EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000006314 (Gene tree)
Gene ID: 171091
Gene Symbol: Zbp1
Alias: Dlm1
Full Name: Z-DNA binding protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 10476 bases
Position: chr3:171276062-171286537
Accession: 619956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000008365	z-alpha	PF02295.17	4.3e-15	1	2
ENSRNOP00000008365	z-alpha	PF02295.17	4.3e-15	2	2
ENSRNOP00000071089	z-alpha	PF02295.17	4.3e-15	1	2
ENSRNOP00000071089	z-alpha	PF02295.17	4.3e-15	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000008365	-	1692	XM_006235674	ENSRNOP00000008365	409 (aa)	XP_006235736	G3V6S4
ENSRNOT00000081036	-	2589	-	ENSRNOP00000071089	409 (aa)	-	G3V6S4

Gene Model

Click here to download ENSRNOG00000006314's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04217	Necroptosis	KEGG
rno04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000006314's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000006314	Zbp1	98	46.370	ENSG00000124256	ZBP1	97	46.604	Homo_sapiens
ENSRNOG00000006314	Zbp1	88	43.782	ENSAMEG00000012704	-	97	42.520	Ailuropoda_melanoleuca
ENSRNOG00000006314	Zbp1	94	46.731	ENSANAG00000038003	ZBP1	95	46.731	Aotus_nancymaae
ENSRNOG00000006314	Zbp1	94	47.805	ENSCJAG00000019094	ZBP1	94	47.805	Callithrix_jacchus
ENSRNOG00000006314	Zbp1	97	40.183	ENSCAFG00000023783	ZBP1	97	38.902	Canis_familiaris
ENSRNOG00000006314	Zbp1	96	43.365	ENSCAFG00020022005	ZBP1	92	42.959	Canis_lupus_dingo
ENSRNOG00000006314	Zbp1	93	46.154	ENSCHIG00000006747	-	92	45.771	Capra_hircus
ENSRNOG00000006314	Zbp1	94	44.125	ENSCPOG00000008569	ZBP1	97	44.231	Cavia_porcellus
ENSRNOG00000006314	Zbp1	94	44.878	ENSCCAG00000009469	ZBP1	94	45.742	Cebus_capucinus
ENSRNOG00000006314	Zbp1	98	47.664	ENSCATG00000013143	ZBP1	99	47.664	Cercocebus_atys
ENSRNOG00000006314	Zbp1	93	43.405	ENSCLAG00000012154	ZBP1	98	43.405	Chinchilla_lanigera
ENSRNOG00000006314	Zbp1	98	47.196	ENSCANG00000035951	ZBP1	98	46.154	Colobus_angolensis_palliatus
ENSRNOG00000006314	Zbp1	98	66.667	ENSCGRG00001015544	Zbp1	98	65.664	Cricetulus_griseus_chok1gshd
ENSRNOG00000006314	Zbp1	98	66.250	ENSCGRG00000002294	Zbp1	97	65.000	Cricetulus_griseus_crigri
ENSRNOG00000006314	Zbp1	94	47.229	ENSDNOG00000002438	-	90	47.229	Dasypus_novemcinctus
ENSRNOG00000006314	Zbp1	93	45.742	ENSEASG00005023257	ZBP1	99	43.823	Equus_asinus_asinus
ENSRNOG00000006314	Zbp1	93	45.499	ENSECAG00000017185	ZBP1	99	44.289	Equus_caballus
ENSRNOG00000006314	Zbp1	80	48.338	ENSEEUG00000002058	-	98	47.432	Erinaceus_europaeus
ENSRNOG00000006314	Zbp1	50	54.795	ENSFCAG00000000420	-	95	54.128	Felis_catus
ENSRNOG00000006314	Zbp1	98	46.604	ENSGGOG00000011001	ZBP1	97	46.838	Gorilla_gorilla
ENSRNOG00000006314	Zbp1	98	47.430	ENSMFAG00000030920	ZBP1	99	47.430	Macaca_fascicularis
ENSRNOG00000006314	Zbp1	98	47.430	ENSMMUG00000022588	ZBP1	99	47.430	Macaca_mulatta
ENSRNOG00000006314	Zbp1	98	47.430	ENSMNEG00000043957	ZBP1	99	47.430	Macaca_nemestrina
ENSRNOG00000006314	Zbp1	98	49.024	ENSMLEG00000031509	ZBP1	98	48.293	Mandrillus_leucophaeus
ENSRNOG00000006314	Zbp1	100	55.156	ENSMAUG00000001095	Zbp1	100	53.957	Mesocricetus_auratus
ENSRNOG00000006314	Zbp1	98	38.375	ENSMICG00000046613	ZBP1	98	39.310	Microcebus_murinus
ENSRNOG00000006314	Zbp1	99	62.802	ENSMOCG00000019061	Zbp1	99	60.386	Microtus_ochrogaster
ENSRNOG00000006314	Zbp1	100	73.236	MGP_CAROLIEiJ_G0024748	Zbp1	100	70.560	Mus_caroli
ENSRNOG00000006314	Zbp1	99	73.039	ENSMUSG00000027514	Zbp1	98	70.343	Mus_musculus
ENSRNOG00000006314	Zbp1	70	72.474	MGP_PahariEiJ_G0026189	-	81	75.325	Mus_pahari
ENSRNOG00000006314	Zbp1	99	73.039	MGP_SPRETEiJ_G0025668	Zbp1	100	68.698	Mus_spretus
ENSRNOG00000006314	Zbp1	96	43.810	ENSMPUG00000006670	-	92	42.721	Mustela_putorius_furo
ENSRNOG00000006314	Zbp1	93	36.105	ENSMLUG00000017020	-	95	35.835	Myotis_lucifugus
ENSRNOG00000006314	Zbp1	97	61.179	ENSNGAG00000023407	Zbp1	97	60.099	Nannospalax_galili
ENSRNOG00000006314	Zbp1	98	47.073	ENSNLEG00000007069	ZBP1	97	46.838	Nomascus_leucogenys
ENSRNOG00000006314	Zbp1	94	44.310	ENSOGAG00000014671	ZBP1	99	44.310	Otolemur_garnettii
ENSRNOG00000006314	Zbp1	87	48.787	ENSOARG00000017418	-	81	48.378	Ovis_aries
ENSRNOG00000006314	Zbp1	99	46.189	ENSPPAG00000037949	ZBP1	99	46.420	Pan_paniscus
ENSRNOG00000006314	Zbp1	53	51.502	ENSPPRG00000011275	-	98	50.431	Panthera_pardus
ENSRNOG00000006314	Zbp1	53	51.046	ENSPTIG00000011495	-	98	50.000	Panthera_tigris_altaica
ENSRNOG00000006314	Zbp1	99	45.958	ENSPTRG00000013665	ZBP1	99	46.651	Pan_troglodytes
ENSRNOG00000006314	Zbp1	98	47.897	ENSPANG00000023211	ZBP1	99	47.897	Papio_anubis
ENSRNOG00000006314	Zbp1	99	63.480	ENSPEMG00000016060	Zbp1	99	62.836	Peromyscus_maniculatus_bairdii
ENSRNOG00000006314	Zbp1	98	46.136	ENSPPYG00000011165	ZBP1	97	46.370	Pongo_abelii
ENSRNOG00000006314	Zbp1	96	43.750	ENSPCOG00000027415	ZBP1	97	43.133	Propithecus_coquereli
ENSRNOG00000006314	Zbp1	86	49.340	ENSPVAG00000014691	-	100	48.677	Pteropus_vampyrus
ENSRNOG00000006314	Zbp1	98	45.433	ENSRBIG00000044740	ZBP1	97	44.988	Rhinopithecus_bieti
ENSRNOG00000006314	Zbp1	98	45.667	ENSRROG00000038526	ZBP1	97	45.221	Rhinopithecus_roxellana
ENSRNOG00000006314	Zbp1	99	45.833	ENSSBOG00000032730	ZBP1	95	50.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000006314	Zbp1	81	51.862	ENSTBEG00000006578	ZBP1	96	51.268	Tupaia_belangeri
ENSRNOG00000006314	Zbp1	81	47.674	ENSTTRG00000000687	-	95	47.674	Tursiops_truncatus
ENSRNOG00000006314	Zbp1	82	50.147	ENSUAMG00000019777	ZBP1	75	48.387	Ursus_americanus
ENSRNOG00000006314	Zbp1	95	42.993	ENSUMAG00000002600	ZBP1	92	41.827	Ursus_maritimus
ENSRNOG00000006314	Zbp1	97	43.649	ENSVVUG00000017189	-	94	42.890	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003677	DNA binding	-	ISO	Function
GO:0003692	left-handed Z-DNA binding	-	ISO	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003726	double-stranded RNA adenosine deaminase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0060340	positive regulation of type I interferon-mediated signaling pathway	21873635.	IBA	Process
GO:0060340	positive regulation of type I interferon-mediated signaling pathway	-	ISO	Process