EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000006432 (Gene tree)
Gene ID: 312616
Gene Symbol: Trnt1
Alias: LOC312616|MGC124985
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 13577 bases
Position: chr4:138855641-138869217
Accession: 1308857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000008527	PolyA_pol	PF01743.20	1.4e-33	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000008526	-	2224	XM_008763191	ENSRNOP00000008527	434 (aa)	XP_008761413	Q4VBH2

Gene Model

Click here to download ENSRNOG00000006432's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000006432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000006432	Trnt1	100	92.166	ENSG00000072756	TRNT1	100	92.166	Homo_sapiens
ENSRNOG00000006432	Trnt1	96	67.703	ENSAPOG00000013687	trnt1	96	67.703	Acanthochromis_polyacanthus
ENSRNOG00000006432	Trnt1	100	89.908	ENSAMEG00000014520	TRNT1	100	89.908	Ailuropoda_melanoleuca
ENSRNOG00000006432	Trnt1	98	68.000	ENSACIG00000021706	trnt1	99	68.000	Amphilophus_citrinellus
ENSRNOG00000006432	Trnt1	98	67.294	ENSAOCG00000024612	trnt1	99	67.294	Amphiprion_ocellaris
ENSRNOG00000006432	Trnt1	94	60.732	ENSAPEG00000022627	trnt1	95	60.732	Amphiprion_percula
ENSRNOG00000006432	Trnt1	93	70.471	ENSATEG00000008928	trnt1	99	70.471	Anabas_testudineus
ENSRNOG00000006432	Trnt1	89	75.969	ENSAPLG00000004258	TRNT1	96	75.969	Anas_platyrhynchos
ENSRNOG00000006432	Trnt1	99	74.885	ENSACAG00000005657	TRNT1	99	74.885	Anolis_carolinensis
ENSRNOG00000006432	Trnt1	100	91.935	ENSANAG00000024802	TRNT1	100	91.935	Aotus_nancymaae
ENSRNOG00000006432	Trnt1	98	67.059	ENSACLG00000022227	trnt1	99	67.059	Astatotilapia_calliptera
ENSRNOG00000006432	Trnt1	97	69.121	ENSAMXG00000003960	trnt1	97	68.957	Astyanax_mexicanus
ENSRNOG00000006432	Trnt1	100	91.014	ENSBTAG00000019534	TRNT1	100	91.014	Bos_taurus
ENSRNOG00000006432	Trnt1	94	43.705	WBGene00010089	hpo-31	94	43.705	Caenorhabditis_elegans
ENSRNOG00000006432	Trnt1	100	92.396	ENSCJAG00000015466	TRNT1	100	92.396	Callithrix_jacchus
ENSRNOG00000006432	Trnt1	100	89.401	ENSCAFG00000005985	TRNT1	99	89.401	Canis_familiaris
ENSRNOG00000006432	Trnt1	100	89.401	ENSCAFG00020014746	TRNT1	99	89.401	Canis_lupus_dingo
ENSRNOG00000006432	Trnt1	100	91.014	ENSCHIG00000007030	TRNT1	99	91.014	Capra_hircus
ENSRNOG00000006432	Trnt1	100	93.088	ENSTSYG00000013390	TRNT1	100	93.088	Carlito_syrichta
ENSRNOG00000006432	Trnt1	87	74.868	ENSCAPG00000006891	TRNT1	100	74.868	Cavia_aperea
ENSRNOG00000006432	Trnt1	99	91.608	ENSCPOG00000007849	TRNT1	99	91.608	Cavia_porcellus
ENSRNOG00000006432	Trnt1	95	88.942	ENSCCAG00000002919	TRNT1	100	91.022	Cebus_capucinus
ENSRNOG00000006432	Trnt1	99	92.841	ENSCATG00000031985	TRNT1	99	92.841	Cercocebus_atys
ENSRNOG00000006432	Trnt1	99	92.774	ENSCLAG00000005186	TRNT1	99	92.774	Chinchilla_lanigera
ENSRNOG00000006432	Trnt1	100	93.318	ENSCSAG00000011052	TRNT1	100	93.318	Chlorocebus_sabaeus
ENSRNOG00000006432	Trnt1	84	90.964	ENSCHOG00000005712	TRNT1	84	90.964	Choloepus_hoffmanni
ENSRNOG00000006432	Trnt1	94	81.463	ENSCPBG00000017636	TRNT1	94	81.463	Chrysemys_picta_bellii
ENSRNOG00000006432	Trnt1	93	44.282	ENSCING00000007069	-	99	44.282	Ciona_intestinalis
ENSRNOG00000006432	Trnt1	97	44.104	ENSCSAVG00000007494	-	99	44.104	Ciona_savignyi
ENSRNOG00000006432	Trnt1	100	92.857	ENSCANG00000039030	TRNT1	100	92.857	Colobus_angolensis_palliatus
ENSRNOG00000006432	Trnt1	100	96.083	ENSCGRG00001009998	Trnt1	100	96.083	Cricetulus_griseus_chok1gshd
ENSRNOG00000006432	Trnt1	100	96.083	ENSCGRG00000013410	Trnt1	100	96.083	Cricetulus_griseus_crigri
ENSRNOG00000006432	Trnt1	98	67.059	ENSCSEG00000008157	trnt1	99	67.059	Cynoglossus_semilaevis
ENSRNOG00000006432	Trnt1	94	70.343	ENSCVAG00000019770	trnt1	96	70.343	Cyprinodon_variegatus
ENSRNOG00000006432	Trnt1	99	67.749	ENSDARG00000075297	trnt1	99	67.749	Danio_rerio
ENSRNOG00000006432	Trnt1	100	90.553	ENSDNOG00000008837	TRNT1	100	90.553	Dasypus_novemcinctus
ENSRNOG00000006432	Trnt1	100	89.862	ENSDORG00000014035	Trnt1	100	89.862	Dipodomys_ordii
ENSRNOG00000006432	Trnt1	92	48.762	FBgn0037369	CG2100	83	48.762	Drosophila_melanogaster
ENSRNOG00000006432	Trnt1	57	87.952	ENSETEG00000018177	TRNT1	100	87.952	Echinops_telfairi
ENSRNOG00000006432	Trnt1	93	61.042	ENSEBUG00000012779	-	95	61.042	Eptatretus_burgeri
ENSRNOG00000006432	Trnt1	100	91.244	ENSEASG00005003577	TRNT1	100	91.244	Equus_asinus_asinus
ENSRNOG00000006432	Trnt1	100	91.475	ENSECAG00000014420	TRNT1	100	91.475	Equus_caballus
ENSRNOG00000006432	Trnt1	99	89.070	ENSEEUG00000009567	TRNT1	99	89.070	Erinaceus_europaeus
ENSRNOG00000006432	Trnt1	98	68.298	ENSELUG00000003802	trnt1	99	68.298	Esox_lucius
ENSRNOG00000006432	Trnt1	100	90.323	ENSFCAG00000026805	TRNT1	99	90.323	Felis_catus
ENSRNOG00000006432	Trnt1	89	75.584	ENSFALG00000013539	TRNT1	100	75.584	Ficedula_albicollis
ENSRNOG00000006432	Trnt1	99	92.541	ENSFDAG00000018412	TRNT1	99	92.541	Fukomys_damarensis
ENSRNOG00000006432	Trnt1	96	68.558	ENSFHEG00000019294	trnt1	99	68.558	Fundulus_heteroclitus
ENSRNOG00000006432	Trnt1	94	68.059	ENSGMOG00000007460	trnt1	96	68.059	Gadus_morhua
ENSRNOG00000006432	Trnt1	99	70.901	ENSGALG00000017368	TRNT1	99	70.901	Gallus_gallus
ENSRNOG00000006432	Trnt1	94	69.853	ENSGAFG00000008647	trnt1	96	69.853	Gambusia_affinis
ENSRNOG00000006432	Trnt1	94	68.137	ENSGACG00000011903	trnt1	96	68.848	Gasterosteus_aculeatus
ENSRNOG00000006432	Trnt1	96	80.769	ENSGAGG00000020942	TRNT1	95	80.769	Gopherus_agassizii
ENSRNOG00000006432	Trnt1	100	92.396	ENSGGOG00000015286	TRNT1	100	92.396	Gorilla_gorilla
ENSRNOG00000006432	Trnt1	98	67.059	ENSHBUG00000002797	trnt1	99	67.059	Haplochromis_burtoni
ENSRNOG00000006432	Trnt1	99	93.473	ENSHGLG00000003649	TRNT1	99	93.473	Heterocephalus_glaber_female
ENSRNOG00000006432	Trnt1	99	88.140	ENSHGLG00000000221	-	99	88.140	Heterocephalus_glaber_female
ENSRNOG00000006432	Trnt1	99	92.308	ENSHGLG00100016421	TRNT1	99	92.308	Heterocephalus_glaber_male
ENSRNOG00000006432	Trnt1	94	68.627	ENSHCOG00000010618	trnt1	96	68.627	Hippocampus_comes
ENSRNOG00000006432	Trnt1	99	66.282	ENSIPUG00000000971	trnt1	99	66.282	Ictalurus_punctatus
ENSRNOG00000006432	Trnt1	99	90.233	ENSSTOG00000000150	TRNT1	96	93.970	Ictidomys_tridecemlineatus
ENSRNOG00000006432	Trnt1	99	93.023	ENSJJAG00000018561	Trnt1	99	93.023	Jaculus_jaculus
ENSRNOG00000006432	Trnt1	96	67.925	ENSKMAG00000011307	trnt1	99	67.925	Kryptolebias_marmoratus
ENSRNOG00000006432	Trnt1	94	63.171	ENSLBEG00000019457	trnt1	97	63.171	Labrus_bergylta
ENSRNOG00000006432	Trnt1	96	73.494	ENSLACG00000013227	TRNT1	96	73.494	Latimeria_chalumnae
ENSRNOG00000006432	Trnt1	97	71.259	ENSLOCG00000011105	trnt1	95	71.259	Lepisosteus_oculatus
ENSRNOG00000006432	Trnt1	100	92.396	ENSLAFG00000023191	TRNT1	100	92.396	Loxodonta_africana
ENSRNOG00000006432	Trnt1	99	93.072	ENSMFAG00000045113	TRNT1	99	93.072	Macaca_fascicularis
ENSRNOG00000006432	Trnt1	99	93.072	ENSMMUG00000017983	TRNT1	99	93.072	Macaca_mulatta
ENSRNOG00000006432	Trnt1	99	93.072	ENSMNEG00000037805	TRNT1	99	93.072	Macaca_nemestrina
ENSRNOG00000006432	Trnt1	88	94.503	ENSMLEG00000033671	TRNT1	99	94.503	Mandrillus_leucophaeus
ENSRNOG00000006432	Trnt1	98	68.235	ENSMAMG00000023401	trnt1	99	68.235	Mastacembelus_armatus
ENSRNOG00000006432	Trnt1	98	67.059	ENSMZEG00005009141	trnt1	99	67.059	Maylandia_zebra
ENSRNOG00000006432	Trnt1	74	75.389	ENSMGAG00000009971	TRNT1	100	75.389	Meleagris_gallopavo
ENSRNOG00000006432	Trnt1	100	95.853	ENSMAUG00000020707	Trnt1	100	95.853	Mesocricetus_auratus
ENSRNOG00000006432	Trnt1	99	93.256	ENSMICG00000016615	TRNT1	99	93.256	Microcebus_murinus
ENSRNOG00000006432	Trnt1	100	95.161	ENSMOCG00000004539	Trnt1	100	95.161	Microtus_ochrogaster
ENSRNOG00000006432	Trnt1	99	66.744	ENSMMOG00000010742	trnt1	99	66.744	Mola_mola
ENSRNOG00000006432	Trnt1	99	83.953	ENSMODG00000004368	TRNT1	99	83.953	Monodelphis_domestica
ENSRNOG00000006432	Trnt1	98	66.353	ENSMALG00000008376	trnt1	99	66.353	Monopterus_albus
ENSRNOG00000006432	Trnt1	100	97.235	MGP_CAROLIEiJ_G0028698	Trnt1	100	97.235	Mus_caroli
ENSRNOG00000006432	Trnt1	100	97.235	ENSMUSG00000013736	Trnt1	100	97.235	Mus_musculus
ENSRNOG00000006432	Trnt1	100	96.544	MGP_PahariEiJ_G0022449	Trnt1	100	96.552	Mus_pahari
ENSRNOG00000006432	Trnt1	100	97.696	MGP_SPRETEiJ_G0029726	Trnt1	100	97.696	Mus_spretus
ENSRNOG00000006432	Trnt1	100	91.244	ENSMPUG00000017017	TRNT1	99	91.244	Mustela_putorius_furo
ENSRNOG00000006432	Trnt1	89	87.565	ENSMLUG00000011864	TRNT1	100	87.565	Myotis_lucifugus
ENSRNOG00000006432	Trnt1	99	94.186	ENSNGAG00000000537	Trnt1	99	94.186	Nannospalax_galili
ENSRNOG00000006432	Trnt1	79	66.667	ENSNBRG00000023606	trnt1	99	66.667	Neolamprologus_brichardi
ENSRNOG00000006432	Trnt1	100	92.857	ENSNLEG00000003226	TRNT1	100	92.857	Nomascus_leucogenys
ENSRNOG00000006432	Trnt1	99	83.721	ENSMEUG00000004684	TRNT1	99	83.721	Notamacropus_eugenii
ENSRNOG00000006432	Trnt1	88	80.157	ENSOPRG00000015067	TRNT1	99	80.157	Ochotona_princeps
ENSRNOG00000006432	Trnt1	99	91.455	ENSODEG00000007597	TRNT1	99	91.455	Octodon_degus
ENSRNOG00000006432	Trnt1	98	67.294	ENSONIG00000020273	trnt1	98	67.294	Oreochromis_niloticus
ENSRNOG00000006432	Trnt1	99	74.533	ENSOANG00000007514	TRNT1	99	74.533	Ornithorhynchus_anatinus
ENSRNOG00000006432	Trnt1	100	85.714	ENSOCUG00000008580	TRNT1	99	85.714	Oryctolagus_cuniculus
ENSRNOG00000006432	Trnt1	97	66.190	ENSORLG00000003165	trnt1	99	66.190	Oryzias_latipes
ENSRNOG00000006432	Trnt1	97	66.667	ENSORLG00020022060	trnt1	99	66.667	Oryzias_latipes_hni
ENSRNOG00000006432	Trnt1	96	65.094	ENSORLG00015018915	trnt1	99	65.094	Oryzias_latipes_hsok
ENSRNOG00000006432	Trnt1	95	65.049	ENSOMEG00000003331	trnt1	97	65.049	Oryzias_melastigma
ENSRNOG00000006432	Trnt1	100	90.783	ENSOARG00000008631	TRNT1	99	90.783	Ovis_aries
ENSRNOG00000006432	Trnt1	100	92.396	ENSPPAG00000043566	TRNT1	100	92.396	Pan_paniscus
ENSRNOG00000006432	Trnt1	99	90.531	ENSPPRG00000001327	TRNT1	99	90.531	Panthera_pardus
ENSRNOG00000006432	Trnt1	100	90.323	ENSPTIG00000011448	TRNT1	99	90.323	Panthera_tigris_altaica
ENSRNOG00000006432	Trnt1	100	92.396	ENSPTRG00000014564	TRNT1	100	92.396	Pan_troglodytes
ENSRNOG00000006432	Trnt1	99	92.841	ENSPANG00000025944	TRNT1	99	92.841	Papio_anubis
ENSRNOG00000006432	Trnt1	94	70.976	ENSPKIG00000020015	trnt1	95	70.976	Paramormyrops_kingsleyae
ENSRNOG00000006432	Trnt1	91	80.605	ENSPSIG00000017356	TRNT1	99	82.222	Pelodiscus_sinensis
ENSRNOG00000006432	Trnt1	98	67.059	ENSPMGG00000008888	trnt1	98	67.059	Periophthalmus_magnuspinnatus
ENSRNOG00000006432	Trnt1	100	97.005	ENSPEMG00000019845	Trnt1	100	97.005	Peromyscus_maniculatus_bairdii
ENSRNOG00000006432	Trnt1	99	84.186	ENSPCIG00000030436	TRNT1	99	84.186	Phascolarctos_cinereus
ENSRNOG00000006432	Trnt1	94	69.363	ENSPFOG00000006194	trnt1	96	69.363	Poecilia_formosa
ENSRNOG00000006432	Trnt1	94	69.363	ENSPLAG00000015623	trnt1	99	69.231	Poecilia_latipinna
ENSRNOG00000006432	Trnt1	94	69.363	ENSPMEG00000012216	trnt1	99	69.231	Poecilia_mexicana
ENSRNOG00000006432	Trnt1	94	69.268	ENSPREG00000021470	trnt1	96	69.268	Poecilia_reticulata
ENSRNOG00000006432	Trnt1	100	93.088	ENSPPYG00000013702	TRNT1	100	93.088	Pongo_abelii
ENSRNOG00000006432	Trnt1	88	90.601	ENSPCAG00000001951	TRNT1	100	90.601	Procavia_capensis
ENSRNOG00000006432	Trnt1	100	92.627	ENSPCOG00000022228	TRNT1	100	92.627	Propithecus_coquereli
ENSRNOG00000006432	Trnt1	88	90.625	ENSPVAG00000008784	TRNT1	100	90.625	Pteropus_vampyrus
ENSRNOG00000006432	Trnt1	98	67.059	ENSPNYG00000003120	trnt1	99	67.059	Pundamilia_nyererei
ENSRNOG00000006432	Trnt1	98	68.140	ENSPNAG00000000565	trnt1	99	68.140	Pygocentrus_nattereri
ENSRNOG00000006432	Trnt1	100	90.323	ENSRBIG00000042632	TRNT1	100	90.323	Rhinopithecus_bieti
ENSRNOG00000006432	Trnt1	100	92.627	ENSRROG00000036866	TRNT1	100	92.627	Rhinopithecus_roxellana
ENSRNOG00000006432	Trnt1	100	92.396	ENSSBOG00000021208	TRNT1	100	92.396	Saimiri_boliviensis_boliviensis
ENSRNOG00000006432	Trnt1	99	83.721	ENSSHAG00000018861	TRNT1	99	83.721	Sarcophilus_harrisii
ENSRNOG00000006432	Trnt1	94	71.744	ENSSFOG00015020844	trnt1	94	71.744	Scleropages_formosus
ENSRNOG00000006432	Trnt1	98	67.294	ENSSMAG00000015432	trnt1	97	67.294	Scophthalmus_maximus
ENSRNOG00000006432	Trnt1	98	66.353	ENSSDUG00000012320	trnt1	99	66.353	Seriola_dumerili
ENSRNOG00000006432	Trnt1	56	63.071	ENSSLDG00000016463	-	91	63.180	Seriola_lalandi_dorsalis
ENSRNOG00000006432	Trnt1	98	66.353	ENSSLDG00000009325	trnt1	99	66.353	Seriola_lalandi_dorsalis
ENSRNOG00000006432	Trnt1	88	80.990	ENSSPUG00000014153	TRNT1	100	80.990	Sphenodon_punctatus
ENSRNOG00000006432	Trnt1	98	66.353	ENSSPAG00000021005	trnt1	99	66.353	Stegastes_partitus
ENSRNOG00000006432	Trnt1	100	91.244	ENSSSCG00000011529	TRNT1	100	91.244	Sus_scrofa
ENSRNOG00000006432	Trnt1	93	75.556	ENSTGUG00000010192	TRNT1	99	75.556	Taeniopygia_guttata
ENSRNOG00000006432	Trnt1	98	67.059	ENSTRUG00000001088	trnt1	99	67.059	Takifugu_rubripes
ENSRNOG00000006432	Trnt1	99	66.667	ENSTNIG00000007363	trnt1	99	66.667	Tetraodon_nigroviridis
ENSRNOG00000006432	Trnt1	75	72.973	ENSTBEG00000006367	TRNT1	100	72.973	Tupaia_belangeri
ENSRNOG00000006432	Trnt1	100	90.783	ENSTTRG00000007803	TRNT1	100	90.783	Tursiops_truncatus
ENSRNOG00000006432	Trnt1	100	89.862	ENSUAMG00000022574	TRNT1	99	89.862	Ursus_americanus
ENSRNOG00000006432	Trnt1	100	90.092	ENSUMAG00000024092	TRNT1	99	90.092	Ursus_maritimus
ENSRNOG00000006432	Trnt1	100	89.631	ENSVVUG00000012810	TRNT1	99	89.631	Vulpes_vulpes
ENSRNOG00000006432	Trnt1	98	64.103	ENSXETG00000025091	trnt1	99	65.920	Xenopus_tropicalis
ENSRNOG00000006432	Trnt1	94	69.608	ENSXCOG00000010150	trnt1	96	69.608	Xiphophorus_couchianus
ENSRNOG00000006432	Trnt1	94	69.118	ENSXMAG00000002227	trnt1	96	69.118	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0000049	tRNA binding	-	ISO	Function
GO:0001680	tRNA 3'-terminal CCA addition	-	IEA	Process
GO:0001680	tRNA 3'-terminal CCA addition	-	ISO	Process
GO:0005739	mitochondrion	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0052929	ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity	-	IEA	Function
GO:0052929	ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity	-	ISO	Function
GO:1990180	mitochondrial tRNA 3'-end processing	-	IEA	Process
GO:1990180	mitochondrial tRNA 3'-end processing	-	ISO	Process