	74.005	ENSXETG00000002208	papolg	100	74.005	Xenopus_tropicalis
ENSRNOG00000006261	Papolg	67	85.371	ENSXCOG00000006611	papolg	73	85.371	Xiphophorus_couchianus
ENSRNOG00000006261	Papolg	74	82.800	ENSXMAG00000007383	papolg	95	82.800	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004652	polynucleotide adenylyltransferase activity	21873635.	IBA	Function
GO:0004652	polynucleotide adenylyltransferase activity	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006378	mRNA polyadenylation	21873635.	IBA	Process
GO:0008150	biological_process	-	ND	Process
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0043631	RNA polyadenylation	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	ISO	Function