EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000007088 (Gene tree)
Gene ID: 314879
Gene Symbol: Xpot
Alias: LOC314879
Full Name: exportin for tRNA
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 38936 bases
Position: chr7:63690053-63728988
Accession: 1305562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000009645	Xpo1	PF08389.12	1.2e-38	1	1
ENSRNOP00000009645	IBN_N	PF03810.19	2.1e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000009645	-	3510	XM_006241399	ENSRNOP00000009645	728 (aa)	XP_006241461	D3ZZ62

Gene Model

Click here to download ENSRNOG00000007088's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000007088	Xpot	92	92.708	ENSG00000184575	XPOT	100	98.333	Homo_sapiens
ENSRNOG00000007088	Xpot	92	75.298	ENSAPOG00000001362	xpot	95	72.148	Acanthochromis_polyacanthus
ENSRNOG00000007088	Xpot	92	92.262	ENSAMEG00000018109	XPOT	69	92.262	Ailuropoda_melanoleuca
ENSRNOG00000007088	Xpot	92	75.298	ENSACIG00000009016	xpot	69	75.298	Amphilophus_citrinellus
ENSRNOG00000007088	Xpot	92	75.149	ENSAOCG00000005711	xpot	68	75.149	Amphiprion_ocellaris
ENSRNOG00000007088	Xpot	92	75.298	ENSAPEG00000024660	XPOT	73	75.298	Amphiprion_percula
ENSRNOG00000007088	Xpot	77	77.660	ENSAPEG00000024714	xpot	98	77.660	Amphiprion_percula
ENSRNOG00000007088	Xpot	92	75.298	ENSATEG00000000675	xpot	68	75.298	Anabas_testudineus
ENSRNOG00000007088	Xpot	92	87.946	ENSAPLG00000008073	XPOT	69	87.946	Anas_platyrhynchos
ENSRNOG00000007088	Xpot	92	83.482	ENSACAG00000003154	XPOT	69	83.482	Anolis_carolinensis
ENSRNOG00000007088	Xpot	99	75.137	ENSANAG00000029914	-	97	75.687	Aotus_nancymaae
ENSRNOG00000007088	Xpot	99	82.019	ENSANAG00000032778	-	97	82.019	Aotus_nancymaae
ENSRNOG00000007088	Xpot	92	75.000	ENSACLG00000008404	xpot	68	75.000	Astatotilapia_calliptera
ENSRNOG00000007088	Xpot	92	75.446	ENSAMXG00000013542	xpot	68	75.446	Astyanax_mexicanus
ENSRNOG00000007088	Xpot	92	92.708	ENSBTAG00000026962	XPOT	69	92.708	Bos_taurus
ENSRNOG00000007088	Xpot	92	92.560	ENSCJAG00000014762	XPOT	65	92.560	Callithrix_jacchus
ENSRNOG00000007088	Xpot	92	93.006	ENSCAFG00000000352	XPOT	69	93.006	Canis_familiaris
ENSRNOG00000007088	Xpot	92	93.006	ENSCAFG00020019527	XPOT	69	93.006	Canis_lupus_dingo
ENSRNOG00000007088	Xpot	92	93.006	ENSCHIG00000018310	XPOT	69	93.006	Capra_hircus
ENSRNOG00000007088	Xpot	92	91.369	ENSTSYG00000008852	XPOT	69	91.369	Carlito_syrichta
ENSRNOG00000007088	Xpot	80	92.440	ENSCAPG00000001620	XPOT	66	92.440	Cavia_aperea
ENSRNOG00000007088	Xpot	92	92.411	ENSCPOG00000027042	XPOT	69	92.411	Cavia_porcellus
ENSRNOG00000007088	Xpot	92	89.355	ENSCCAG00000035803	XPOT	97	93.939	Cebus_capucinus
ENSRNOG00000007088	Xpot	92	62.537	ENSCATG00000039901	-	65	61.791	Cercocebus_atys
ENSRNOG00000007088	Xpot	92	92.857	ENSCATG00000037826	XPOT	69	92.857	Cercocebus_atys
ENSRNOG00000007088	Xpot	92	92.262	ENSCLAG00000011382	XPOT	69	92.262	Chinchilla_lanigera
ENSRNOG00000007088	Xpot	92	92.857	ENSCSAG00000004475	XPOT	69	92.857	Chlorocebus_sabaeus
ENSRNOG00000007088	Xpot	92	86.905	ENSCPBG00000001003	XPOT	69	86.905	Chrysemys_picta_bellii
ENSRNOG00000007088	Xpot	92	43.101	ENSCSAVG00000001681	-	70	43.101	Ciona_savignyi
ENSRNOG00000007088	Xpot	92	92.708	ENSCANG00000033371	XPOT	69	92.708	Colobus_angolensis_palliatus
ENSRNOG00000007088	Xpot	89	65.123	ENSCANG00000030844	-	67	66.358	Colobus_angolensis_palliatus
ENSRNOG00000007088	Xpot	92	96.280	ENSCGRG00001016835	Xpot	69	96.280	Cricetulus_griseus_chok1gshd
ENSRNOG00000007088	Xpot	92	95.982	ENSCGRG00000000577	Xpot	69	95.982	Cricetulus_griseus_crigri
ENSRNOG00000007088	Xpot	92	73.810	ENSCSEG00000003973	xpot	68	73.810	Cynoglossus_semilaevis
ENSRNOG00000007088	Xpot	92	74.256	ENSCVAG00000020453	xpot	68	74.256	Cyprinodon_variegatus
ENSRNOG00000007088	Xpot	92	74.405	ENSDARG00000099652	xpot	68	74.405	Danio_rerio
ENSRNOG00000007088	Xpot	92	93.155	ENSDORG00000000259	Xpot	69	93.155	Dipodomys_ordii
ENSRNOG00000007088	Xpot	82	59.098	ENSEBUG00000007650	xpot	68	59.359	Eptatretus_burgeri
ENSRNOG00000007088	Xpot	92	92.262	ENSEASG00005007701	XPOT	67	92.262	Equus_asinus_asinus
ENSRNOG00000007088	Xpot	92	92.560	ENSECAG00000018336	XPOT	67	92.560	Equus_caballus
ENSRNOG00000007088	Xpot	73	85.553	ENSEEUG00000009700	XPOT	55	85.553	Erinaceus_europaeus
ENSRNOG00000007088	Xpot	75	71.461	ENSELUG00000009337	xpot	96	75.824	Esox_lucius
ENSRNOG00000007088	Xpot	92	92.708	ENSFCAG00000012360	XPOT	69	92.708	Felis_catus
ENSRNOG00000007088	Xpot	92	87.798	ENSFALG00000009938	XPOT	69	87.798	Ficedula_albicollis
ENSRNOG00000007088	Xpot	92	92.411	ENSFDAG00000012640	XPOT	69	92.411	Fukomys_damarensis
ENSRNOG00000007088	Xpot	70	70.920	ENSFHEG00000009648	xpot	63	70.920	Fundulus_heteroclitus
ENSRNOG00000007088	Xpot	92	67.552	ENSGMOG00000018888	xpot	69	67.552	Gadus_morhua
ENSRNOG00000007088	Xpot	92	88.244	ENSGALG00000009835	XPOT	69	88.244	Gallus_gallus
ENSRNOG00000007088	Xpot	92	74.405	ENSGAFG00000004150	xpot	68	74.405	Gambusia_affinis
ENSRNOG00000007088	Xpot	92	69.219	ENSGACG00000000589	xpot	69	69.219	Gasterosteus_aculeatus
ENSRNOG00000007088	Xpot	92	86.905	ENSGAGG00000022917	XPOT	69	86.905	Gopherus_agassizii
ENSRNOG00000007088	Xpot	100	77.913	ENSGGOG00000027170	-	84	79.972	Gorilla_gorilla
ENSRNOG00000007088	Xpot	92	92.708	ENSGGOG00000006089	XPOT	69	92.708	Gorilla_gorilla
ENSRNOG00000007088	Xpot	92	75.149	ENSHBUG00000020681	xpot	68	75.149	Haplochromis_burtoni
ENSRNOG00000007088	Xpot	92	92.560	ENSHGLG00000005833	XPOT	69	92.560	Heterocephalus_glaber_female
ENSRNOG00000007088	Xpot	92	92.560	ENSHGLG00100000810	XPOT	72	92.560	Heterocephalus_glaber_male
ENSRNOG00000007088	Xpot	92	68.750	ENSHCOG00000006415	xpot	97	67.606	Hippocampus_comes
ENSRNOG00000007088	Xpot	92	75.149	ENSIPUG00000015271	xpot	69	75.149	Ictalurus_punctatus
ENSRNOG00000007088	Xpot	92	93.006	ENSSTOG00000021805	XPOT	69	93.006	Ictidomys_tridecemlineatus
ENSRNOG00000007088	Xpot	93	77.696	ENSJJAG00000014767	-	69	78.838	Jaculus_jaculus
ENSRNOG00000007088	Xpot	92	88.542	ENSJJAG00000019671	-	68	88.542	Jaculus_jaculus
ENSRNOG00000007088	Xpot	92	74.405	ENSKMAG00000019126	xpot	73	74.405	Kryptolebias_marmoratus
ENSRNOG00000007088	Xpot	92	73.661	ENSLBEG00000000178	xpot	69	73.512	Labrus_bergylta
ENSRNOG00000007088	Xpot	92	79.822	ENSLACG00000014355	XPOT	69	79.822	Latimeria_chalumnae
ENSRNOG00000007088	Xpot	92	81.426	ENSLOCG00000016512	xpot	69	81.426	Lepisosteus_oculatus
ENSRNOG00000007088	Xpot	92	91.964	ENSLAFG00000009829	XPOT	69	91.964	Loxodonta_africana
ENSRNOG00000007088	Xpot	92	67.164	ENSMFAG00000038180	-	66	67.164	Macaca_fascicularis
ENSRNOG00000007088	Xpot	92	92.857	ENSMFAG00000032644	XPOT	98	89.882	Macaca_fascicularis
ENSRNOG00000007088	Xpot	89	69.894	ENSMMUG00000021196	-	66	71.451	Macaca_mulatta
ENSRNOG00000007088	Xpot	92	92.857	ENSMMUG00000007659	XPOT	69	92.857	Macaca_mulatta
ENSRNOG00000007088	Xpot	92	61.194	ENSMNEG00000029730	-	64	61.194	Macaca_nemestrina
ENSRNOG00000007088	Xpot	92	92.857	ENSMNEG00000033875	XPOT	98	89.882	Macaca_nemestrina
ENSRNOG00000007088	Xpot	92	89.881	ENSMLEG00000043977	XPOT	69	89.881	Mandrillus_leucophaeus
ENSRNOG00000007088	Xpot	92	74.107	ENSMAMG00000020690	xpot	68	74.107	Mastacembelus_armatus
ENSRNOG00000007088	Xpot	92	74.702	ENSMZEG00005018955	xpot	68	74.702	Maylandia_zebra
ENSRNOG00000007088	Xpot	92	88.113	ENSMGAG00000010208	XPOT	69	88.113	Meleagris_gallopavo
ENSRNOG00000007088	Xpot	92	96.577	ENSMAUG00000016836	Xpot	69	96.577	Mesocricetus_auratus
ENSRNOG00000007088	Xpot	92	93.155	ENSMICG00000012001	XPOT	69	93.155	Microcebus_murinus
ENSRNOG00000007088	Xpot	92	95.685	ENSMOCG00000014097	Xpot	69	95.685	Microtus_ochrogaster
ENSRNOG00000007088	Xpot	92	74.851	ENSMMOG00000005960	xpot	67	74.851	Mola_mola
ENSRNOG00000007088	Xpot	92	75.298	ENSMALG00000007523	xpot	69	74.405	Monopterus_albus
ENSRNOG00000007088	Xpot	92	97.173	MGP_CAROLIEiJ_G0015858	Xpot	69	97.173	Mus_caroli
ENSRNOG00000007088	Xpot	92	97.173	ENSMUSG00000034667	Xpot	100	83.333	Mus_musculus
ENSRNOG00000007088	Xpot	92	97.173	MGP_PahariEiJ_G0031228	Xpot	69	97.173	Mus_pahari
ENSRNOG00000007088	Xpot	93	97.033	MGP_SPRETEiJ_G0016683	Xpot	73	97.751	Mus_spretus
ENSRNOG00000007088	Xpot	92	93.006	ENSMPUG00000017529	XPOT	69	93.006	Mustela_putorius_furo
ENSRNOG00000007088	Xpot	92	93.006	ENSMLUG00000009664	XPOT	69	93.006	Myotis_lucifugus
ENSRNOG00000007088	Xpot	92	93.750	ENSNGAG00000020615	Xpot	69	93.750	Nannospalax_galili
ENSRNOG00000007088	Xpot	92	75.149	ENSNBRG00000017136	xpot	68	75.149	Neolamprologus_brichardi
ENSRNOG00000007088	Xpot	92	92.857	ENSNLEG00000017052	XPOT	69	92.857	Nomascus_leucogenys
ENSRNOG00000007088	Xpot	71	93.306	ENSOPRG00000013079	XPOT	50	93.306	Ochotona_princeps
ENSRNOG00000007088	Xpot	92	91.964	ENSODEG00000004607	XPOT	69	91.964	Octodon_degus
ENSRNOG00000007088	Xpot	92	75.446	ENSONIG00000007471	xpot	68	75.446	Oreochromis_niloticus
ENSRNOG00000007088	Xpot	92	89.137	ENSOANG00000010932	XPOT	69	89.137	Ornithorhynchus_anatinus
ENSRNOG00000007088	Xpot	92	92.262	ENSOCUG00000012126	XPOT	66	92.262	Oryctolagus_cuniculus
ENSRNOG00000007088	Xpot	92	73.363	ENSORLG00000020105	xpot	68	73.363	Oryzias_latipes
ENSRNOG00000007088	Xpot	92	73.363	ENSORLG00020003770	xpot	68	73.363	Oryzias_latipes_hni
ENSRNOG00000007088	Xpot	92	71.875	ENSORLG00015003002	xpot	68	71.875	Oryzias_latipes_hsok
ENSRNOG00000007088	Xpot	92	71.852	ENSOMEG00000021300	xpot	69	71.852	Oryzias_melastigma
ENSRNOG00000007088	Xpot	92	79.762	ENSOGAG00000004952	XPOT	69	79.762	Otolemur_garnettii
ENSRNOG00000007088	Xpot	92	93.006	ENSOARG00000003504	XPOT	70	93.006	Ovis_aries
ENSRNOG00000007088	Xpot	100	72.900	ENSPPAG00000041601	-	84	74.894	Pan_paniscus
ENSRNOG00000007088	Xpot	92	92.708	ENSPPAG00000031361	XPOT	69	92.708	Pan_paniscus
ENSRNOG00000007088	Xpot	88	71.607	ENSPPAG00000040981	-	69	71.607	Pan_paniscus
ENSRNOG00000007088	Xpot	92	92.857	ENSPPRG00000005552	XPOT	69	92.857	Panthera_pardus
ENSRNOG00000007088	Xpot	92	92.857	ENSPTIG00000022072	XPOT	66	92.857	Panthera_tigris_altaica
ENSRNOG00000007088	Xpot	92	92.708	ENSPTRG00000005173	XPOT	69	92.708	Pan_troglodytes
ENSRNOG00000007088	Xpot	79	83.296	ENSPTRG00000046749	-	69	83.296	Pan_troglodytes
ENSRNOG00000007088	Xpot	100	74.422	ENSPTRG00000045368	-	76	74.422	Pan_troglodytes
ENSRNOG00000007088	Xpot	79	83.521	ENSPTRG00000049416	-	69	83.521	Pan_troglodytes
ENSRNOG00000007088	Xpot	92	88.988	ENSPANG00000030915	-	98	90.169	Papio_anubis
ENSRNOG00000007088	Xpot	92	92.857	ENSPANG00000001024	-	69	92.857	Papio_anubis
ENSRNOG00000007088	Xpot	92	79.315	ENSPKIG00000001935	xpot	69	79.315	Paramormyrops_kingsleyae
ENSRNOG00000007088	Xpot	92	87.202	ENSPSIG00000007346	XPOT	69	87.202	Pelodiscus_sinensis
ENSRNOG00000007088	Xpot	78	75.442	ENSPMGG00000016668	xpot	91	75.442	Periophthalmus_magnuspinnatus
ENSRNOG00000007088	Xpot	92	95.982	ENSPEMG00000002538	Xpot	69	95.982	Peromyscus_maniculatus_bairdii
ENSRNOG00000007088	Xpot	56	64.634	ENSPMAG00000000201	xpot	100	64.634	Petromyzon_marinus
ENSRNOG00000007088	Xpot	92	90.327	ENSPCIG00000029686	XPOT	71	90.327	Phascolarctos_cinereus
ENSRNOG00000007088	Xpot	92	74.405	ENSPFOG00000002834	xpot	68	74.405	Poecilia_formosa
ENSRNOG00000007088	Xpot	92	74.405	ENSPLAG00000017684	xpot	68	74.405	Poecilia_latipinna
ENSRNOG00000007088	Xpot	92	74.554	ENSPMEG00000006259	xpot	68	74.554	Poecilia_mexicana
ENSRNOG00000007088	Xpot	92	72.552	ENSPREG00000018505	xpot	68	72.552	Poecilia_reticulata
ENSRNOG00000007088	Xpot	92	92.560	ENSPPYG00000004727	XPOT	69	92.560	Pongo_abelii
ENSRNOG00000007088	Xpot	75	95.706	ENSPCAG00000001574	XPOT	57	95.706	Procavia_capensis
ENSRNOG00000007088	Xpot	92	93.155	ENSPCOG00000028383	XPOT	69	93.155	Propithecus_coquereli
ENSRNOG00000007088	Xpot	92	92.113	ENSPVAG00000008199	XPOT	69	92.113	Pteropus_vampyrus
ENSRNOG00000007088	Xpot	92	75.149	ENSPNYG00000022747	xpot	68	75.149	Pundamilia_nyererei
ENSRNOG00000007088	Xpot	92	75.298	ENSPNAG00000009140	xpot	68	75.298	Pygocentrus_nattereri
ENSRNOG00000007088	Xpot	92	92.857	ENSRBIG00000041353	XPOT	69	92.857	Rhinopithecus_bieti
ENSRNOG00000007088	Xpot	92	69.940	ENSRBIG00000032079	-	65	69.940	Rhinopithecus_bieti
ENSRNOG00000007088	Xpot	92	92.857	ENSRROG00000038276	XPOT	69	92.857	Rhinopithecus_roxellana
ENSRNOG00000007088	Xpot	92	92.560	ENSSBOG00000024782	XPOT	69	92.560	Saimiri_boliviensis_boliviensis
ENSRNOG00000007088	Xpot	92	90.327	ENSSHAG00000007043	XPOT	69	90.327	Sarcophilus_harrisii
ENSRNOG00000007088	Xpot	92	77.679	ENSSFOG00015000827	xpot	69	77.679	Scleropages_formosus
ENSRNOG00000007088	Xpot	92	72.321	ENSSMAG00000005164	xpot	73	69.252	Scophthalmus_maximus
ENSRNOG00000007088	Xpot	92	75.000	ENSSDUG00000012514	xpot	68	75.000	Seriola_dumerili
ENSRNOG00000007088	Xpot	92	74.851	ENSSLDG00000019497	xpot	68	74.851	Seriola_lalandi_dorsalis
ENSRNOG00000007088	Xpot	70	72.491	ENSSARG00000005789	XPOT	55	72.491	Sorex_araneus
ENSRNOG00000007088	Xpot	92	85.714	ENSSPUG00000009837	XPOT	69	85.714	Sphenodon_punctatus
ENSRNOG00000007088	Xpot	92	92.708	ENSSSCG00000000466	XPOT	96	93.522	Sus_scrofa
ENSRNOG00000007088	Xpot	92	87.649	ENSTGUG00000006459	XPOT	69	87.649	Taeniopygia_guttata
ENSRNOG00000007088	Xpot	92	69.764	ENSTNIG00000002483	xpot	69	69.764	Tetraodon_nigroviridis
ENSRNOG00000007088	Xpot	78	96.970	ENSTBEG00000009738	XPOT	59	96.970	Tupaia_belangeri
ENSRNOG00000007088	Xpot	92	92.857	ENSTTRG00000016808	XPOT	69	92.857	Tursiops_truncatus
ENSRNOG00000007088	Xpot	92	92.708	ENSUAMG00000017168	XPOT	69	92.708	Ursus_americanus
ENSRNOG00000007088	Xpot	92	92.708	ENSUMAG00000020382	XPOT	69	92.708	Ursus_maritimus
ENSRNOG00000007088	Xpot	92	91.964	ENSVPAG00000004244	XPOT	69	91.964	Vicugna_pacos
ENSRNOG00000007088	Xpot	92	93.006	ENSVVUG00000015001	XPOT	69	93.006	Vulpes_vulpes
ENSRNOG00000007088	Xpot	92	81.250	ENSXETG00000021668	xpot	69	81.250	Xenopus_tropicalis
ENSRNOG00000007088	Xpot	92	72.511	ENSXCOG00000011945	xpot	69	72.511	Xiphophorus_couchianus
ENSRNOG00000007088	Xpot	92	74.256	ENSXMAG00000002827	xpot	68	74.256	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0000049	tRNA binding	-	ISO	Function
GO:0005643	nuclear pore	21873635.	IBA	Component
GO:0005643	nuclear pore	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006409	tRNA export from nucleus	-	ISO	Process
GO:0008536	Ran GTPase binding	21873635.	IBA	Function
GO:0016363	nuclear matrix	21873635.	IBA	Component
GO:0071528	tRNA re-export from nucleus	21873635.	IBA	Process