EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000006816 (Gene tree)
Gene ID: 117060
Gene Symbol: Ubr5
Alias: Dd5|LOC102551120|Rat100
Full Name: ubiquitin protein ligase E3 component n-recognin 5
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 64310 bases
Position: chr7:76789531-76853840
Accession: 621236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000009115	PABP	PF00658.18	1.2e-19	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000009115	-	7293	XM_006241570	ENSRNOP00000009115	2430 (aa)	XP_006241632	H9KVE3

Gene Model

Click here to download ENSRNOG00000006816's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000006816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000006816	Ubr5	100	96.506	ENSG00000104517	UBR5	100	99.398	Homo_sapiens
ENSRNOG00000006816	Ubr5	100	86.546	ENSAPOG00000007770	ubr5	86	86.587	Acanthochromis_polyacanthus
ENSRNOG00000006816	Ubr5	100	96.509	ENSAMEG00000014808	UBR5	87	96.509	Ailuropoda_melanoleuca
ENSRNOG00000006816	Ubr5	100	86.615	ENSACIG00000003786	ubr5	96	86.451	Amphilophus_citrinellus
ENSRNOG00000006816	Ubr5	100	86.371	ENSAPEG00000007895	ubr5	96	86.412	Amphiprion_percula
ENSRNOG00000006816	Ubr5	100	87.064	ENSATEG00000024796	ubr5	96	87.105	Anabas_testudineus
ENSRNOG00000006816	Ubr5	100	94.499	ENSAPLG00000004191	UBR5	88	94.458	Anas_platyrhynchos
ENSRNOG00000006816	Ubr5	100	93.563	ENSACAG00000008995	UBR5	100	93.686	Anolis_carolinensis
ENSRNOG00000006816	Ubr5	100	96.470	ENSANAG00000032305	UBR5	87	96.470	Aotus_nancymaae
ENSRNOG00000006816	Ubr5	100	86.832	ENSACLG00000011122	ubr5	87	86.367	Astatotilapia_calliptera
ENSRNOG00000006816	Ubr5	100	86.864	ENSAMXG00000020014	ubr5	96	86.905	Astyanax_mexicanus
ENSRNOG00000006816	Ubr5	100	96.547	ENSBTAG00000021209	UBR5	87	96.547	Bos_taurus
ENSRNOG00000006816	Ubr5	100	96.467	ENSCJAG00000015960	UBR5	87	96.467	Callithrix_jacchus
ENSRNOG00000006816	Ubr5	100	96.506	ENSCAFG00000000619	UBR5	100	96.359	Canis_familiaris
ENSRNOG00000006816	Ubr5	100	96.386	ENSCAFG00020000901	UBR5	87	96.386	Canis_lupus_dingo
ENSRNOG00000006816	Ubr5	100	96.547	ENSCHIG00000020937	UBR5	87	96.547	Capra_hircus
ENSRNOG00000006816	Ubr5	100	96.671	ENSTSYG00000011411	UBR5	87	96.671	Carlito_syrichta
ENSRNOG00000006816	Ubr5	95	90.744	ENSCPOG00000009637	UBR5	85	90.787	Cavia_porcellus
ENSRNOG00000006816	Ubr5	100	96.630	ENSCCAG00000037120	UBR5	87	96.630	Cebus_capucinus
ENSRNOG00000006816	Ubr5	100	96.511	ENSCATG00000035969	UBR5	87	96.511	Cercocebus_atys
ENSRNOG00000006816	Ubr5	100	95.643	ENSCLAG00000005604	UBR5	87	95.643	Chinchilla_lanigera
ENSRNOG00000006816	Ubr5	100	96.631	ENSCSAG00000011959	UBR5	87	96.631	Chlorocebus_sabaeus
ENSRNOG00000006816	Ubr5	82	100.000	ENSCHOG00000013701	UBR5	72	100.000	Choloepus_hoffmanni
ENSRNOG00000006816	Ubr5	100	95.356	ENSCPBG00000026166	UBR5	87	95.356	Chrysemys_picta_bellii
ENSRNOG00000006816	Ubr5	99	40.879	ENSCING00000008630	-	87	40.593	Ciona_intestinalis
ENSRNOG00000006816	Ubr5	100	96.631	ENSCANG00000041171	UBR5	100	95.434	Colobus_angolensis_palliatus
ENSRNOG00000006816	Ubr5	100	92.115	ENSCGRG00001002960	Ubr5	89	92.115	Cricetulus_griseus_chok1gshd
ENSRNOG00000006816	Ubr5	100	93.317	ENSCGRG00000005867	Ubr5	88	93.358	Cricetulus_griseus_crigri
ENSRNOG00000006816	Ubr5	100	86.180	ENSCSEG00000008448	ubr5	85	86.103	Cynoglossus_semilaevis
ENSRNOG00000006816	Ubr5	100	86.899	ENSCVAG00000021987	ubr5	96	86.940	Cyprinodon_variegatus
ENSRNOG00000006816	Ubr5	99	87.187	ENSDARG00000018192	ubr5	87	87.228	Danio_rerio
ENSRNOG00000006816	Ubr5	100	93.768	ENSDNOG00000007897	UBR5	87	93.768	Dasypus_novemcinctus
ENSRNOG00000006816	Ubr5	100	96.467	ENSDORG00000007058	Ubr5	87	96.467	Dipodomys_ordii
ENSRNOG00000006816	Ubr5	91	51.987	FBgn0002431	hyd	82	52.153	Drosophila_melanogaster
ENSRNOG00000006816	Ubr5	82	98.872	ENSETEG00000020339	UBR5	71	98.872	Echinops_telfairi
ENSRNOG00000006816	Ubr5	100	96.468	ENSEASG00005001629	UBR5	87	96.468	Equus_asinus_asinus
ENSRNOG00000006816	Ubr5	100	96.589	ENSECAG00000015755	UBR5	95	96.589	Equus_caballus
ENSRNOG00000006816	Ubr5	100	87.008	ENSELUG00000005362	ubr5	96	87.049	Esox_lucius
ENSRNOG00000006816	Ubr5	100	96.630	ENSFCAG00000011214	UBR5	87	96.630	Felis_catus
ENSRNOG00000006816	Ubr5	100	95.356	ENSFALG00000005901	UBR5	87	95.356	Ficedula_albicollis
ENSRNOG00000006816	Ubr5	100	95.850	ENSFDAG00000014793	UBR5	88	95.850	Fukomys_damarensis
ENSRNOG00000006816	Ubr5	100	86.823	ENSFHEG00000019770	ubr5	96	86.864	Fundulus_heteroclitus
ENSRNOG00000006816	Ubr5	100	86.935	ENSGMOG00000018440	ubr5	88	86.891	Gadus_morhua
ENSRNOG00000006816	Ubr5	100	93.259	ENSGALG00000031282	UBR5	87	93.013	Gallus_gallus
ENSRNOG00000006816	Ubr5	100	86.560	ENSGACG00000004642	ubr5	100	87.916	Gasterosteus_aculeatus
ENSRNOG00000006816	Ubr5	100	96.223	ENSGGOG00000003058	UBR5	86	96.223	Gorilla_gorilla
ENSRNOG00000006816	Ubr5	100	87.556	ENSHBUG00000021803	ubr5	100	87.598	Haplochromis_burtoni
ENSRNOG00000006816	Ubr5	100	95.890	ENSHGLG00000010405	UBR5	87	95.890	Heterocephalus_glaber_female
ENSRNOG00000006816	Ubr5	100	94.164	ENSHGLG00100004167	UBR5	87	94.164	Heterocephalus_glaber_male
ENSRNOG00000006816	Ubr5	100	86.224	ENSHCOG00000014022	ubr5	96	86.265	Hippocampus_comes
ENSRNOG00000006816	Ubr5	100	86.119	ENSIPUG00000023090	ubr5	100	86.160	Ictalurus_punctatus
ENSRNOG00000006816	Ubr5	100	96.589	ENSSTOG00000005328	UBR5	87	96.589	Ictidomys_tridecemlineatus
ENSRNOG00000006816	Ubr5	100	96.383	ENSJJAG00000013619	Ubr5	87	96.383	Jaculus_jaculus
ENSRNOG00000006816	Ubr5	100	87.110	ENSKMAG00000001452	ubr5	88	87.151	Kryptolebias_marmoratus
ENSRNOG00000006816	Ubr5	100	85.813	ENSLBEG00000024613	ubr5	87	85.738	Labrus_bergylta
ENSRNOG00000006816	Ubr5	100	92.238	ENSLACG00000012137	UBR5	88	92.049	Latimeria_chalumnae
ENSRNOG00000006816	Ubr5	100	89.865	ENSLOCG00000009882	ubr5	86	89.906	Lepisosteus_oculatus
ENSRNOG00000006816	Ubr5	100	96.631	ENSMFAG00000044216	UBR5	87	96.631	Macaca_fascicularis
ENSRNOG00000006816	Ubr5	100	96.630	ENSMMUG00000020766	UBR5	87	96.630	Macaca_mulatta
ENSRNOG00000006816	Ubr5	100	96.590	ENSMNEG00000028834	UBR5	87	96.590	Macaca_nemestrina
ENSRNOG00000006816	Ubr5	100	96.631	ENSMLEG00000039922	UBR5	100	95.479	Mandrillus_leucophaeus
ENSRNOG00000006816	Ubr5	100	87.515	ENSMZEG00005025460	ubr5	96	87.556	Maylandia_zebra
ENSRNOG00000006816	Ubr5	91	95.212	ENSMGAG00000012296	-	100	95.212	Meleagris_gallopavo
ENSRNOG00000006816	Ubr5	100	96.424	ENSMAUG00000018902	Ubr5	87	96.424	Mesocricetus_auratus
ENSRNOG00000006816	Ubr5	100	96.508	ENSMICG00000014824	UBR5	87	96.508	Microcebus_murinus
ENSRNOG00000006816	Ubr5	100	96.424	ENSMOCG00000019809	Ubr5	87	96.424	Microtus_ochrogaster
ENSRNOG00000006816	Ubr5	100	84.517	ENSMMOG00000018266	ubr5	96	84.764	Mola_mola
ENSRNOG00000006816	Ubr5	100	95.152	ENSMODG00000005976	UBR5	88	95.152	Monodelphis_domestica
ENSRNOG00000006816	Ubr5	100	86.500	ENSMALG00000008018	ubr5	96	86.459	Monopterus_albus
ENSRNOG00000006816	Ubr5	100	96.876	MGP_CAROLIEiJ_G0019748	Ubr5	87	96.876	Mus_caroli
ENSRNOG00000006816	Ubr5	100	97.000	ENSMUSG00000037487	Ubr5	87	97.000	Mus_musculus
ENSRNOG00000006816	Ubr5	100	96.917	MGP_PahariEiJ_G0019757	Ubr5	87	96.917	Mus_pahari
ENSRNOG00000006816	Ubr5	100	96.958	MGP_SPRETEiJ_G0020645	Ubr5	87	96.958	Mus_spretus
ENSRNOG00000006816	Ubr5	100	96.506	ENSMPUG00000015136	UBR5	96	96.506	Mustela_putorius_furo
ENSRNOG00000006816	Ubr5	100	96.189	ENSMLUG00000008052	UBR5	88	96.189	Myotis_lucifugus
ENSRNOG00000006816	Ubr5	100	96.794	ENSNGAG00000001915	Ubr5	87	96.794	Nannospalax_galili
ENSRNOG00000006816	Ubr5	100	87.054	ENSNBRG00000001982	ubr5	100	87.095	Neolamprologus_brichardi
ENSRNOG00000006816	Ubr5	100	96.549	ENSNLEG00000003404	UBR5	88	96.549	Nomascus_leucogenys
ENSRNOG00000006816	Ubr5	74	97.046	ENSMEUG00000004964	-	67	93.421	Notamacropus_eugenii
ENSRNOG00000006816	Ubr5	80	99.320	ENSOPRG00000004459	UBR5	70	99.320	Ochotona_princeps
ENSRNOG00000006816	Ubr5	100	95.479	ENSODEG00000001200	UBR5	87	95.479	Octodon_degus
ENSRNOG00000006816	Ubr5	100	87.295	ENSONIG00000016431	ubr5	87	87.336	Oreochromis_niloticus
ENSRNOG00000006816	Ubr5	100	95.725	ENSOANG00000013340	-	96	95.725	Ornithorhynchus_anatinus
ENSRNOG00000006816	Ubr5	100	95.117	ENSOCUG00000008549	UBR5	86	95.117	Oryctolagus_cuniculus
ENSRNOG00000006816	Ubr5	100	86.343	ENSORLG00000003009	ubr5	87	86.266	Oryzias_latipes
ENSRNOG00000006816	Ubr5	100	86.962	ENSORLG00020022466	ubr5	96	87.003	Oryzias_latipes_hni
ENSRNOG00000006816	Ubr5	100	87.197	ENSORLG00015012347	ubr5	86	87.238	Oryzias_latipes_hsok
ENSRNOG00000006816	Ubr5	89	85.714	ENSOMEG00000014794	ubr5	86	85.760	Oryzias_melastigma
ENSRNOG00000006816	Ubr5	100	96.385	ENSOGAG00000004491	UBR5	87	96.385	Otolemur_garnettii
ENSRNOG00000006816	Ubr5	100	96.547	ENSOARG00000017554	UBR5	86	96.547	Ovis_aries
ENSRNOG00000006816	Ubr5	100	94.698	ENSPPAG00000040534	UBR5	87	94.698	Pan_paniscus
ENSRNOG00000006816	Ubr5	100	96.630	ENSPPRG00000001290	UBR5	88	96.630	Panthera_pardus
ENSRNOG00000006816	Ubr5	100	95.931	ENSPTIG00000016223	UBR5	87	95.931	Panthera_tigris_altaica
ENSRNOG00000006816	Ubr5	100	96.465	ENSPTRG00000020482	UBR5	87	96.465	Pan_troglodytes
ENSRNOG00000006816	Ubr5	100	96.631	ENSPANG00000017236	UBR5	100	95.049	Papio_anubis
ENSRNOG00000006816	Ubr5	100	82.307	ENSPKIG00000016015	UBR5	96	81.258	Paramormyrops_kingsleyae
ENSRNOG00000006816	Ubr5	94	87.010	ENSPKIG00000005940	ubr5	95	87.446	Paramormyrops_kingsleyae
ENSRNOG00000006816	Ubr5	100	95.406	ENSPSIG00000013244	UBR5	100	95.406	Pelodiscus_sinensis
ENSRNOG00000006816	Ubr5	100	83.498	ENSPMGG00000022205	ubr5	87	83.539	Periophthalmus_magnuspinnatus
ENSRNOG00000006816	Ubr5	100	96.835	ENSPEMG00000020823	Ubr5	87	96.835	Peromyscus_maniculatus_bairdii
ENSRNOG00000006816	Ubr5	100	86.464	ENSPFOG00000012957	ubr5	95	86.386	Poecilia_formosa
ENSRNOG00000006816	Ubr5	100	86.735	ENSPLAG00000008530	ubr5	100	86.776	Poecilia_latipinna
ENSRNOG00000006816	Ubr5	100	85.216	ENSPMEG00000019322	ubr5	100	85.092	Poecilia_mexicana
ENSRNOG00000006816	Ubr5	100	86.423	ENSPREG00000016584	ubr5	87	86.345	Poecilia_reticulata
ENSRNOG00000006816	Ubr5	97	98.574	ENSPPYG00000018797	UBR5	88	98.574	Pongo_abelii
ENSRNOG00000006816	Ubr5	78	98.065	ENSPCAG00000001160	UBR5	68	98.065	Procavia_capensis
ENSRNOG00000006816	Ubr5	100	95.154	ENSPCOG00000014399	UBR5	87	95.154	Propithecus_coquereli
ENSRNOG00000006816	Ubr5	88	99.502	ENSPVAG00000012646	UBR5	77	99.502	Pteropus_vampyrus
ENSRNOG00000006816	Ubr5	100	87.305	ENSPNYG00000004164	ubr5	100	87.183	Pundamilia_nyererei
ENSRNOG00000006816	Ubr5	100	85.796	ENSPNAG00000001318	ubr5	96	85.920	Pygocentrus_nattereri
ENSRNOG00000006816	Ubr5	100	93.552	ENSRBIG00000038821	UBR5	100	93.552	Rhinopithecus_bieti
ENSRNOG00000006816	Ubr5	100	95.497	ENSRROG00000040919	UBR5	87	95.497	Rhinopithecus_roxellana
ENSRNOG00000006816	Ubr5	100	96.590	ENSSBOG00000025123	UBR5	87	96.590	Saimiri_boliviensis_boliviensis
ENSRNOG00000006816	Ubr5	100	95.361	ENSSHAG00000017701	UBR5	87	95.361	Sarcophilus_harrisii
ENSRNOG00000006816	Ubr5	100	86.524	ENSSFOG00015003412	ubr5	96	86.401	Scleropages_formosus
ENSRNOG00000006816	Ubr5	100	85.837	ENSSMAG00000010194	ubr5	96	85.878	Scophthalmus_maximus
ENSRNOG00000006816	Ubr5	100	86.940	ENSSDUG00000008072	ubr5	96	86.940	Seriola_dumerili
ENSRNOG00000006816	Ubr5	100	86.899	ENSSLDG00000013014	ubr5	96	86.899	Seriola_lalandi_dorsalis
ENSRNOG00000006816	Ubr5	90	99.245	ENSSARG00000000171	UBR5	79	99.245	Sorex_araneus
ENSRNOG00000006816	Ubr5	100	86.246	ENSSPAG00000015131	ubr5	96	86.287	Stegastes_partitus
ENSRNOG00000006816	Ubr5	100	96.547	ENSSSCG00000022479	UBR5	96	96.547	Sus_scrofa
ENSRNOG00000006816	Ubr5	100	95.113	ENSTGUG00000012099	UBR5	88	95.113	Taeniopygia_guttata
ENSRNOG00000006816	Ubr5	100	85.936	ENSTRUG00000010399	ubr5	96	85.859	Takifugu_rubripes
ENSRNOG00000006816	Ubr5	100	82.447	ENSTNIG00000013292	ubr5	88	82.570	Tetraodon_nigroviridis
ENSRNOG00000006816	Ubr5	91	100.000	ENSTBEG00000015656	UBR5	80	100.000	Tupaia_belangeri
ENSRNOG00000006816	Ubr5	85	98.413	ENSTTRG00000000492	UBR5	73	98.413	Tursiops_truncatus
ENSRNOG00000006816	Ubr5	100	95.893	ENSUMAG00000017960	UBR5	88	95.893	Ursus_maritimus
ENSRNOG00000006816	Ubr5	93	93.758	ENSVPAG00000008376	UBR5	84	93.758	Vicugna_pacos
ENSRNOG00000006816	Ubr5	100	96.386	ENSVVUG00000013461	UBR5	100	94.897	Vulpes_vulpes
ENSRNOG00000006816	Ubr5	100	91.913	ENSXETG00000031995	UBR5	87	92.159	Xenopus_tropicalis
ENSRNOG00000006816	Ubr5	86	85.502	ENSXCOG00000017034	ubr5	96	85.550	Xiphophorus_couchianus
ENSRNOG00000006816	Ubr5	100	86.571	ENSXMAG00000002429	ubr5	100	86.612	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000209	protein polyubiquitination	21873635.	IBA	Process
GO:0000209	protein polyubiquitination	-	ISO	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	12239083.	IDA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISS	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0010628	positive regulation of gene expression	-	IEA	Process
GO:0010628	positive regulation of gene expression	-	ISO	Process
GO:0016567	protein ubiquitination	12239083.	IDA	Process
GO:0019904	protein domain specific binding	16554297.	IDA	Function
GO:0031647	regulation of protein stability	-	ISO	Process
GO:0032991	protein-containing complex	-	IEA	Component
GO:0032991	protein-containing complex	-	ISO	Component
GO:0034450	ubiquitin-ubiquitin ligase activity	-	IEA	Function
GO:0034450	ubiquitin-ubiquitin ligase activity	-	ISO	Function
GO:0042307	positive regulation of protein import into nucleus	-	IEA	Process
GO:0042307	positive regulation of protein import into nucleus	-	ISO	Process
GO:0043130	ubiquitin binding	-	IEA	Function
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0050847	progesterone receptor signaling pathway	-	IEA	Process
GO:0050847	progesterone receptor signaling pathway	-	ISO	Process
GO:0061630	ubiquitin protein ligase activity	12239083.	IDA	Function
GO:0061630	ubiquitin protein ligase activity	7708685.	IMP	Function
GO:0061630	ubiquitin protein ligase activity	-	ISO	Function
GO:0070936	protein K48-linked ubiquitination	-	IEA	Process
GO:0070936	protein K48-linked ubiquitination	-	ISO	Process
GO:0090263	positive regulation of canonical Wnt signaling pathway	-	IEA	Process
GO:0090263	positive regulation of canonical Wnt signaling pathway	-	ISO	Process
GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	21873635.	IBA	Process
GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	-	IEA	Process
GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	-	ISO	Process
GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	-	ISS	Process
GO:1905077	negative regulation of interleukin-17 secretion	-	ISO	Process
GO:2000780	negative regulation of double-strand break repair	-	IEA	Process
GO:2000780	negative regulation of double-strand break repair	-	ISO	Process
GO:2000780	negative regulation of double-strand break repair	-	ISS	Process