EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000006600 (Gene tree)
Gene ID: 360663
Gene Symbol: Unk
Alias: LOC360663|Zc3h5|Zc3hdc5
Full Name: unkempt family zinc finger
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 29079 bases
Position: chr10:104582955-104612033
Accession: 1309224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000009733	zf-CCCH	PF00642.24	0.00015	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000009733	-	2687	XM_003750953	ENSRNOP00000009733	810 (aa)	XP_003751001	D3ZV40

Gene Model

Click here to download ENSRNOG00000006600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000006600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000006600	Unk	77	74.841	ENSRNOG00000054605	Unkl	91	78.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000006600	Unk	98	94.817	ENSG00000132478	UNK	97	100.000	Homo_sapiens
ENSRNOG00000006600	Unk	98	94.817	ENSAMEG00000009769	UNK	89	94.817	Ailuropoda_melanoleuca
ENSRNOG00000006600	Unk	96	56.929	ENSATEG00000004212	unk	94	57.018	Anabas_testudineus
ENSRNOG00000006600	Unk	96	87.516	ENSAPLG00000014891	UNK	100	87.516	Anas_platyrhynchos
ENSRNOG00000006600	Unk	100	83.918	ENSACAG00000007303	UNK	98	84.758	Anolis_carolinensis
ENSRNOG00000006600	Unk	98	94.817	ENSANAG00000017139	UNK	98	94.817	Aotus_nancymaae
ENSRNOG00000006600	Unk	53	81.849	ENSAMXG00000031804	unk	56	61.260	Astyanax_mexicanus
ENSRNOG00000006600	Unk	98	94.564	ENSBTAG00000016287	UNK	98	94.564	Bos_taurus
ENSRNOG00000006600	Unk	98	94.690	ENSCJAG00000014056	UNK	98	94.690	Callithrix_jacchus
ENSRNOG00000006600	Unk	98	94.564	ENSCAFG00000004925	UNK	89	94.564	Canis_familiaris
ENSRNOG00000006600	Unk	98	94.564	ENSCAFG00020004454	UNK	98	94.564	Canis_lupus_dingo
ENSRNOG00000006600	Unk	98	93.932	ENSCHIG00000015385	UNK	98	93.932	Capra_hircus
ENSRNOG00000006600	Unk	98	94.817	ENSTSYG00000008096	UNK	98	94.817	Carlito_syrichta
ENSRNOG00000006600	Unk	96	84.000	ENSCAPG00000008657	UNK	96	84.000	Cavia_aperea
ENSRNOG00000006600	Unk	98	95.322	ENSCPOG00000012679	UNK	98	95.322	Cavia_porcellus
ENSRNOG00000006600	Unk	98	94.817	ENSCCAG00000031100	UNK	98	94.817	Cebus_capucinus
ENSRNOG00000006600	Unk	98	94.817	ENSCATG00000038041	UNK	98	94.817	Cercocebus_atys
ENSRNOG00000006600	Unk	98	95.702	ENSCLAG00000008106	UNK	98	95.702	Chinchilla_lanigera
ENSRNOG00000006600	Unk	98	94.690	ENSCSAG00000004859	UNK	98	94.690	Chlorocebus_sabaeus
ENSRNOG00000006600	Unk	100	84.643	ENSCPBG00000028046	UNK	99	85.498	Chrysemys_picta_bellii
ENSRNOG00000006600	Unk	98	94.943	ENSCANG00000033795	UNK	98	94.943	Colobus_angolensis_palliatus
ENSRNOG00000006600	Unk	100	97.160	ENSCGRG00001024874	Unk	100	97.160	Cricetulus_griseus_chok1gshd
ENSRNOG00000006600	Unk	100	96.790	ENSCGRG00000008631	Unk	100	96.790	Cricetulus_griseus_crigri
ENSRNOG00000006600	Unk	96	56.873	ENSCSEG00000020209	unk	95	58.207	Cynoglossus_semilaevis
ENSRNOG00000006600	Unk	96	58.493	ENSDARG00000000935	unk	94	59.515	Danio_rerio
ENSRNOG00000006600	Unk	98	93.426	ENSDNOG00000038145	UNK	86	93.426	Dasypus_novemcinctus
ENSRNOG00000006600	Unk	98	95.070	ENSDORG00000008133	Unk	98	95.070	Dipodomys_ordii
ENSRNOG00000006600	Unk	73	86.125	ENSETEG00000019640	UNK	97	86.125	Echinops_telfairi
ENSRNOG00000006600	Unk	98	95.196	ENSEASG00005002430	UNK	98	95.196	Equus_asinus_asinus
ENSRNOG00000006600	Unk	98	95.196	ENSECAG00000024672	UNK	99	95.097	Equus_caballus
ENSRNOG00000006600	Unk	85	100.000	ENSEEUG00000013779	UNK	85	100.000	Erinaceus_europaeus
ENSRNOG00000006600	Unk	96	55.610	ENSELUG00000023290	unk	95	57.266	Esox_lucius
ENSRNOG00000006600	Unk	98	94.564	ENSFCAG00000005757	UNK	98	94.564	Felis_catus
ENSRNOG00000006600	Unk	96	87.242	ENSFALG00000001035	UNK	94	87.242	Ficedula_albicollis
ENSRNOG00000006600	Unk	98	94.066	ENSFDAG00000009316	UNK	98	94.066	Fukomys_damarensis
ENSRNOG00000006600	Unk	81	75.385	ENSGMOG00000014314	unk	81	75.767	Gadus_morhua
ENSRNOG00000006600	Unk	100	84.764	ENSGALG00000002278	UNK	98	85.750	Gallus_gallus
ENSRNOG00000006600	Unk	100	84.643	ENSGAGG00000007411	UNK	98	85.626	Gopherus_agassizii
ENSRNOG00000006600	Unk	98	94.817	ENSGGOG00000009203	UNK	98	94.817	Gorilla_gorilla
ENSRNOG00000006600	Unk	98	96.081	ENSHGLG00000007512	UNK	98	96.081	Heterocephalus_glaber_female
ENSRNOG00000006600	Unk	98	96.081	ENSHGLG00100002318	UNK	98	96.081	Heterocephalus_glaber_male
ENSRNOG00000006600	Unk	96	55.669	ENSIPUG00000004291	UNK	94	57.452	Ictalurus_punctatus
ENSRNOG00000006600	Unk	91	95.142	ENSSTOG00000013344	UNK	97	94.886	Ictidomys_tridecemlineatus
ENSRNOG00000006600	Unk	98	95.702	ENSJJAG00000009816	Unk	98	95.702	Jaculus_jaculus
ENSRNOG00000006600	Unk	100	71.951	ENSLACG00000014044	UNK	97	72.990	Latimeria_chalumnae
ENSRNOG00000006600	Unk	97	66.499	ENSLOCG00000011578	unk	95	66.083	Lepisosteus_oculatus
ENSRNOG00000006600	Unk	98	93.443	ENSLAFG00000022662	UNK	98	93.443	Loxodonta_africana
ENSRNOG00000006600	Unk	98	94.817	ENSMFAG00000037148	UNK	98	94.817	Macaca_fascicularis
ENSRNOG00000006600	Unk	98	94.817	ENSMMUG00000013646	UNK	98	94.817	Macaca_mulatta
ENSRNOG00000006600	Unk	98	94.943	ENSMNEG00000036240	UNK	98	94.943	Macaca_nemestrina
ENSRNOG00000006600	Unk	98	94.437	ENSMLEG00000043327	UNK	98	94.437	Mandrillus_leucophaeus
ENSRNOG00000006600	Unk	96	56.095	ENSMAMG00000001390	unk	94	56.873	Mastacembelus_armatus
ENSRNOG00000006600	Unk	96	84.802	ENSMGAG00000004713	UNK	100	84.802	Meleagris_gallopavo
ENSRNOG00000006600	Unk	100	97.654	ENSMAUG00000011025	Unk	100	97.654	Mesocricetus_auratus
ENSRNOG00000006600	Unk	98	94.943	ENSMICG00000007591	UNK	98	94.943	Microcebus_murinus
ENSRNOG00000006600	Unk	100	97.160	ENSMOCG00000021657	Unk	100	97.160	Microtus_ochrogaster
ENSRNOG00000006600	Unk	96	55.852	ENSMMOG00000004874	unk	94	57.107	Mola_mola
ENSRNOG00000006600	Unk	97	84.968	ENSMODG00000007684	UNK	85	84.968	Monodelphis_domestica
ENSRNOG00000006600	Unk	100	98.272	MGP_CAROLIEiJ_G0017427	Unk	100	98.272	Mus_caroli
ENSRNOG00000006600	Unk	100	98.025	ENSMUSG00000020770	Unk	100	98.025	Mus_musculus
ENSRNOG00000006600	Unk	100	97.654	MGP_PahariEiJ_G0018556	Unk	100	97.654	Mus_pahari
ENSRNOG00000006600	Unk	100	98.025	MGP_SPRETEiJ_G0018272	Unk	100	98.025	Mus_spretus
ENSRNOG00000006600	Unk	98	93.577	ENSMPUG00000013806	UNK	98	93.577	Mustela_putorius_furo
ENSRNOG00000006600	Unk	98	93.679	ENSMLUG00000015453	UNK	98	93.679	Myotis_lucifugus
ENSRNOG00000006600	Unk	100	96.296	ENSNGAG00000012366	Unk	100	96.296	Nannospalax_galili
ENSRNOG00000006600	Unk	100	89.012	ENSNLEG00000001120	UNK	98	90.736	Nomascus_leucogenys
ENSRNOG00000006600	Unk	97	85.714	ENSMEUG00000004094	UNK	97	85.842	Notamacropus_eugenii
ENSRNOG00000006600	Unk	100	92.346	ENSOPRG00000012784	UNK	98	92.415	Ochotona_princeps
ENSRNOG00000006600	Unk	98	89.254	ENSODEG00000010183	UNK	98	89.001	Octodon_degus
ENSRNOG00000006600	Unk	98	93.552	ENSOCUG00000014994	UNK	98	93.552	Oryctolagus_cuniculus
ENSRNOG00000006600	Unk	96	54.892	ENSORLG00000028573	unk	94	56.726	Oryzias_latipes
ENSRNOG00000006600	Unk	96	45.489	ENSOMEG00000009977	unk	95	46.299	Oryzias_melastigma
ENSRNOG00000006600	Unk	98	94.817	ENSOGAG00000001922	UNK	90	94.817	Otolemur_garnettii
ENSRNOG00000006600	Unk	98	83.209	ENSOARG00000009548	UNK	97	83.209	Ovis_aries
ENSRNOG00000006600	Unk	98	94.817	ENSPPAG00000032800	UNK	98	94.817	Pan_paniscus
ENSRNOG00000006600	Unk	98	94.817	ENSPPRG00000008948	UNK	98	94.817	Panthera_pardus
ENSRNOG00000006600	Unk	98	94.690	ENSPTIG00000005435	UNK	98	94.690	Panthera_tigris_altaica
ENSRNOG00000006600	Unk	98	94.817	ENSPTRG00000009656	UNK	98	94.817	Pan_troglodytes
ENSRNOG00000006600	Unk	98	94.817	ENSPANG00000020121	UNK	98	94.817	Papio_anubis
ENSRNOG00000006600	Unk	96	56.156	ENSPKIG00000022222	unk	94	57.716	Paramormyrops_kingsleyae
ENSRNOG00000006600	Unk	79	79.363	ENSPSIG00000009640	UNK	100	79.363	Pelodiscus_sinensis
ENSRNOG00000006600	Unk	96	55.569	ENSPMGG00000021574	unk	93	56.375	Periophthalmus_magnuspinnatus
ENSRNOG00000006600	Unk	100	97.160	ENSPEMG00000016145	Unk	100	97.160	Peromyscus_maniculatus_bairdii
ENSRNOG00000006600	Unk	99	89.677	ENSPCIG00000020300	UNK	84	89.554	Phascolarctos_cinereus
ENSRNOG00000006600	Unk	98	94.817	ENSPPYG00000008637	UNK	98	94.817	Pongo_abelii
ENSRNOG00000006600	Unk	88	86.796	ENSPCAG00000004504	UNK	88	86.796	Procavia_capensis
ENSRNOG00000006600	Unk	98	94.943	ENSPCOG00000027411	UNK	98	94.943	Propithecus_coquereli
ENSRNOG00000006600	Unk	92	98.098	ENSPVAG00000008460	UNK	92	98.098	Pteropus_vampyrus
ENSRNOG00000006600	Unk	95	59.484	ENSPNAG00000011973	unk	93	60.052	Pygocentrus_nattereri
ENSRNOG00000006600	Unk	98	95.070	ENSRBIG00000025523	UNK	98	95.070	Rhinopithecus_bieti
ENSRNOG00000006600	Unk	98	94.943	ENSRROG00000013651	UNK	98	94.943	Rhinopithecus_roxellana
ENSRNOG00000006600	Unk	98	94.817	ENSSBOG00000019483	UNK	98	94.817	Saimiri_boliviensis_boliviensis
ENSRNOG00000006600	Unk	97	89.567	ENSSHAG00000017696	UNK	97	89.567	Sarcophilus_harrisii
ENSRNOG00000006600	Unk	96	55.781	ENSSFOG00015003052	unk	94	55.781	Scleropages_formosus
ENSRNOG00000006600	Unk	96	56.423	ENSSDUG00000012373	unk	94	57.107	Seriola_dumerili
ENSRNOG00000006600	Unk	96	55.597	ENSSLDG00000001990	unk	94	56.838	Seriola_lalandi_dorsalis
ENSRNOG00000006600	Unk	99	81.728	ENSSPUG00000008526	UNK	97	84.217	Sphenodon_punctatus
ENSRNOG00000006600	Unk	98	94.311	ENSSSCG00000017201	UNK	98	94.311	Sus_scrofa
ENSRNOG00000006600	Unk	97	86.990	ENSTGUG00000008279	UNK	98	86.852	Taeniopygia_guttata
ENSRNOG00000006600	Unk	52	94.118	ENSTBEG00000016178	-	53	94.118	Tupaia_belangeri
ENSRNOG00000006600	Unk	90	98.324	ENSTTRG00000015890	UNK	90	98.324	Tursiops_truncatus
ENSRNOG00000006600	Unk	96	90.710	ENSUAMG00000003483	UNK	97	90.710	Ursus_americanus
ENSRNOG00000006600	Unk	96	94.710	ENSUMAG00000010576	UNK	99	94.710	Ursus_maritimus
ENSRNOG00000006600	Unk	56	96.078	ENSVPAG00000011532	-	57	96.078	Vicugna_pacos
ENSRNOG00000006600	Unk	100	98.093	ENSVVUG00000014786	UNK	100	98.093	Vulpes_vulpes
ENSRNOG00000006600	Unk	97	78.382	ENSXETG00000012578	unk	96	78.854	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001764	neuron migration	21873635.	IBA	Process
GO:0001764	neuron migration	-	ISO	Process
GO:0005844	polysome	21873635.	IBA	Component
GO:0005844	polysome	-	ISO	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0048667	cell morphogenesis involved in neuron differentiation	21873635.	IBA	Process
GO:0048667	cell morphogenesis involved in neuron differentiation	-	ISO	Process
GO:1905538	polysome binding	-	IEA	Function
GO:1905538	polysome binding	-	ISO	Function
GO:1990715	mRNA CDS binding	21873635.	IBA	Function
GO:1990715	mRNA CDS binding	-	ISO	Function
GO:2000766	negative regulation of cytoplasmic translation	21873635.	IBA	Process
GO:2000766	negative regulation of cytoplasmic translation	-	ISO	Process